RNA–Protein interactions for RNA: ENST00000612669.1

AC116003.3-201, humanhuman

BASIC

Gene AC116003.3, Length 541 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC116003.3-201ENST00000612669 AEBP2Q6ZN18 517 aaPredicted RBP22.37■■□□□ 1.17
AC116003.3-201ENST00000612669 CHIC1Q5VXU3 224 aa22.12■■□□□ 1.13
AC116003.3-201ENST00000612669 PHF23Q9BUL5 403 aaPredicted RBP19.45■□□□□ 0.7
AC116003.3-201ENST00000612669 SENP3Q9H4L4 574 aaPredicted RBP19■□□□□ 0.63
AC116003.3-201ENST00000612669 NISCHQ9Y2I1 1504 aa18.58■□□□□ 0.56
AC116003.3-201ENST00000612669 PLPPR3Q6T4P5 718 aa18.07■□□□□ 0.48
AC116003.3-201ENST00000612669 FOXD1Q16676 465 aa17.57■□□□□ 0.4
AC116003.3-201ENST00000612669 ABCC9O60706 1549 aa17.32■□□□□ 0.36
AC116003.3-201ENST00000612669 PPP6R1Q9UPN7 881 aa17.07■□□□□ 0.32
AC116003.3-201ENST00000612669 ADRA2BP18089 450 aa17.05■□□□□ 0.32
AC116003.3-201ENST00000612669 CCDC180Q9P1Z9 1646 aa16.96■□□□□ 0.31
AC116003.3-201ENST00000612669 PIAS4Q8N2W9 510 aaPredicted RBP16.61■□□□□ 0.25
AC116003.3-201ENST00000612669 DNAJC5BQ9UF47 199 aa16.55■□□□□ 0.24
AC116003.3-201ENST00000612669 RB1CC1Q8TDY2 1594 aa16.39■□□□□ 0.21
AC116003.3-201ENST00000612669 NACADO15069 1562 aa16.16■□□□□ 0.18
AC116003.3-201ENST00000612669 MSH5O43196 834 aa16.15■□□□□ 0.18
AC116003.3-201ENST00000612669 PABPN1Q86U42 306 aaKnown RBP eCLIP16.01■□□□□ 0.15
AC116003.3-201ENST00000612669 PPP4R3CPQ6ZMV5 832 aa15.93■□□□□ 0.14
AC116003.3-201ENST00000612669 DCAF8L2P0C7V8 631 aa15.91■□□□□ 0.14
AC116003.3-201ENST00000612669 UNC13AQ9UPW8 1703 aa15.91■□□□□ 0.14
AC116003.3-201ENST00000612669 KCNA4P22459 653 aa15.8■□□□□ 0.12
AC116003.3-201ENST00000612669 MYO15BQ96JP2 1530 aa15.78■□□□□ 0.12
AC116003.3-201ENST00000612669 BICRAQ9NZM4 1560 aa15.78■□□□□ 0.12
AC116003.3-201ENST00000612669 SHROOM4Q9ULL8 1493 aa15.72■□□□□ 0.11
AC116003.3-201ENST00000612669 DNAJC5Q9H3Z4 198 aa15.7■□□□□ 0.1
AC116003.3-201ENST00000612669 CECR2Q9BXF3 1484 aa15.7■□□□□ 0.1
AC116003.3-201ENST00000612669 SCAF1Q9H7N4 1312 aaKnown RBP15.67■□□□□ 0.1
AC116003.3-201ENST00000612669 CC2D2AQ9P2K1 1620 aa15.65■□□□□ 0.1
AC116003.3-201ENST00000612669 NCBP3Q53F19 620 aaKnown RBP15.6■□□□□ 0.09
AC116003.3-201ENST00000612669 EIF4G1Q04637 1599 aaKnown RBP15.5■□□□□ 0.07
AC116003.3-201ENST00000612669 CNKSR2Q8WXI2 1034 aa15.46■□□□□ 0.07
AC116003.3-201ENST00000612669 DCAF1Q9Y4B6 1507 aa15.38■□□□□ 0.05
AC116003.3-201ENST00000612669 MAPK8IP2Q13387 824 aaPredicted RBP15.38■□□□□ 0.05
AC116003.3-201ENST00000612669 NPM3O75607 178 aaKnown RBP15.35■□□□□ 0.05
AC116003.3-201ENST00000612669 SCRIBQ14160 1630 aa15.33■□□□□ 0.04
AC116003.3-201ENST00000612669 ZCCHC6Q5VYS8 1495 aaKnown RBP15.29■□□□□ 0.04
AC116003.3-201ENST00000612669 CUX2O14529 1486 aa15.24■□□□□ 0.03
AC116003.3-201ENST00000612669 DMRT2Q9Y5R5 561 aa15.21■□□□□ 0.03
AC116003.3-201ENST00000612669 RNF216Q9NWF9 866 aaPredicted RBP15.11■□□□□ 0.01
AC116003.3-201ENST00000612669 ERCC6Q03468 1493 aa15.1■□□□□ 0.01
AC116003.3-201ENST00000612669 SLC4A1APQ9BWU0 796 aaKnown RBP15.09■□□□□ 0.01
AC116003.3-201ENST00000612669 HOXD11P31277 338 aaPredicted RBP14.99□□□□□ -0.01
AC116003.3-201ENST00000612669 EHMT2Q96KQ7 1210 aa14.87□□□□□ -0.03
AC116003.3-201ENST00000612669 NCAPD3P42695 1498 aa14.87□□□□□ -0.03
AC116003.3-201ENST00000612669 TRIM41Q8WV44 630 aa14.82□□□□□ -0.04
AC116003.3-201ENST00000612669 SMARCA2P51531 1590 aa14.75□□□□□ -0.05
AC116003.3-201ENST00000612669 HMGXB3Q12766 1538 aa14.75□□□□□ -0.05
AC116003.3-201ENST00000612669 ATAD2BQ9ULI0 1458 aa14.72□□□□□ -0.05
AC116003.3-201ENST00000612669 THOC2Q8NI27 1593 aaKnown RBP14.69□□□□□ -0.06
AC116003.3-201ENST00000612669 NESP48681 1621 aa14.69□□□□□ -0.06
AC116003.3-201ENST00000612669 CSRNP3Q8WYN3 585 aa14.67□□□□□ -0.06
AC116003.3-201ENST00000612669 LAMC3Q9Y6N6 1575 aa14.66□□□□□ -0.06
AC116003.3-201ENST00000612669 PDS5BQ9NTI5 1447 aa14.62□□□□□ -0.07
AC116003.3-201ENST00000612669 BAZ1BQ9UIG0 1483 aaKnown RBP14.61□□□□□ -0.07
AC116003.3-201ENST00000612669 SMARCA4P51532 1647 aa14.6□□□□□ -0.07
AC116003.3-201ENST00000612669 KIF21AQ7Z4S6 1674 aa14.55□□□□□ -0.08
AC116003.3-201ENST00000612669 ZBTB22O15209 634 aa14.53□□□□□ -0.08
AC116003.3-201ENST00000612669 BAZ1AQ9NRL2 1556 aaPredicted RBP14.51□□□□□ -0.09
AC116003.3-201ENST00000612669 FOXD4L1Q9NU39 408 aa14.51□□□□□ -0.09
AC116003.3-201ENST00000612669 PEG3Q9GZU2 1588 aa14.48□□□□□ -0.09
AC116003.3-201ENST00000612669 MRC2Q9UBG0 1479 aa14.47□□□□□ -0.09
AC116003.3-201ENST00000612669 OSCARQ8IYS5 282 aa14.46□□□□□ -0.09
AC116003.3-201ENST00000612669 SLC4A2P04920 1241 aa14.44□□□□□ -0.1
AC116003.3-201ENST00000612669 DCAF8L1A6NGE4 600 aa14.43□□□□□ -0.1
AC116003.3-201ENST00000612669 WDR62O43379 1518 aa14.42□□□□□ -0.1
AC116003.3-201ENST00000612669 CADPSQ9ULU8 1353 aa14.4□□□□□ -0.1
AC116003.3-201ENST00000612669 CEP164Q9UPV0 1460 aa14.33□□□□□ -0.12
AC116003.3-201ENST00000612669 POTEDQ86YR6 584 aa14.25□□□□□ -0.13
AC116003.3-201ENST00000612669 RIMBP3CA6NJZ7 1639 aa14.25□□□□□ -0.13
AC116003.3-201ENST00000612669 RIMBP3BA6NNM3 1639 aa14.25□□□□□ -0.13
AC116003.3-201ENST00000612669 RIMBP3Q9UFD9 1639 aa14.25□□□□□ -0.13
AC116003.3-201ENST00000612669 MROH2BQ7Z745 1585 aa14.25□□□□□ -0.13
AC116003.3-201ENST00000612669 FANCD2Q9BXW9 1451 aa14.24□□□□□ -0.13
AC116003.3-201ENST00000612669 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.23□□□□□ -0.13
AC116003.3-201ENST00000612669 MYCNP04198 464 aaPredicted RBP14.2□□□□□ -0.14
AC116003.3-201ENST00000612669 ARHGEF11O15085 1522 aa14.16□□□□□ -0.14
AC116003.3-201ENST00000612669 TRHP20396 242 aaPredicted RBP14.15□□□□□ -0.14
AC116003.3-201ENST00000612669 CFTRP13569 1480 aa14.12□□□□□ -0.15
AC116003.3-201ENST00000612669 CYB5RLQ6IPT4 315 aa14.09□□□□□ -0.15
AC116003.3-201ENST00000612669 URB2Q14146 1524 aaKnown RBP14.08□□□□□ -0.16
AC116003.3-201ENST00000612669 WIZO95785 1651 aa14.07□□□□□ -0.16
AC116003.3-201ENST00000612669 IFT140Q96RY7 1462 aa14.06□□□□□ -0.16
AC116003.3-201ENST00000612669 U3KPZ7 1027 aaPredicted RBP14.05□□□□□ -0.16
AC116003.3-201ENST00000612669 ATXN8OSP0DMR3 200 aa14.03□□□□□ -0.16
AC116003.3-201ENST00000612669 PRDM2Q13029 1718 aa14.01□□□□□ -0.17
AC116003.3-201ENST00000612669 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14□□□□□ -0.17
AC116003.3-201ENST00000612669 HNRNPUL2Q1KMD3 747 aaKnown RBP14□□□□□ -0.17
AC116003.3-201ENST00000612669 RSF1Q96T23 1441 aaPredicted RBP13.98□□□□□ -0.17
AC116003.3-201ENST00000612669 ZNF608Q9ULD9 1512 aaPredicted RBP13.97□□□□□ -0.17
AC116003.3-201ENST00000612669 ARAP1Q96P48 1450 aa13.96□□□□□ -0.17
AC116003.3-201ENST00000612669 ABCC8Q09428 1581 aa13.96□□□□□ -0.18
AC116003.3-201ENST00000612669 SAMD1Q6SPF0 538 aaPredicted RBP13.94□□□□□ -0.18
AC116003.3-201ENST00000612669 EIF4G3O43432 1585 aaKnown RBP13.93□□□□□ -0.18
AC116003.3-201ENST00000612669 TOP2AP11388 1531 aaKnown RBP13.93□□□□□ -0.18
AC116003.3-201ENST00000612669 CHD1O14646 1710 aa13.93□□□□□ -0.18
AC116003.3-201ENST00000612669 TOPBP1Q92547 1522 aa13.9□□□□□ -0.19
AC116003.3-201ENST00000612669 HRCP23327 699 aa13.89□□□□□ -0.19
AC116003.3-201ENST00000612669 FBLN2P98095 1184 aa13.89□□□□□ -0.19
AC116003.3-201ENST00000612669 RNF39Q9H2S5 420 aa13.85□□□□□ -0.19
AC116003.3-201ENST00000612669 DNMBPQ6XZF7 1577 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms