RNA–Protein interactions for RNA: ENST00000611452.4

AC239809.3-208, humanhuman

TSL 5 BASIC

Gene AC239809.3, Length 531 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC239809.3-208ENST00000611452 AEBP2Q6ZN18 517 aaPredicted RBP16.86■□□□□ 0.29
AC239809.3-208ENST00000611452 CHIC1Q5VXU3 224 aa15.87■□□□□ 0.13
AC239809.3-208ENST00000611452 SENP3Q9H4L4 574 aaPredicted RBP14.39□□□□□ -0.11
AC239809.3-208ENST00000611452 PHF23Q9BUL5 403 aaPredicted RBP14.21□□□□□ -0.13
AC239809.3-208ENST00000611452 FOXD1Q16676 465 aa13.45□□□□□ -0.26
AC239809.3-208ENST00000611452 MSH5O43196 834 aa12.62□□□□□ -0.39
AC239809.3-208ENST00000611452 PLPPR3Q6T4P5 718 aa12.61□□□□□ -0.39
AC239809.3-208ENST00000611452 POTEDQ86YR6 584 aa12.59□□□□□ -0.39
AC239809.3-208ENST00000611452 PIAS4Q8N2W9 510 aaPredicted RBP12.5□□□□□ -0.41
AC239809.3-208ENST00000611452 PPP6R1Q9UPN7 881 aa12.48□□□□□ -0.41
AC239809.3-208ENST00000611452 ADRA2BP18089 450 aa12.42□□□□□ -0.42
AC239809.3-208ENST00000611452 NISCHQ9Y2I1 1504 aa11.75□□□□□ -0.53
AC239809.3-208ENST00000611452 MAPK8IP2Q13387 824 aaPredicted RBP11.46□□□□□ -0.57
AC239809.3-208ENST00000611452 DMRT2Q9Y5R5 561 aa11.39□□□□□ -0.59
AC239809.3-208ENST00000611452 SCAF1Q9H7N4 1312 aaKnown RBP11.35□□□□□ -0.59
AC239809.3-208ENST00000611452 PPP4R3CPQ6ZMV5 832 aa11.04□□□□□ -0.64
AC239809.3-208ENST00000611452 HOXD11P31277 338 aaPredicted RBP10.93□□□□□ -0.66
AC239809.3-208ENST00000611452 CACNB1Q02641 598 aaPredicted RBP10.93□□□□□ -0.66
AC239809.3-208ENST00000611452 DCAF8L1A6NGE4 600 aa10.92□□□□□ -0.66
AC239809.3-208ENST00000611452 CNKSR2Q8WXI2 1034 aa10.86□□□□□ -0.67
AC239809.3-208ENST00000611452 RNF216Q9NWF9 866 aaPredicted RBP10.8□□□□□ -0.68
AC239809.3-208ENST00000611452 RNF39Q9H2S5 420 aa10.77□□□□□ -0.69
AC239809.3-208ENST00000611452 C1QBPQ07021 282 aaKnown RBP10.61□□□□□ -0.71
AC239809.3-208ENST00000611452 DNAJC5BQ9UF47 199 aa10.59□□□□□ -0.71
AC239809.3-208ENST00000611452 NCBP3Q53F19 620 aaKnown RBP10.56□□□□□ -0.72
AC239809.3-208ENST00000611452 HRCP23327 699 aa10.5□□□□□ -0.73
AC239809.3-208ENST00000611452 NPM3O75607 178 aaKnown RBP10.41□□□□□ -0.74
AC239809.3-208ENST00000611452 PELP1Q8IZL8 1130 aaKnown RBP10.39□□□□□ -0.75
AC239809.3-208ENST00000611452 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.39□□□□□ -0.75
AC239809.3-208ENST00000611452 DCAF1Q9Y4B6 1507 aa10.18□□□□□ -0.78
AC239809.3-208ENST00000611452 MYO15BQ96JP2 1530 aa10.17□□□□□ -0.78
AC239809.3-208ENST00000611452 U3KPZ7 1027 aaPredicted RBP10.16□□□□□ -0.78
AC239809.3-208ENST00000611452 CCDC180Q9P1Z9 1646 aa10.11□□□□□ -0.79
AC239809.3-208ENST00000611452 PCGF6Q9BYE7 350 aa10.1□□□□□ -0.79
AC239809.3-208ENST00000611452 SHROOM4Q9ULL8 1493 aa10.1□□□□□ -0.79
AC239809.3-208ENST00000611452 KCNA4P22459 653 aa10.08□□□□□ -0.8
AC239809.3-208ENST00000611452 MYT1Q01538 1121 aa10.08□□□□□ -0.8
AC239809.3-208ENST00000611452 SUPT5HO00267 1087 aaKnown RBP10.07□□□□□ -0.8
AC239809.3-208ENST00000611452 SPINK5Q9NQ38 1064 aaPredicted RBP10.07□□□□□ -0.8
AC239809.3-208ENST00000611452 PPARGC1BQ86YN6 1023 aaKnown RBP10.06□□□□□ -0.8
AC239809.3-208ENST00000611452 CAPN15O75808 1086 aa10.05□□□□□ -0.8
AC239809.3-208ENST00000611452 ZCCHC6Q5VYS8 1495 aaKnown RBP10.04□□□□□ -0.8
AC239809.3-208ENST00000611452 DSG3P32926 999 aa10.04□□□□□ -0.8
AC239809.3-208ENST00000611452 SLC4A2P04920 1241 aa9.99□□□□□ -0.81
AC239809.3-208ENST00000611452 ZEB1P37275 1124 aaPredicted RBP9.99□□□□□ -0.81
AC239809.3-208ENST00000611452 TRIM26Q12899 539 aaPredicted RBP9.93□□□□□ -0.82
AC239809.3-208ENST00000611452 TRHP20396 242 aaPredicted RBP9.85□□□□□ -0.83
AC239809.3-208ENST00000611452 APLP2Q06481 763 aa9.85□□□□□ -0.83
AC239809.3-208ENST00000611452 POTEHQ6S545 545 aa9.83□□□□□ -0.84
AC239809.3-208ENST00000611452 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.82□□□□□ -0.84
AC239809.3-208ENST00000611452 HNRNPUL2Q1KMD3 747 aaKnown RBP9.82□□□□□ -0.84
AC239809.3-208ENST00000611452 ZNF219Q9P2Y4 722 aaPredicted RBP9.82□□□□□ -0.84
AC239809.3-208ENST00000611452 ABCB7O75027 752 aa9.79□□□□□ -0.84
AC239809.3-208ENST00000611452 SAMD1Q6SPF0 538 aaPredicted RBP9.75□□□□□ -0.85
AC239809.3-208ENST00000611452 ACIN1Q9UKV3 1341 aaKnown RBP9.7□□□□□ -0.86
AC239809.3-208ENST00000611452 LOC105371045A0A1W2PR82 267 aa9.69□□□□□ -0.86
AC239809.3-208ENST00000611452 MYCNP04198 464 aaPredicted RBP9.62□□□□□ -0.87
AC239809.3-208ENST00000611452 CENPBP07199 599 aaPredicted RBP9.62□□□□□ -0.87
AC239809.3-208ENST00000611452 ABCC9O60706 1549 aa9.6□□□□□ -0.87
AC239809.3-208ENST00000611452 NEUROD1Q13562 356 aa9.57□□□□□ -0.88
AC239809.3-208ENST00000611452 POLA2Q14181 598 aa9.57□□□□□ -0.88
AC239809.3-208ENST00000611452 RBM42Q9BTD8 480 aaKnown RBP9.56□□□□□ -0.88
AC239809.3-208ENST00000611452 GTF3C3Q9Y5Q9 886 aa9.53□□□□□ -0.88
AC239809.3-208ENST00000611452 TTBK1Q5TCY1 1321 aaPredicted RBP9.51□□□□□ -0.89
AC239809.3-208ENST00000611452 SLC4A1APQ9BWU0 796 aaKnown RBP9.48□□□□□ -0.89
AC239809.3-208ENST00000611452 DIEXFQ68CQ4 756 aaKnown RBP9.46□□□□□ -0.9
AC239809.3-208ENST00000611452 RB1CC1Q8TDY2 1594 aa9.46□□□□□ -0.9
AC239809.3-208ENST00000611452 FOXD4L1Q9NU39 408 aa9.44□□□□□ -0.9
AC239809.3-208ENST00000611452 TRIM41Q8WV44 630 aa9.43□□□□□ -0.9
AC239809.3-208ENST00000611452 ATF5Q9Y2D1 282 aaPredicted RBP9.43□□□□□ -0.9
AC239809.3-208ENST00000611452 CHRDL2Q6WN34 429 aa9.41□□□□□ -0.9
AC239809.3-208ENST00000611452 CCER1Q8TC90 406 aaPredicted RBP9.4□□□□□ -0.9
AC239809.3-208ENST00000611452 RSF1Q96T23 1441 aaPredicted RBP9.39□□□□□ -0.91
AC239809.3-208ENST00000611452 CLSPNQ9HAW4 1339 aa9.37□□□□□ -0.91
AC239809.3-208ENST00000611452 DCAF8L2P0C7V8 631 aa9.35□□□□□ -0.91
AC239809.3-208ENST00000611452 WRNQ14191 1432 aaPredicted RBP eCLIP9.35□□□□□ -0.91
AC239809.3-208ENST00000611452 AKT1S1Q96B36 256 aa9.33□□□□□ -0.92
AC239809.3-208ENST00000611452 ZBTB12Q9Y330 459 aaPredicted RBP9.33□□□□□ -0.92
AC239809.3-208ENST00000611452 ZNF316A6NFI3 1004 aaPredicted RBP9.32□□□□□ -0.92
AC239809.3-208ENST00000611452 EHMT2Q96KQ7 1210 aa9.29□□□□□ -0.92
AC239809.3-208ENST00000611452 ZBTB22O15209 634 aa9.26□□□□□ -0.93
AC239809.3-208ENST00000611452 FAM9AQ8IZU1 332 aaPredicted RBP9.26□□□□□ -0.93
AC239809.3-208ENST00000611452 EIF4G1Q04637 1599 aaKnown RBP9.25□□□□□ -0.93
AC239809.3-208ENST00000611452 REM2Q8IYK8 340 aaPredicted RBP9.24□□□□□ -0.93
AC239809.3-208ENST00000611452 OSCARQ8IYS5 282 aa9.24□□□□□ -0.93
AC239809.3-208ENST00000611452 SCRIBQ14160 1630 aa9.22□□□□□ -0.93
AC239809.3-208ENST00000611452 ANP32EQ9BTT0 268 aa9.19□□□□□ -0.94
AC239809.3-208ENST00000611452 ATXN8OSP0DMR3 200 aa9.18□□□□□ -0.94
AC239809.3-208ENST00000611452 BAZ1AQ9NRL2 1556 aaPredicted RBP9.17□□□□□ -0.94
AC239809.3-208ENST00000611452 CEP162Q5TB80 1403 aa9.17□□□□□ -0.94
AC239809.3-208ENST00000611452 PIP4P2Q8N4L2 257 aa9.17□□□□□ -0.94
AC239809.3-208ENST00000611452 YTHDC1Q96MU7 727 aaKnown RBP9.17□□□□□ -0.94
AC239809.3-208ENST00000611452 MIER1Q8N108 512 aa9.16□□□□□ -0.94
AC239809.3-208ENST00000611452 EEA1Q15075 1411 aa9.15□□□□□ -0.94
AC239809.3-208ENST00000611452 TNIKQ9UKE5 1360 aa9.15□□□□□ -0.94
AC239809.3-208ENST00000611452 BCL11AQ9H165 835 aa9.15□□□□□ -0.94
AC239809.3-208ENST00000611452 SP7Q8TDD2 431 aaPredicted RBP9.14□□□□□ -0.95
AC239809.3-208ENST00000611452 PITPNM1O00562 1244 aa9.13□□□□□ -0.95
AC239809.3-208ENST00000611452 SUPT16HQ9Y5B9 1047 aaKnown RBP9.12□□□□□ -0.95
AC239809.3-208ENST00000611452 FXR2P51116 673 aaKnown RBP eCLIP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms