RNA–Protein interactions for RNA: ENST00000612478.4

R3HCC1L-205, Transcript of R3H domain and coiled-coil containing 1 like, humanhuman

TSL 5 BASIC

Gene R3HCC1L, Length 3,337 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1L-205ENST00000612478 NISCHQ9Y2I1 1504 aa10.19□□□□□ -0.78
R3HCC1L-205ENST00000612478 CCDC180Q9P1Z9 1646 aa9.26□□□□□ -0.93
R3HCC1L-205ENST00000612478 MYO15BQ96JP2 1530 aa8.79□□□□□ -1
R3HCC1L-205ENST00000612478 DCAF1Q9Y4B6 1507 aa8.7□□□□□ -1.02
R3HCC1L-205ENST00000612478 ZCCHC6Q5VYS8 1495 aaKnown RBP8.56□□□□□ -1.04
R3HCC1L-205ENST00000612478 NACADO15069 1562 aa8.52□□□□□ -1.05
R3HCC1L-205ENST00000612478 SHROOM4Q9ULL8 1493 aa8.46□□□□□ -1.05
R3HCC1L-205ENST00000612478 RB1CC1Q8TDY2 1594 aa8.43□□□□□ -1.06
R3HCC1L-205ENST00000612478 ABCC9O60706 1549 aa8.4□□□□□ -1.06
R3HCC1L-205ENST00000612478 UNC13AQ9UPW8 1703 aa8.24□□□□□ -1.09
R3HCC1L-205ENST00000612478 AEBP2Q6ZN18 517 aaPredicted RBP8.22□□□□□ -1.09
R3HCC1L-205ENST00000612478 BICRAQ9NZM4 1560 aa8.12□□□□□ -1.11
R3HCC1L-205ENST00000612478 SCRIBQ14160 1630 aa8.07□□□□□ -1.12
R3HCC1L-205ENST00000612478 PEG3Q9GZU2 1588 aa8□□□□□ -1.13
R3HCC1L-205ENST00000612478 DCAF8L2P0C7V8 631 aa7.99□□□□□ -1.13
R3HCC1L-205ENST00000612478 BAZ1AQ9NRL2 1556 aaPredicted RBP7.92□□□□□ -1.14
R3HCC1L-205ENST00000612478 SMARCA4P51532 1647 aa7.88□□□□□ -1.15
R3HCC1L-205ENST00000612478 EIF4G1Q04637 1599 aaKnown RBP7.87□□□□□ -1.15
R3HCC1L-205ENST00000612478 SMARCA2P51531 1590 aa7.86□□□□□ -1.15
R3HCC1L-205ENST00000612478 HMGXB3Q12766 1538 aa7.85□□□□□ -1.15
R3HCC1L-205ENST00000612478 PRDM2Q13029 1718 aa7.83□□□□□ -1.16
R3HCC1L-205ENST00000612478 NCAPD3P42695 1498 aa7.8□□□□□ -1.16
R3HCC1L-205ENST00000612478 CC2D2AQ9P2K1 1620 aa7.76□□□□□ -1.17
R3HCC1L-205ENST00000612478 CECR2Q9BXF3 1484 aa7.76□□□□□ -1.17
R3HCC1L-205ENST00000612478 MROH2BQ7Z745 1585 aa7.75□□□□□ -1.17
R3HCC1L-205ENST00000612478 ATAD2BQ9ULI0 1458 aa7.75□□□□□ -1.17
R3HCC1L-205ENST00000612478 PABPN1Q86U42 306 aaKnown RBP eCLIP7.75□□□□□ -1.17
R3HCC1L-205ENST00000612478 RSF1Q96T23 1441 aaPredicted RBP7.74□□□□□ -1.17
R3HCC1L-205ENST00000612478 TOP2AP11388 1531 aaKnown RBP7.74□□□□□ -1.17
R3HCC1L-205ENST00000612478 WIZO95785 1651 aa7.67□□□□□ -1.18
R3HCC1L-205ENST00000612478 BAZ1BQ9UIG0 1483 aaKnown RBP7.67□□□□□ -1.18
R3HCC1L-205ENST00000612478 SUPT5HO00267 1087 aaKnown RBP7.6□□□□□ -1.19
R3HCC1L-205ENST00000612478 LAMC3Q9Y6N6 1575 aa7.6□□□□□ -1.19
R3HCC1L-205ENST00000612478 WDR97A6NE52 1622 aa7.58□□□□□ -1.2
R3HCC1L-205ENST00000612478 CHIC1Q5VXU3 224 aa7.57□□□□□ -1.2
R3HCC1L-205ENST00000612478 CFTRP13569 1480 aa7.54□□□□□ -1.2
R3HCC1L-205ENST00000612478 CCDC88BA6NC98 1476 aa7.52□□□□□ -1.2
R3HCC1L-205ENST00000612478 CADPSQ9ULU8 1353 aa7.49□□□□□ -1.21
R3HCC1L-205ENST00000612478 DNAJC5BQ9UF47 199 aa7.48□□□□□ -1.21
R3HCC1L-205ENST00000612478 ABCC8Q09428 1581 aa7.47□□□□□ -1.21
R3HCC1L-205ENST00000612478 PDS5BQ9NTI5 1447 aa7.45□□□□□ -1.22
R3HCC1L-205ENST00000612478 HRCP23327 699 aa7.43□□□□□ -1.22
R3HCC1L-205ENST00000612478 BIVM-ERCC5R4GMW8 1640 aa7.42□□□□□ -1.22
R3HCC1L-205ENST00000612478 WDR62O43379 1518 aa7.41□□□□□ -1.22
R3HCC1L-205ENST00000612478 THOC2Q8NI27 1593 aaKnown RBP7.4□□□□□ -1.22
R3HCC1L-205ENST00000612478 PELP1Q8IZL8 1130 aaKnown RBP7.39□□□□□ -1.23
R3HCC1L-205ENST00000612478 KIF21AQ7Z4S6 1674 aa7.39□□□□□ -1.23
R3HCC1L-205ENST00000612478 DNMBPQ6XZF7 1577 aa7.39□□□□□ -1.23
R3HCC1L-205ENST00000612478 CEP164Q9UPV0 1460 aa7.39□□□□□ -1.23
R3HCC1L-205ENST00000612478 FANCD2Q9BXW9 1451 aa7.38□□□□□ -1.23
R3HCC1L-205ENST00000612478 MRC2Q9UBG0 1479 aa7.38□□□□□ -1.23
R3HCC1L-205ENST00000612478 CUX2O14529 1486 aa7.37□□□□□ -1.23
R3HCC1L-205ENST00000612478 TOP2BQ02880 1626 aa7.37□□□□□ -1.23
R3HCC1L-205ENST00000612478 NESP48681 1621 aa7.33□□□□□ -1.24
R3HCC1L-205ENST00000612478 TOPBP1Q92547 1522 aa7.31□□□□□ -1.24
R3HCC1L-205ENST00000612478 URB2Q14146 1524 aaKnown RBP7.3□□□□□ -1.24
R3HCC1L-205ENST00000612478 CUX1P39880 1505 aa7.29□□□□□ -1.24
R3HCC1L-205ENST00000612478 WRNQ14191 1432 aaPredicted RBP eCLIP7.29□□□□□ -1.24
R3HCC1L-205ENST00000612478 IFT140Q96RY7 1462 aa7.28□□□□□ -1.24
R3HCC1L-205ENST00000612478 TARBP1Q13395 1621 aaKnown RBP7.28□□□□□ -1.24
R3HCC1L-205ENST00000612478 ERCC6Q03468 1493 aa7.28□□□□□ -1.24
R3HCC1L-205ENST00000612478 ABCA10Q8WWZ4 1543 aa7.27□□□□□ -1.25
R3HCC1L-205ENST00000612478 SYNJ1O43426 1573 aa7.27□□□□□ -1.25
R3HCC1L-205ENST00000612478 EEA1Q15075 1411 aa7.26□□□□□ -1.25
R3HCC1L-205ENST00000612478 ABCA5Q8WWZ7 1642 aa7.25□□□□□ -1.25
R3HCC1L-205ENST00000612478 POLA1P09884 1462 aaPredicted RBP7.24□□□□□ -1.25
R3HCC1L-205ENST00000612478 ERICH3Q5RHP9 1530 aa7.22□□□□□ -1.25
R3HCC1L-205ENST00000612478 FGD5Q6ZNL6 1462 aa7.22□□□□□ -1.25
R3HCC1L-205ENST00000612478 CUL7Q14999 1698 aa7.21□□□□□ -1.25
R3HCC1L-205ENST00000612478 PBRM1Q86U86 1689 aa7.19□□□□□ -1.26
R3HCC1L-205ENST00000612478 MYT1Q01538 1121 aa7.19□□□□□ -1.26
R3HCC1L-205ENST00000612478 MAGI1Q96QZ7 1491 aaPredicted RBP7.17□□□□□ -1.26
R3HCC1L-205ENST00000612478 EIF4G3O43432 1585 aaKnown RBP7.17□□□□□ -1.26
R3HCC1L-205ENST00000612478 SOGA1O94964 1423 aa7.17□□□□□ -1.26
R3HCC1L-205ENST00000612478 KIF27Q86VH2 1401 aa7.15□□□□□ -1.26
R3HCC1L-205ENST00000612478 GRIN2BQ13224 1484 aa7.15□□□□□ -1.26
R3HCC1L-205ENST00000612478 KIF21BO75037 1637 aa7.15□□□□□ -1.27
R3HCC1L-205ENST00000612478 ADAMTS12P58397 1594 aa7.14□□□□□ -1.27
R3HCC1L-205ENST00000612478 GAPVD1Q14C86 1478 aa7.12□□□□□ -1.27
R3HCC1L-205ENST00000612478 TRIM41Q8WV44 630 aa7.11□□□□□ -1.27
R3HCC1L-205ENST00000612478 FHAD1B1AJZ9 1412 aa7.1□□□□□ -1.27
R3HCC1L-205ENST00000612478 PRXQ9BXM0 1461 aa7.1□□□□□ -1.27
R3HCC1L-205ENST00000612478 SYNJ2O15056 1496 aa7.09□□□□□ -1.27
R3HCC1L-205ENST00000612478 RAD54L2Q9Y4B4 1467 aa7.09□□□□□ -1.27
R3HCC1L-205ENST00000612478 SHROOM2Q13796 1616 aa7.06□□□□□ -1.28
R3HCC1L-205ENST00000612478 ZNF608Q9ULD9 1512 aaPredicted RBP7.06□□□□□ -1.28
R3HCC1L-205ENST00000612478 IGF1RP08069 1367 aa7.06□□□□□ -1.28
R3HCC1L-205ENST00000612478 CTTNBP2Q8WZ74 1663 aa7.06□□□□□ -1.28
R3HCC1L-205ENST00000612478 NUP160Q12769 1436 aa7.06□□□□□ -1.28
R3HCC1L-205ENST00000612478 RAPGEF2Q9Y4G8 1499 aa7.05□□□□□ -1.28
R3HCC1L-205ENST00000612478 CLASP1Q7Z460 1538 aa7.05□□□□□ -1.28
R3HCC1L-205ENST00000612478 GRIN2AQ12879 1464 aa7.04□□□□□ -1.28
R3HCC1L-205ENST00000612478 CHD1O14646 1710 aa7.04□□□□□ -1.28
R3HCC1L-205ENST00000612478 SNAPC4Q5SXM2 1469 aa7.04□□□□□ -1.28
R3HCC1L-205ENST00000612478 FAM9AQ8IZU1 332 aaPredicted RBP7.04□□□□□ -1.28
R3HCC1L-205ENST00000612478 RUSC2Q8N2Y8 1516 aa7.02□□□□□ -1.28
R3HCC1L-205ENST00000612478 SCAF1Q9H7N4 1312 aaKnown RBP7.02□□□□□ -1.29
R3HCC1L-205ENST00000612478 LOC105371045A0A1W2PR82 267 aa7.02□□□□□ -1.29
R3HCC1L-205ENST00000612478 AQRO60306 1485 aaKnown RBP eCLIP7.01□□□□□ -1.29
R3HCC1L-205ENST00000612478 GOLGA3Q08378 1498 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms