RNA–Protein interactions for RNA: ENST00000612060.1

SCN5A-214, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 5 BASIC

Gene SCN5A, Length 714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-214ENST00000612060 NISCHQ9Y2I1 1504 aa43.1■■■■■ 4.49
SCN5A-214ENST00000612060 CCDC180Q9P1Z9 1646 aa38.71■■■■□ 3.79
SCN5A-214ENST00000612060 ABCC9O60706 1549 aa38.55■■■■□ 3.76
SCN5A-214ENST00000612060 RB1CC1Q8TDY2 1594 aa36.83■■■■□ 3.49
SCN5A-214ENST00000612060 NACADO15069 1562 aa36.57■■■■□ 3.44
SCN5A-214ENST00000612060 DCAF8L2P0C7V8 631 aa36.45■■■■□ 3.43
SCN5A-214ENST00000612060 MYO15BQ96JP2 1530 aa36.07■■■■□ 3.36
SCN5A-214ENST00000612060 DNAJC5BQ9UF47 199 aa35.88■■■■□ 3.33
SCN5A-214ENST00000612060 PABPN1Q86U42 306 aaKnown RBP eCLIP35.87■■■■□ 3.33
SCN5A-214ENST00000612060 UNC13AQ9UPW8 1703 aa35.86■■■■□ 3.33
SCN5A-214ENST00000612060 ZCCHC6Q5VYS8 1495 aaKnown RBP35.74■■■■□ 3.31
SCN5A-214ENST00000612060 DCAF1Q9Y4B6 1507 aa35.63■■■■□ 3.29
SCN5A-214ENST00000612060 BICRAQ9NZM4 1560 aa35.56■■■■□ 3.28
SCN5A-214ENST00000612060 SHROOM4Q9ULL8 1493 aa35.3■■■■□ 3.24
SCN5A-214ENST00000612060 SCRIBQ14160 1630 aa35.25■■■■□ 3.23
SCN5A-214ENST00000612060 CC2D2AQ9P2K1 1620 aa34.82■■■■□ 3.16
SCN5A-214ENST00000612060 EIF4G1Q04637 1599 aaKnown RBP34.79■■■■□ 3.16
SCN5A-214ENST00000612060 CECR2Q9BXF3 1484 aa34.75■■■■□ 3.15
SCN5A-214ENST00000612060 NCAPD3P42695 1498 aa33.69■■■□□ 2.98
SCN5A-214ENST00000612060 SMARCA4P51532 1647 aa33.62■■■□□ 2.97
SCN5A-214ENST00000612060 SMARCA2P51531 1590 aa33.62■■■□□ 2.97
SCN5A-214ENST00000612060 ATAD2BQ9ULI0 1458 aa33.6■■■□□ 2.97
SCN5A-214ENST00000612060 BAZ1AQ9NRL2 1556 aaPredicted RBP33.53■■■□□ 2.96
SCN5A-214ENST00000612060 HMGXB3Q12766 1538 aa33.51■■■□□ 2.95
SCN5A-214ENST00000612060 ERCC6Q03468 1493 aa33.41■■■□□ 2.94
SCN5A-214ENST00000612060 BAZ1BQ9UIG0 1483 aaKnown RBP33.37■■■□□ 2.93
SCN5A-214ENST00000612060 PEG3Q9GZU2 1588 aa33.27■■■□□ 2.92
SCN5A-214ENST00000612060 CUX2O14529 1486 aa33.25■■■□□ 2.91
SCN5A-214ENST00000612060 MROH2BQ7Z745 1585 aa33.17■■■□□ 2.9
SCN5A-214ENST00000612060 NESP48681 1621 aa33.08■■■□□ 2.89
SCN5A-214ENST00000612060 DNAJC5Q9H3Z4 198 aa33.02■■■□□ 2.88
SCN5A-214ENST00000612060 LAMC3Q9Y6N6 1575 aa32.99■■■□□ 2.87
SCN5A-214ENST00000612060 PDS5BQ9NTI5 1447 aa32.83■■■□□ 2.85
SCN5A-214ENST00000612060 WIZO95785 1651 aa32.8■■■□□ 2.84
SCN5A-214ENST00000612060 THOC2Q8NI27 1593 aaKnown RBP32.76■■■□□ 2.84
SCN5A-214ENST00000612060 KIF21AQ7Z4S6 1674 aa32.72■■■□□ 2.83
SCN5A-214ENST00000612060 CADPSQ9ULU8 1353 aa32.7■■■□□ 2.83
SCN5A-214ENST00000612060 RSF1Q96T23 1441 aaPredicted RBP32.53■■■□□ 2.8
SCN5A-214ENST00000612060 MRC2Q9UBG0 1479 aa32.5■■■□□ 2.79
SCN5A-214ENST00000612060 TOP2AP11388 1531 aaKnown RBP32.46■■■□□ 2.79
SCN5A-214ENST00000612060 CEP164Q9UPV0 1460 aa32.42■■■□□ 2.78
SCN5A-214ENST00000612060 WDR62O43379 1518 aa32.37■■■□□ 2.77
SCN5A-214ENST00000612060 FANCD2Q9BXW9 1451 aa32.35■■■□□ 2.77
SCN5A-214ENST00000612060 CFTRP13569 1480 aa32.33■■■□□ 2.77
SCN5A-214ENST00000612060 PRDM2Q13029 1718 aa32.09■■■□□ 2.73
SCN5A-214ENST00000612060 CCDC88BA6NC98 1476 aa32.03■■■□□ 2.72
SCN5A-214ENST00000612060 URB2Q14146 1524 aaKnown RBP32■■■□□ 2.71
SCN5A-214ENST00000612060 ABCC8Q09428 1581 aa31.77■■■□□ 2.68
SCN5A-214ENST00000612060 OSCARQ8IYS5 282 aa31.76■■■□□ 2.67
SCN5A-214ENST00000612060 IFT140Q96RY7 1462 aa31.76■■■□□ 2.67
SCN5A-214ENST00000612060 TOPBP1Q92547 1522 aa31.72■■■□□ 2.67
SCN5A-214ENST00000612060 TRIM41Q8WV44 630 aa31.71■■■□□ 2.67
SCN5A-214ENST00000612060 DNMBPQ6XZF7 1577 aa31.65■■■□□ 2.66
SCN5A-214ENST00000612060 ZNF608Q9ULD9 1512 aaPredicted RBP31.58■■■□□ 2.65
SCN5A-214ENST00000612060 EIF4G3O43432 1585 aaKnown RBP31.49■■■□□ 2.63
SCN5A-214ENST00000612060 POLA1P09884 1462 aaPredicted RBP31.4■■■□□ 2.62
SCN5A-214ENST00000612060 TARBP1Q13395 1621 aaKnown RBP31.39■■■□□ 2.62
SCN5A-214ENST00000612060 AQRO60306 1485 aaKnown RBP eCLIP31.34■■■□□ 2.61
SCN5A-214ENST00000612060 SOGA1O94964 1423 aa31.3■■■□□ 2.6
SCN5A-214ENST00000612060 SUPT5HO00267 1087 aaKnown RBP31.28■■■□□ 2.6
SCN5A-214ENST00000612060 RIMBP3CA6NJZ7 1639 aa31.26■■■□□ 2.59
SCN5A-214ENST00000612060 RIMBP3BA6NNM3 1639 aa31.26■■■□□ 2.59
SCN5A-214ENST00000612060 RIMBP3Q9UFD9 1639 aa31.26■■■□□ 2.59
SCN5A-214ENST00000612060 FBLN2P98095 1184 aa31.25■■■□□ 2.59
SCN5A-214ENST00000612060 RAD54L2Q9Y4B4 1467 aa31.25■■■□□ 2.59
SCN5A-214ENST00000612060 FGD5Q6ZNL6 1462 aa31.24■■■□□ 2.59
SCN5A-214ENST00000612060 CHD1O14646 1710 aa31.24■■■□□ 2.59
SCN5A-214ENST00000612060 WDR97A6NE52 1622 aa31.21■■■□□ 2.59
SCN5A-214ENST00000612060 ARHGEF11O15085 1522 aa31.19■■■□□ 2.58
SCN5A-214ENST00000612060 TDRD9Q8NDG6 1382 aaKnown RBP31.18■■■□□ 2.58
SCN5A-214ENST00000612060 CUX1P39880 1505 aa31.18■■■□□ 2.58
SCN5A-214ENST00000612060 SNAPC4Q5SXM2 1469 aa31.07■■■□□ 2.56
SCN5A-214ENST00000612060 MAGI1Q96QZ7 1491 aaPredicted RBP31.04■■■□□ 2.56
SCN5A-214ENST00000612060 GRIN2BQ13224 1484 aa31.03■■■□□ 2.56
SCN5A-214ENST00000612060 CHMP7Q8WUX9 453 aaPredicted RBP31.03■■■□□ 2.56
SCN5A-214ENST00000612060 CYB5RLQ6IPT4 315 aa30.97■■■□□ 2.55
SCN5A-214ENST00000612060 SYNJ1O43426 1573 aa30.96■■■□□ 2.55
SCN5A-214ENST00000612060 GAPVD1Q14C86 1478 aa30.93■■■□□ 2.54
SCN5A-214ENST00000612060 SYNJ2O15056 1496 aa30.92■■■□□ 2.54
SCN5A-214ENST00000612060 PBRM1Q86U86 1689 aa30.91■■■□□ 2.54
SCN5A-214ENST00000612060 ABCA10Q8WWZ4 1543 aa30.89■■■□□ 2.54
SCN5A-214ENST00000612060 ARAP1Q96P48 1450 aa30.85■■■□□ 2.53
SCN5A-214ENST00000612060 WRNQ14191 1432 aaPredicted RBP eCLIP30.85■■■□□ 2.53
SCN5A-214ENST00000612060 CLASP1Q7Z460 1538 aa30.83■■■□□ 2.53
SCN5A-214ENST00000612060 ABCA5Q8WWZ7 1642 aa30.81■■■□□ 2.52
SCN5A-214ENST00000612060 TOP2BQ02880 1626 aa30.76■■■□□ 2.52
SCN5A-214ENST00000612060 BIVM-ERCC5R4GMW8 1640 aa30.76■■■□□ 2.51
SCN5A-214ENST00000612060 TRHP20396 242 aaPredicted RBP30.69■■■□□ 2.5
SCN5A-214ENST00000612060 GRIN2AQ12879 1464 aa30.61■■■□□ 2.49
SCN5A-214ENST00000612060 ADAMTS12P58397 1594 aa30.61■■■□□ 2.49
SCN5A-214ENST00000612060 FHAD1B1AJZ9 1412 aa30.55■■■□□ 2.48
SCN5A-214ENST00000612060 ERICH3Q5RHP9 1530 aa30.54■■■□□ 2.48
SCN5A-214ENST00000612060 NUP160Q12769 1436 aa30.47■■■□□ 2.47
SCN5A-214ENST00000612060 CEP170Q5SW79 1584 aa30.45■■■□□ 2.46
SCN5A-214ENST00000612060 SHROOM2Q13796 1616 aa30.32■■■□□ 2.44
SCN5A-214ENST00000612060 ERCC6L2Q5T890 1561 aa30.29■■■□□ 2.44
SCN5A-214ENST00000612060 KIF27Q86VH2 1401 aa30.23■■■□□ 2.43
SCN5A-214ENST00000612060 PRG4Q92954 1404 aaPredicted RBP30.22■■■□□ 2.43
SCN5A-214ENST00000612060 JPH4Q96JJ6 628 aa30.18■■■□□ 2.42
SCN5A-214ENST00000612060 RUSC2Q8N2Y8 1516 aa30.17■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 181 ms