RNA–Protein interactions for RNA: ENST00000608796.5

SWI5-206, Transcript of SWI5 homologous recombination repair protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SWI5, Length 906 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SWI5-206ENST00000608796 NISCHQ9Y2I1 1504 aa41.11■■■■■ 4.17
SWI5-206ENST00000608796 ABCC9O60706 1549 aa37.26■■■■□ 3.55
SWI5-206ENST00000608796 CCDC180Q9P1Z9 1646 aa36.91■■■■□ 3.5
SWI5-206ENST00000608796 RB1CC1Q8TDY2 1594 aa35.29■■■■□ 3.24
SWI5-206ENST00000608796 DNAJC5BQ9UF47 199 aa35.22■■■■□ 3.23
SWI5-206ENST00000608796 NACADO15069 1562 aa34.99■■■■□ 3.19
SWI5-206ENST00000608796 DCAF8L2P0C7V8 631 aa34.98■■■■□ 3.19
SWI5-206ENST00000608796 PABPN1Q86U42 306 aaKnown RBP eCLIP34.72■■■■□ 3.15
SWI5-206ENST00000608796 UNC13AQ9UPW8 1703 aa34.5■■■■□ 3.11
SWI5-206ENST00000608796 MYO15BQ96JP2 1530 aa34.4■■■■□ 3.1
SWI5-206ENST00000608796 BICRAQ9NZM4 1560 aa34.29■■■■□ 3.08
SWI5-206ENST00000608796 ZCCHC6Q5VYS8 1495 aaKnown RBP33.99■■■■□ 3.03
SWI5-206ENST00000608796 DCAF1Q9Y4B6 1507 aa33.89■■■■□ 3.02
SWI5-206ENST00000608796 SHROOM4Q9ULL8 1493 aa33.71■■■□□ 2.99
SWI5-206ENST00000608796 SCRIBQ14160 1630 aa33.7■■■□□ 2.99
SWI5-206ENST00000608796 CC2D2AQ9P2K1 1620 aa33.61■■■□□ 2.97
SWI5-206ENST00000608796 CECR2Q9BXF3 1484 aa33.56■■■□□ 2.96
SWI5-206ENST00000608796 EIF4G1Q04637 1599 aaKnown RBP33.47■■■□□ 2.95
SWI5-206ENST00000608796 DNAJC5Q9H3Z4 198 aa32.46■■■□□ 2.79
SWI5-206ENST00000608796 NCAPD3P42695 1498 aa32.34■■■□□ 2.77
SWI5-206ENST00000608796 ATAD2BQ9ULI0 1458 aa32.22■■■□□ 2.75
SWI5-206ENST00000608796 ERCC6Q03468 1493 aa32.16■■■□□ 2.74
SWI5-206ENST00000608796 CUX2O14529 1486 aa32.12■■■□□ 2.73
SWI5-206ENST00000608796 SMARCA4P51532 1647 aa32.1■■■□□ 2.73
SWI5-206ENST00000608796 SMARCA2P51531 1590 aa32.07■■■□□ 2.72
SWI5-206ENST00000608796 HMGXB3Q12766 1538 aa32.02■■■□□ 2.72
SWI5-206ENST00000608796 NESP48681 1621 aa31.95■■■□□ 2.71
SWI5-206ENST00000608796 BAZ1AQ9NRL2 1556 aaPredicted RBP31.9■■■□□ 2.7
SWI5-206ENST00000608796 BAZ1BQ9UIG0 1483 aaKnown RBP31.89■■■□□ 2.7
SWI5-206ENST00000608796 PEG3Q9GZU2 1588 aa31.76■■■□□ 2.67
SWI5-206ENST00000608796 MROH2BQ7Z745 1585 aa31.7■■■□□ 2.67
SWI5-206ENST00000608796 LAMC3Q9Y6N6 1575 aa31.61■■■□□ 2.65
SWI5-206ENST00000608796 THOC2Q8NI27 1593 aaKnown RBP31.58■■■□□ 2.65
SWI5-206ENST00000608796 PDS5BQ9NTI5 1447 aa31.48■■■□□ 2.63
SWI5-206ENST00000608796 KIF21AQ7Z4S6 1674 aa31.48■■■□□ 2.63
SWI5-206ENST00000608796 CADPSQ9ULU8 1353 aa31.37■■■□□ 2.61
SWI5-206ENST00000608796 WIZO95785 1651 aa31.32■■■□□ 2.6
SWI5-206ENST00000608796 MRC2Q9UBG0 1479 aa31.2■■■□□ 2.58
SWI5-206ENST00000608796 WDR62O43379 1518 aa31.11■■■□□ 2.57
SWI5-206ENST00000608796 CEP164Q9UPV0 1460 aa31.03■■■□□ 2.56
SWI5-206ENST00000608796 TRIM41Q8WV44 630 aa31■■■□□ 2.55
SWI5-206ENST00000608796 FANCD2Q9BXW9 1451 aa31■■■□□ 2.55
SWI5-206ENST00000608796 RSF1Q96T23 1441 aaPredicted RBP30.98■■■□□ 2.55
SWI5-206ENST00000608796 CFTRP13569 1480 aa30.94■■■□□ 2.54
SWI5-206ENST00000608796 TOP2AP11388 1531 aaKnown RBP30.85■■■□□ 2.53
SWI5-206ENST00000608796 URB2Q14146 1524 aaKnown RBP30.76■■■□□ 2.51
SWI5-206ENST00000608796 OSCARQ8IYS5 282 aa30.73■■■□□ 2.51
SWI5-206ENST00000608796 CCDC88BA6NC98 1476 aa30.57■■■□□ 2.48
SWI5-206ENST00000608796 PRDM2Q13029 1718 aa30.53■■■□□ 2.48
SWI5-206ENST00000608796 ZNF608Q9ULD9 1512 aaPredicted RBP30.44■■■□□ 2.46
SWI5-206ENST00000608796 IFT140Q96RY7 1462 aa30.42■■■□□ 2.46
SWI5-206ENST00000608796 TOPBP1Q92547 1522 aa30.38■■■□□ 2.45
SWI5-206ENST00000608796 ABCC8Q09428 1581 aa30.28■■■□□ 2.44
SWI5-206ENST00000608796 RIMBP3CA6NJZ7 1639 aa30.28■■■□□ 2.44
SWI5-206ENST00000608796 RIMBP3BA6NNM3 1639 aa30.28■■■□□ 2.44
SWI5-206ENST00000608796 RIMBP3Q9UFD9 1639 aa30.28■■■□□ 2.44
SWI5-206ENST00000608796 DNMBPQ6XZF7 1577 aa30.22■■■□□ 2.43
SWI5-206ENST00000608796 EIF4G3O43432 1585 aaKnown RBP30.2■■■□□ 2.43
SWI5-206ENST00000608796 AQRO60306 1485 aaKnown RBP eCLIP30.17■■■□□ 2.423e-7■■■□□ 17
SWI5-206ENST00000608796 ARHGEF11O15085 1522 aa30.17■■■□□ 2.42
SWI5-206ENST00000608796 TARBP1Q13395 1621 aaKnown RBP30.12■■■□□ 2.41
SWI5-206ENST00000608796 FBLN2P98095 1184 aa30.07■■■□□ 2.4
SWI5-206ENST00000608796 CYB5RLQ6IPT4 315 aa30.06■■■□□ 2.4
SWI5-206ENST00000608796 POLA1P09884 1462 aaPredicted RBP30.06■■■□□ 2.4
SWI5-206ENST00000608796 CHD1O14646 1710 aa30.03■■■□□ 2.4
SWI5-206ENST00000608796 RAD54L2Q9Y4B4 1467 aa30■■■□□ 2.39
SWI5-206ENST00000608796 SOGA1O94964 1423 aa29.96■■■□□ 2.39
SWI5-206ENST00000608796 TDRD9Q8NDG6 1382 aaKnown RBP29.96■■■□□ 2.39
SWI5-206ENST00000608796 FGD5Q6ZNL6 1462 aa29.85■■■□□ 2.37
SWI5-206ENST00000608796 ARAP1Q96P48 1450 aa29.85■■■□□ 2.37
SWI5-206ENST00000608796 TRHP20396 242 aaPredicted RBP29.81■■■□□ 2.36
SWI5-206ENST00000608796 SNAPC4Q5SXM2 1469 aa29.8■■■□□ 2.36
SWI5-206ENST00000608796 CUX1P39880 1505 aa29.78■■■□□ 2.36
SWI5-206ENST00000608796 CHMP7Q8WUX9 453 aaPredicted RBP29.78■■■□□ 2.36
SWI5-206ENST00000608796 WDR97A6NE52 1622 aa29.72■■■□□ 2.35
SWI5-206ENST00000608796 GRIN2BQ13224 1484 aa29.68■■■□□ 2.34
SWI5-206ENST00000608796 MAGI1Q96QZ7 1491 aaPredicted RBP29.68■■■□□ 2.34
SWI5-206ENST00000608796 CLASP1Q7Z460 1538 aa29.66■■■□□ 2.34
SWI5-206ENST00000608796 SYNJ1O43426 1573 aa29.63■■■□□ 2.33
SWI5-206ENST00000608796 SYNJ2O15056 1496 aa29.61■■■□□ 2.33
SWI5-206ENST00000608796 GAPVD1Q14C86 1478 aa29.56■■■□□ 2.32
SWI5-206ENST00000608796 SUPT5HO00267 1087 aaKnown RBP29.56■■■□□ 2.32
SWI5-206ENST00000608796 PBRM1Q86U86 1689 aa29.52■■■□□ 2.32
SWI5-206ENST00000608796 ABCA10Q8WWZ4 1543 aa29.46■■■□□ 2.31
SWI5-206ENST00000608796 ABCA5Q8WWZ7 1642 aa29.42■■■□□ 2.3
SWI5-206ENST00000608796 WRNQ14191 1432 aaPredicted RBP eCLIP29.34■■■□□ 2.295e-6■■■■■ 29.2
SWI5-206ENST00000608796 GRIN2AQ12879 1464 aa29.3■■■□□ 2.28
SWI5-206ENST00000608796 ERCC6L2Q5T890 1561 aa29.25■■■□□ 2.27
SWI5-206ENST00000608796 TOP2BQ02880 1626 aa29.22■■■□□ 2.27
SWI5-206ENST00000608796 ADAMTS12P58397 1594 aa29.22■■■□□ 2.27
SWI5-206ENST00000608796 BIVM-ERCC5R4GMW8 1640 aa29.2■■■□□ 2.27
SWI5-206ENST00000608796 CEP170Q5SW79 1584 aa29.2■■■□□ 2.26
SWI5-206ENST00000608796 NUP160Q12769 1436 aa29.2■■■□□ 2.26
SWI5-206ENST00000608796 FHAD1B1AJZ9 1412 aa29.17■■■□□ 2.26
SWI5-206ENST00000608796 ERICH3Q5RHP9 1530 aa29.09■■■□□ 2.25
SWI5-206ENST00000608796 AEBP2Q6ZN18 517 aaPredicted RBP29.08■■■□□ 2.25
SWI5-206ENST00000608796 SHROOM2Q13796 1616 aa29.07■■■□□ 2.24
SWI5-206ENST00000608796 JPH4Q96JJ6 628 aa28.99■■■□□ 2.23
SWI5-206ENST00000608796 PRG4Q92954 1404 aaPredicted RBP28.99■■■□□ 2.23
SWI5-206ENST00000608796 KIF13AQ9H1H9 1805 aa28.82■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms