RNA–Protein interactions for RNA: ENST00000614014.1

PRICKLE3-208, Transcript of prickle planar cell polarity protein 3, humanhuman

TSL 3

Gene PRICKLE3, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3-208ENST00000614014 NISCHQ9Y2I1 1504 aa47.52■■■■■ 5.2
PRICKLE3-208ENST00000614014 CCDC180Q9P1Z9 1646 aa42.04■■■■■ 4.32
PRICKLE3-208ENST00000614014 ABCC9O60706 1549 aa40.85■■■■■ 4.13
PRICKLE3-208ENST00000614014 ZCCHC6Q5VYS8 1495 aaKnown RBP39.67■■■■□ 3.94
PRICKLE3-208ENST00000614014 DCAF8L2P0C7V8 631 aa39.52■■■■□ 3.92
PRICKLE3-208ENST00000614014 NACADO15069 1562 aa39.46■■■■□ 3.91
PRICKLE3-208ENST00000614014 RB1CC1Q8TDY2 1594 aa39.41■■■■□ 3.9
PRICKLE3-208ENST00000614014 MYO15BQ96JP2 1530 aa39.38■■■■□ 3.89
PRICKLE3-208ENST00000614014 DCAF1Q9Y4B6 1507 aa39.34■■■■□ 3.89
PRICKLE3-208ENST00000614014 UNC13AQ9UPW8 1703 aa38.52■■■■□ 3.76
PRICKLE3-208ENST00000614014 SCRIBQ14160 1630 aa38.39■■■■□ 3.74
PRICKLE3-208ENST00000614014 BICRAQ9NZM4 1560 aa38.28■■■■□ 3.72
PRICKLE3-208ENST00000614014 PABPN1Q86U42 306 aaKnown RBP eCLIP38.26■■■■□ 3.72
PRICKLE3-208ENST00000614014 SHROOM4Q9ULL8 1493 aa37.85■■■■□ 3.65
PRICKLE3-208ENST00000614014 DNAJC5BQ9UF47 199 aa37.28■■■■□ 3.56
PRICKLE3-208ENST00000614014 EIF4G1Q04637 1599 aaKnown RBP37.21■■■■□ 3.55
PRICKLE3-208ENST00000614014 CECR2Q9BXF3 1484 aa37.01■■■■□ 3.52
PRICKLE3-208ENST00000614014 CC2D2AQ9P2K1 1620 aa36.96■■■■□ 3.51
PRICKLE3-208ENST00000614014 SMARCA4P51532 1647 aa36.77■■■■□ 3.48
PRICKLE3-208ENST00000614014 BAZ1AQ9NRL2 1556 aaPredicted RBP36.77■■■■□ 3.48
PRICKLE3-208ENST00000614014 MROH2BQ7Z745 1585 aa36.65■■■■□ 3.46
PRICKLE3-208ENST00000614014 ATAD2BQ9ULI0 1458 aa36.53■■■■□ 3.44
PRICKLE3-208ENST00000614014 NCAPD3P42695 1498 aa36.46■■■■□ 3.43
PRICKLE3-208ENST00000614014 SMARCA2P51531 1590 aa36.44■■■■□ 3.42
PRICKLE3-208ENST00000614014 PEG3Q9GZU2 1588 aa36.44■■■■□ 3.42
PRICKLE3-208ENST00000614014 RSF1Q96T23 1441 aaPredicted RBP36.36■■■■□ 3.41
PRICKLE3-208ENST00000614014 HMGXB3Q12766 1538 aa36.28■■■■□ 3.4
PRICKLE3-208ENST00000614014 WIZO95785 1651 aa36.23■■■■□ 3.39
PRICKLE3-208ENST00000614014 BAZ1BQ9UIG0 1483 aaKnown RBP36.2■■■■□ 3.39
PRICKLE3-208ENST00000614014 TOP2AP11388 1531 aaKnown RBP35.87■■■■□ 3.33
PRICKLE3-208ENST00000614014 SUPT5HO00267 1087 aaKnown RBP35.65■■■■□ 3.3
PRICKLE3-208ENST00000614014 NESP48681 1621 aa35.48■■■■□ 3.27
PRICKLE3-208ENST00000614014 CCDC88BA6NC98 1476 aa35.48■■■■□ 3.27
PRICKLE3-208ENST00000614014 CADPSQ9ULU8 1353 aa35.41■■■■□ 3.26
PRICKLE3-208ENST00000614014 LAMC3Q9Y6N6 1575 aa35.39■■■■□ 3.26
PRICKLE3-208ENST00000614014 CFTRP13569 1480 aa35.28■■■■□ 3.24
PRICKLE3-208ENST00000614014 PDS5BQ9NTI5 1447 aa35.15■■■■□ 3.22
PRICKLE3-208ENST00000614014 ERCC6Q03468 1493 aa35.13■■■■□ 3.21
PRICKLE3-208ENST00000614014 KIF21AQ7Z4S6 1674 aa35.01■■■■□ 3.19
PRICKLE3-208ENST00000614014 FANCD2Q9BXW9 1451 aa34.97■■■■□ 3.19
PRICKLE3-208ENST00000614014 PRDM2Q13029 1718 aa34.93■■■■□ 3.18
PRICKLE3-208ENST00000614014 CEP164Q9UPV0 1460 aa34.88■■■■□ 3.17
PRICKLE3-208ENST00000614014 THOC2Q8NI27 1593 aaKnown RBP34.84■■■■□ 3.17
PRICKLE3-208ENST00000614014 MRC2Q9UBG0 1479 aa34.78■■■■□ 3.16
PRICKLE3-208ENST00000614014 CUX2O14529 1486 aa34.67■■■■□ 3.14
PRICKLE3-208ENST00000614014 WDR62O43379 1518 aa34.66■■■■□ 3.14
PRICKLE3-208ENST00000614014 URB2Q14146 1524 aaKnown RBP34.63■■■■□ 3.13
PRICKLE3-208ENST00000614014 TOPBP1Q92547 1522 aa34.46■■■■□ 3.11
PRICKLE3-208ENST00000614014 ABCC8Q09428 1581 aa34.45■■■■□ 3.1
PRICKLE3-208ENST00000614014 DNMBPQ6XZF7 1577 aa34.44■■■■□ 3.1
PRICKLE3-208ENST00000614014 CUX1P39880 1505 aa34.35■■■■□ 3.09
PRICKLE3-208ENST00000614014 WRNQ14191 1432 aaPredicted RBP eCLIP34.23■■■■□ 3.07
PRICKLE3-208ENST00000614014 POLA1P09884 1462 aaPredicted RBP34.2■■■■□ 3.07
PRICKLE3-208ENST00000614014 FGD5Q6ZNL6 1462 aa34.16■■■■□ 3.06
PRICKLE3-208ENST00000614014 IFT140Q96RY7 1462 aa34.15■■■■□ 3.06
PRICKLE3-208ENST00000614014 SYNJ1O43426 1573 aa34.14■■■■□ 3.06
PRICKLE3-208ENST00000614014 TOP2BQ02880 1626 aa34.12■■■■□ 3.05
PRICKLE3-208ENST00000614014 BIVM-ERCC5R4GMW8 1640 aa34.1■■■■□ 3.05
PRICKLE3-208ENST00000614014 TARBP1Q13395 1621 aaKnown RBP34.07■■■■□ 3.04
PRICKLE3-208ENST00000614014 RAD54L2Q9Y4B4 1467 aa34.07■■■■□ 3.04
PRICKLE3-208ENST00000614014 SOGA1O94964 1423 aa34.06■■■■□ 3.04
PRICKLE3-208ENST00000614014 ZNF608Q9ULD9 1512 aaPredicted RBP34■■■■□ 3.03
PRICKLE3-208ENST00000614014 ABCA10Q8WWZ4 1543 aa33.85■■■■□ 3.01
PRICKLE3-208ENST00000614014 AQRO60306 1485 aaKnown RBP eCLIP33.85■■■■□ 3.018e-7■■■■■ 26.8
PRICKLE3-208ENST00000614014 TDRD9Q8NDG6 1382 aaKnown RBP33.85■■■■□ 3.01
PRICKLE3-208ENST00000614014 WDR97A6NE52 1622 aa33.84■■■■□ 3.01
PRICKLE3-208ENST00000614014 EIF4G3O43432 1585 aaKnown RBP33.84■■■■□ 3.01
PRICKLE3-208ENST00000614014 ABCA5Q8WWZ7 1642 aa33.68■■■□□ 2.98
PRICKLE3-208ENST00000614014 GAPVD1Q14C86 1478 aa33.67■■■□□ 2.98
PRICKLE3-208ENST00000614014 TRIM41Q8WV44 630 aa33.65■■■□□ 2.98
PRICKLE3-208ENST00000614014 GRIN2BQ13224 1484 aa33.61■■■□□ 2.97
PRICKLE3-208ENST00000614014 PBRM1Q86U86 1689 aa33.52■■■□□ 2.96
PRICKLE3-208ENST00000614014 SNAPC4Q5SXM2 1469 aa33.52■■■□□ 2.96
PRICKLE3-208ENST00000614014 CHIC1Q5VXU3 224 aa33.52■■■□□ 2.96
PRICKLE3-208ENST00000614014 KIF27Q86VH2 1401 aa33.48■■■□□ 2.95
PRICKLE3-208ENST00000614014 MAGI1Q96QZ7 1491 aaPredicted RBP33.48■■■□□ 2.95
PRICKLE3-208ENST00000614014 ERICH3Q5RHP9 1530 aa33.43■■■□□ 2.94
PRICKLE3-208ENST00000614014 IGF1RP08069 1367 aa33.36■■■□□ 2.93
PRICKLE3-208ENST00000614014 SYNJ2O15056 1496 aa33.36■■■□□ 2.93
PRICKLE3-208ENST00000614014 RUSC2Q8N2Y8 1516 aa33.34■■■□□ 2.93
PRICKLE3-208ENST00000614014 CHD1O14646 1710 aa33.32■■■□□ 2.92
PRICKLE3-208ENST00000614014 ADAMTS12P58397 1594 aa33.32■■■□□ 2.92
PRICKLE3-208ENST00000614014 FBLN2P98095 1184 aa33.32■■■□□ 2.92
PRICKLE3-208ENST00000614014 OSCARQ8IYS5 282 aa33.32■■■□□ 2.92
PRICKLE3-208ENST00000614014 CHMP7Q8WUX9 453 aaPredicted RBP33.3■■■□□ 2.92
PRICKLE3-208ENST00000614014 FHAD1B1AJZ9 1412 aa33.29■■■□□ 2.92
PRICKLE3-208ENST00000614014 DNAJC5Q9H3Z4 198 aa33.26■■■□□ 2.91
PRICKLE3-208ENST00000614014 GRIN2AQ12879 1464 aa33.18■■■□□ 2.9
PRICKLE3-208ENST00000614014 CUL7Q14999 1698 aa33.16■■■□□ 2.9
PRICKLE3-208ENST00000614014 CARMIL1Q5VZK9 1371 aa33.14■■■□□ 2.9
PRICKLE3-208ENST00000614014 NUP160Q12769 1436 aa33.05■■■□□ 2.88
PRICKLE3-208ENST00000614014 EEA1Q15075 1411 aa33.05■■■□□ 2.88
PRICKLE3-208ENST00000614014 CLASP1Q7Z460 1538 aa33.02■■■□□ 2.88
PRICKLE3-208ENST00000614014 CEP170Q5SW79 1584 aa33.01■■■□□ 2.88
PRICKLE3-208ENST00000614014 CSRNP3Q8WYN3 585 aa33■■■□□ 2.87
PRICKLE3-208ENST00000614014 PRXQ9BXM0 1461 aa32.98■■■□□ 2.87
PRICKLE3-208ENST00000614014 RAPGEF2Q9Y4G8 1499 aa32.96■■■□□ 2.87
PRICKLE3-208ENST00000614014 FAM9AQ8IZU1 332 aaPredicted RBP32.94■■■□□ 2.86
PRICKLE3-208ENST00000614014 KIAA0586Q9BVV6 1533 aa32.8■■■□□ 2.84
PRICKLE3-208ENST00000614014 ARHGEF11O15085 1522 aa32.77■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms