RNA–Protein interactions for RNA: ENST00000610417.4

SAMD4B-213, Transcript of sterile alpha motif domain containing 4B, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SAMD4B, Length 3,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4B-213ENST00000610417 NISCHQ9Y2I1 1504 aa21.55■■□□□ 1.04
SAMD4B-213ENST00000610417 DCAF8L2P0C7V8 631 aa19.54■□□□□ 0.72
SAMD4B-213ENST00000610417 SHROOM4Q9ULL8 1493 aa19.48■□□□□ 0.71
SAMD4B-213ENST00000610417 SUPT5HO00267 1087 aaKnown RBP19.14■□□□□ 0.65
SAMD4B-213ENST00000610417 CCDC180Q9P1Z9 1646 aa19.03■□□□□ 0.64
SAMD4B-213ENST00000610417 ABCC9O60706 1549 aa18.49■□□□□ 0.55
SAMD4B-213ENST00000610417 SLC24A1O60721 1099 aa18.44■□□□□ 0.54
SAMD4B-213ENST00000610417 PELP1Q8IZL8 1130 aaKnown RBP18.3■□□□□ 0.52
SAMD4B-213ENST00000610417 EHMT2Q96KQ7 1210 aa18.25■□□□□ 0.51
SAMD4B-213ENST00000610417 MYT1Q01538 1121 aa18.21■□□□□ 0.51
SAMD4B-213ENST00000610417 TTBK1Q5TCY1 1321 aaPredicted RBP18.08■□□□□ 0.49
SAMD4B-213ENST00000610417 PRKCSHP14314 528 aaPredicted RBP18.02■□□□□ 0.47
SAMD4B-213ENST00000610417 APLP2Q06481 763 aa18.01■□□□□ 0.47
SAMD4B-213ENST00000610417 ZCCHC6Q5VYS8 1495 aaKnown RBP17.99■□□□□ 0.47
SAMD4B-213ENST00000610417 FAM9AQ8IZU1 332 aaPredicted RBP17.92■□□□□ 0.46
SAMD4B-213ENST00000610417 CHIC1Q5VXU3 224 aa17.87■□□□□ 0.45
SAMD4B-213ENST00000610417 LOC105371045A0A1W2PR82 267 aa17.82■□□□□ 0.44
SAMD4B-213ENST00000610417 NACADO15069 1562 aa17.81■□□□□ 0.44
SAMD4B-213ENST00000610417 RB1CC1Q8TDY2 1594 aa17.8■□□□□ 0.44
SAMD4B-213ENST00000610417 DCAF1Q9Y4B6 1507 aa17.76■□□□□ 0.43
SAMD4B-213ENST00000610417 PCGF6Q9BYE7 350 aa17.75■□□□□ 0.43
SAMD4B-213ENST00000610417 MYO15BQ96JP2 1530 aa17.73■□□□□ 0.43
SAMD4B-213ENST00000610417 UNC13AQ9UPW8 1703 aa17.57■□□□□ 0.4
SAMD4B-213ENST00000610417 PPARGC1BQ86YN6 1023 aaKnown RBP17.52■□□□□ 0.4
SAMD4B-213ENST00000610417 TRIM41Q8WV44 630 aa17.49■□□□□ 0.39
SAMD4B-213ENST00000610417 DAXXQ9UER7 740 aaPredicted RBP17.49■□□□□ 0.39
SAMD4B-213ENST00000610417 SCRIBQ14160 1630 aa17.47■□□□□ 0.39
SAMD4B-213ENST00000610417 PABPN1Q86U42 306 aaKnown RBP eCLIP17.37■□□□□ 0.37
SAMD4B-213ENST00000610417 BICRAQ9NZM4 1560 aa17.34■□□□□ 0.37
SAMD4B-213ENST00000610417 RANGAP1P46060 587 aaPredicted RBP17.23■□□□□ 0.35
SAMD4B-213ENST00000610417 ERICH6Q7L0X2 663 aa17.14■□□□□ 0.33
SAMD4B-213ENST00000610417 HRCP23327 699 aa17.1■□□□□ 0.33
SAMD4B-213ENST00000610417 RSF1Q96T23 1441 aaPredicted RBP17.09■□□□□ 0.33
SAMD4B-213ENST00000610417 CECR2Q9BXF3 1484 aa17.08■□□□□ 0.32
SAMD4B-213ENST00000610417 UBTFP17480 764 aaKnown RBP16.92■□□□□ 0.3
SAMD4B-213ENST00000610417 TRIM26Q12899 539 aaPredicted RBP16.92■□□□□ 0.3
SAMD4B-213ENST00000610417 DNAJC5BQ9UF47 199 aa16.84■□□□□ 0.29
SAMD4B-213ENST00000610417 EIF4G1Q04637 1599 aaKnown RBP16.83■□□□□ 0.29
SAMD4B-213ENST00000610417 MROH2BQ7Z745 1585 aa16.82■□□□□ 0.28
SAMD4B-213ENST00000610417 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.77■□□□□ 0.28
SAMD4B-213ENST00000610417 CC2D2AQ9P2K1 1620 aa16.73■□□□□ 0.27
SAMD4B-213ENST00000610417 BCL11AQ9H165 835 aa16.71■□□□□ 0.27
SAMD4B-213ENST00000610417 CCER1Q8TC90 406 aaPredicted RBP16.7■□□□□ 0.26
SAMD4B-213ENST00000610417 WIZO95785 1651 aa16.7■□□□□ 0.26
SAMD4B-213ENST00000610417 SMARCA4P51532 1647 aa16.69■□□□□ 0.26
SAMD4B-213ENST00000610417 BAZ1AQ9NRL2 1556 aaPredicted RBP16.65■□□□□ 0.26
SAMD4B-213ENST00000610417 HNRNPUL2Q1KMD3 747 aaKnown RBP16.58■□□□□ 0.24
SAMD4B-213ENST00000610417 ABCC8Q09428 1581 aa16.56■□□□□ 0.24
SAMD4B-213ENST00000610417 ATAD2BQ9ULI0 1458 aa16.52■□□□□ 0.24
SAMD4B-213ENST00000610417 NCBP3Q53F19 620 aaKnown RBP16.49■□□□□ 0.23
SAMD4B-213ENST00000610417 PEG3Q9GZU2 1588 aa16.48■□□□□ 0.23
SAMD4B-213ENST00000610417 ATP1B4Q9UN42 357 aaPredicted RBP16.48■□□□□ 0.23
SAMD4B-213ENST00000610417 SMARCA2P51531 1590 aa16.47■□□□□ 0.23
SAMD4B-213ENST00000610417 CSRNP3Q8WYN3 585 aa16.47■□□□□ 0.23
SAMD4B-213ENST00000610417 SOGA1O94964 1423 aa16.46■□□□□ 0.23
SAMD4B-213ENST00000610417 NCAPD3P42695 1498 aa16.45■□□□□ 0.22
SAMD4B-213ENST00000610417 CCDC88BA6NC98 1476 aa16.44■□□□□ 0.22
SAMD4B-213ENST00000610417 ITGAEP38570 1179 aa16.44■□□□□ 0.22
SAMD4B-213ENST00000610417 BAZ1BQ9UIG0 1483 aaKnown RBP16.39■□□□□ 0.21
SAMD4B-213ENST00000610417 HMGXB3Q12766 1538 aa16.38■□□□□ 0.21
SAMD4B-213ENST00000610417 RUSC2Q8N2Y8 1516 aa16.37■□□□□ 0.21
SAMD4B-213ENST00000610417 ZEB1P37275 1124 aaPredicted RBP16.33■□□□□ 0.21
SAMD4B-213ENST00000610417 YTHDC1Q96MU7 727 aaKnown RBP16.31■□□□□ 0.2
SAMD4B-213ENST00000610417 TOP2AP11388 1531 aaKnown RBP16.27■□□□□ 0.19
SAMD4B-213ENST00000610417 P3H3Q8IVL6 736 aa16.26■□□□□ 0.19
SAMD4B-213ENST00000610417 EIF5BO60841 1220 aaKnown RBP16.25■□□□□ 0.19
SAMD4B-213ENST00000610417 CEP162Q5TB80 1403 aa16.23■□□□□ 0.19
SAMD4B-213ENST00000610417 SCAF1Q9H7N4 1312 aaKnown RBP16.21■□□□□ 0.19
SAMD4B-213ENST00000610417 WRNQ14191 1432 aaPredicted RBP eCLIP16.2■□□□□ 0.18
SAMD4B-213ENST00000610417 PLEKHG5O94827 1062 aa16.12■□□□□ 0.17
SAMD4B-213ENST00000610417 NESP48681 1621 aa16.1■□□□□ 0.17
SAMD4B-213ENST00000610417 DIEXFQ68CQ4 756 aaKnown RBP16.08■□□□□ 0.17
SAMD4B-213ENST00000610417 ARID3CA6NKF2 412 aa16.08■□□□□ 0.16
SAMD4B-213ENST00000610417 ARXQ96QS3 562 aa16.07■□□□□ 0.16
SAMD4B-213ENST00000610417 CLIP1P30622 1438 aa16.03■□□□□ 0.16
SAMD4B-213ENST00000610417 TNIKQ9UKE5 1360 aa16■□□□□ 0.15
SAMD4B-213ENST00000610417 CADPSQ9ULU8 1353 aa15.99■□□□□ 0.15
SAMD4B-213ENST00000610417 LAMC3Q9Y6N6 1575 aa15.99■□□□□ 0.15
SAMD4B-213ENST00000610417 FAM50AQ14320 339 aaKnown RBP15.98■□□□□ 0.15
SAMD4B-213ENST00000610417 GOLGA3Q08378 1498 aa15.97■□□□□ 0.15
SAMD4B-213ENST00000610417 CFTRP13569 1480 aa15.95■□□□□ 0.14
SAMD4B-213ENST00000610417 RAPGEF2Q9Y4G8 1499 aa15.95■□□□□ 0.14
SAMD4B-213ENST00000610417 KANK4Q5T7N3 995 aaPredicted RBP15.94■□□□□ 0.14
SAMD4B-213ENST00000610417 PLPPR3Q6T4P5 718 aa15.93■□□□□ 0.14
SAMD4B-213ENST00000610417 KIF21AQ7Z4S6 1674 aa15.93■□□□□ 0.14
SAMD4B-213ENST00000610417 PRDM2Q13029 1718 aa15.91■□□□□ 0.14
SAMD4B-213ENST00000610417 NEUROD1Q13562 356 aa15.9■□□□□ 0.14
SAMD4B-213ENST00000610417 UBE2Q2Q8WVN8 375 aa15.9■□□□□ 0.14
SAMD4B-213ENST00000610417 SYNJ1O43426 1573 aa15.89■□□□□ 0.13
SAMD4B-213ENST00000610417 ERCC6Q03468 1493 aa15.86■□□□□ 0.13
SAMD4B-213ENST00000610417 CEP164Q9UPV0 1460 aa15.84■□□□□ 0.13
SAMD4B-213ENST00000610417 RTN4Q9NQC3 1192 aaKnown RBP15.84■□□□□ 0.13
SAMD4B-213ENST00000610417 PDS5BQ9NTI5 1447 aa15.84■□□□□ 0.13
SAMD4B-213ENST00000610417 FANCD2Q9BXW9 1451 aa15.83■□□□□ 0.12
SAMD4B-213ENST00000610417 ZNF316A6NFI3 1004 aaPredicted RBP15.82■□□□□ 0.12
SAMD4B-213ENST00000610417 HIRIP3Q9BW71 556 aaPredicted RBP15.81■□□□□ 0.12
SAMD4B-213ENST00000610417 EEA1Q15075 1411 aa15.8■□□□□ 0.12
SAMD4B-213ENST00000610417 KLHL34Q8N239 644 aa15.8■□□□□ 0.12
SAMD4B-213ENST00000610417 GTF3C3Q9Y5Q9 886 aa15.79■□□□□ 0.12
SAMD4B-213ENST00000610417 TIMELESSQ9UNS1 1208 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms