RNA–Protein interactions for RNA: ENST00000606699.5

NECAB3-220, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 1,022 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-220ENST00000606699 NISCHQ9Y2I1 1504 aa46.68■■■■■ 5.06
NECAB3-220ENST00000606699 ABCC9O60706 1549 aa42.25■■■■■ 4.35
NECAB3-220ENST00000606699 CCDC180Q9P1Z9 1646 aa41.95■■■■■ 4.31
NECAB3-220ENST00000606699 RB1CC1Q8TDY2 1594 aa40.14■■■■■ 4.02
NECAB3-220ENST00000606699 DNAJC5BQ9UF47 199 aa39.95■■■■□ 3.99
NECAB3-220ENST00000606699 NACADO15069 1562 aa39.82■■■■□ 3.97
NECAB3-220ENST00000606699 DCAF8L2P0C7V8 631 aa39.53■■■■□ 3.92
NECAB3-220ENST00000606699 PABPN1Q86U42 306 aaKnown RBP eCLIP39.33■■■■□ 3.89
NECAB3-220ENST00000606699 MYO15BQ96JP2 1530 aa39.24■■■■□ 3.87
NECAB3-220ENST00000606699 UNC13AQ9UPW8 1703 aa39.06■■■■□ 3.84
NECAB3-220ENST00000606699 BICRAQ9NZM4 1560 aa38.92■■■■□ 3.82
NECAB3-220ENST00000606699 DCAF1Q9Y4B6 1507 aa38.6■■■■□ 3.77
NECAB3-220ENST00000606699 ZCCHC6Q5VYS8 1495 aaKnown RBP38.6■■■■□ 3.77
NECAB3-220ENST00000606699 SHROOM4Q9ULL8 1493 aa38.51■■■■□ 3.76
NECAB3-220ENST00000606699 SCRIBQ14160 1630 aa38.15■■■■□ 3.7
NECAB3-220ENST00000606699 CC2D2AQ9P2K1 1620 aa38.14■■■■□ 3.7
NECAB3-220ENST00000606699 CECR2Q9BXF3 1484 aa38.14■■■■□ 3.7
NECAB3-220ENST00000606699 EIF4G1Q04637 1599 aaKnown RBP38.01■■■■□ 3.67
NECAB3-220ENST00000606699 DNAJC5Q9H3Z4 198 aa37■■■■□ 3.51
NECAB3-220ENST00000606699 NCAPD3P42695 1498 aa36.81■■■■□ 3.48
NECAB3-220ENST00000606699 CUX2O14529 1486 aa36.63■■■■□ 3.45
NECAB3-220ENST00000606699 ATAD2BQ9ULI0 1458 aa36.6■■■■□ 3.45
NECAB3-220ENST00000606699 ERCC6Q03468 1493 aa36.54■■■■□ 3.44
NECAB3-220ENST00000606699 SMARCA2P51531 1590 aa36.49■■■■□ 3.43
NECAB3-220ENST00000606699 HMGXB3Q12766 1538 aa36.44■■■■□ 3.42
NECAB3-220ENST00000606699 SMARCA4P51532 1647 aa36.41■■■■□ 3.42
NECAB3-220ENST00000606699 BAZ1AQ9NRL2 1556 aaPredicted RBP36.25■■■■□ 3.39
NECAB3-220ENST00000606699 BAZ1BQ9UIG0 1483 aaKnown RBP36.2■■■■□ 3.39
NECAB3-220ENST00000606699 NESP48681 1621 aa36.19■■■■□ 3.38
NECAB3-220ENST00000606699 PEG3Q9GZU2 1588 aa36.14■■■■□ 3.38
NECAB3-220ENST00000606699 LAMC3Q9Y6N6 1575 aa35.96■■■■□ 3.35
NECAB3-220ENST00000606699 MROH2BQ7Z745 1585 aa35.91■■■■□ 3.34
NECAB3-220ENST00000606699 THOC2Q8NI27 1593 aaKnown RBP35.87■■■■□ 3.33
NECAB3-220ENST00000606699 PDS5BQ9NTI5 1447 aa35.83■■■■□ 3.33
NECAB3-220ENST00000606699 CADPSQ9ULU8 1353 aa35.67■■■■□ 3.3
NECAB3-220ENST00000606699 KIF21AQ7Z4S6 1674 aa35.65■■■■□ 3.3
NECAB3-220ENST00000606699 MRC2Q9UBG0 1479 aa35.47■■■■□ 3.27
NECAB3-220ENST00000606699 WIZO95785 1651 aa35.41■■■■□ 3.26
NECAB3-220ENST00000606699 WDR62O43379 1518 aa35.37■■■■□ 3.25
NECAB3-220ENST00000606699 CEP164Q9UPV0 1460 aa35.26■■■■□ 3.23
NECAB3-220ENST00000606699 FANCD2Q9BXW9 1451 aa35.21■■■■□ 3.23
NECAB3-220ENST00000606699 CFTRP13569 1480 aa35.18■■■■□ 3.22
NECAB3-220ENST00000606699 TRIM41Q8WV44 630 aa35.15■■■■□ 3.22
NECAB3-220ENST00000606699 RSF1Q96T23 1441 aaPredicted RBP35.12■■■■□ 3.21
NECAB3-220ENST00000606699 TOP2AP11388 1531 aaKnown RBP35.01■■■■□ 3.2
NECAB3-220ENST00000606699 OSCARQ8IYS5 282 aa34.96■■■■□ 3.19
NECAB3-220ENST00000606699 URB2Q14146 1524 aaKnown RBP34.9■■■■□ 3.18
NECAB3-220ENST00000606699 CCDC88BA6NC98 1476 aa34.65■■■■□ 3.14
NECAB3-220ENST00000606699 PRDM2Q13029 1718 aa34.64■■■■□ 3.14
NECAB3-220ENST00000606699 IFT140Q96RY7 1462 aa34.61■■■■□ 3.13
NECAB3-220ENST00000606699 ZNF608Q9ULD9 1512 aaPredicted RBP34.5■■■■□ 3.11
NECAB3-220ENST00000606699 ABCC8Q09428 1581 aa34.49■■■■□ 3.11
NECAB3-220ENST00000606699 TOPBP1Q92547 1522 aa34.49■■■■□ 3.11
NECAB3-220ENST00000606699 RIMBP3CA6NJZ7 1639 aa34.37■■■■□ 3.09
NECAB3-220ENST00000606699 RIMBP3BA6NNM3 1639 aa34.37■■■■□ 3.09
NECAB3-220ENST00000606699 RIMBP3Q9UFD9 1639 aa34.37■■■■□ 3.09
NECAB3-220ENST00000606699 DNMBPQ6XZF7 1577 aa34.32■■■■□ 3.09
NECAB3-220ENST00000606699 ARHGEF11O15085 1522 aa34.29■■■■□ 3.08
NECAB3-220ENST00000606699 EIF4G3O43432 1585 aaKnown RBP34.26■■■■□ 3.07
NECAB3-220ENST00000606699 AQRO60306 1485 aaKnown RBP eCLIP34.2■■■■□ 3.063e-7■■■■■ 28.2
NECAB3-220ENST00000606699 TARBP1Q13395 1621 aaKnown RBP34.17■■■■□ 3.06
NECAB3-220ENST00000606699 POLA1P09884 1462 aaPredicted RBP34.12■■■■□ 3.05
NECAB3-220ENST00000606699 CYB5RLQ6IPT4 315 aa34.11■■■■□ 3.05
NECAB3-220ENST00000606699 FBLN2P98095 1184 aa34.05■■■■□ 3.04
NECAB3-220ENST00000606699 CHD1O14646 1710 aa34.01■■■■□ 3.04
NECAB3-220ENST00000606699 SOGA1O94964 1423 aa34.01■■■■□ 3.03
NECAB3-220ENST00000606699 RAD54L2Q9Y4B4 1467 aa33.98■■■■□ 3.03
NECAB3-220ENST00000606699 TDRD9Q8NDG6 1382 aaKnown RBP33.96■■■■□ 3.03
NECAB3-220ENST00000606699 ARAP1Q96P48 1450 aa33.92■■■■□ 3.02
NECAB3-220ENST00000606699 WDR97A6NE52 1622 aa33.89■■■■□ 3.02
NECAB3-220ENST00000606699 FGD5Q6ZNL6 1462 aa33.84■■■■□ 3.01
NECAB3-220ENST00000606699 TRHP20396 242 aaPredicted RBP33.82■■■■□ 3
NECAB3-220ENST00000606699 CHMP7Q8WUX9 453 aaPredicted RBP33.81■■■■□ 3
NECAB3-220ENST00000606699 SNAPC4Q5SXM2 1469 aa33.81■■■■□ 3
NECAB3-220ENST00000606699 MAGI1Q96QZ7 1491 aaPredicted RBP33.77■■■■□ 3
NECAB3-220ENST00000606699 CUX1P39880 1505 aa33.75■■■□□ 2.99
NECAB3-220ENST00000606699 GRIN2BQ13224 1484 aa33.74■■■□□ 2.99
NECAB3-220ENST00000606699 CLASP1Q7Z460 1538 aa33.72■■■□□ 2.99
NECAB3-220ENST00000606699 SYNJ1O43426 1573 aa33.69■■■□□ 2.98
NECAB3-220ENST00000606699 SYNJ2O15056 1496 aa33.66■■■□□ 2.98
NECAB3-220ENST00000606699 GAPVD1Q14C86 1478 aa33.56■■■□□ 2.96
NECAB3-220ENST00000606699 ABCA10Q8WWZ4 1543 aa33.49■■■□□ 2.95
NECAB3-220ENST00000606699 PBRM1Q86U86 1689 aa33.44■■■□□ 2.94
NECAB3-220ENST00000606699 ABCA5Q8WWZ7 1642 aa33.39■■■□□ 2.94
NECAB3-220ENST00000606699 WRNQ14191 1432 aaPredicted RBP eCLIP33.34■■■□□ 2.936e-7■■■■■ 33.4
NECAB3-220ENST00000606699 SUPT5HO00267 1087 aaKnown RBP33.31■■■□□ 2.92
NECAB3-220ENST00000606699 GRIN2AQ12879 1464 aa33.28■■■□□ 2.92
NECAB3-220ENST00000606699 NUP160Q12769 1436 aa33.2■■■□□ 2.91
NECAB3-220ENST00000606699 FHAD1B1AJZ9 1412 aa33.16■■■□□ 2.9
NECAB3-220ENST00000606699 ADAMTS12P58397 1594 aa33.16■■■□□ 2.9
NECAB3-220ENST00000606699 TOP2BQ02880 1626 aa33.15■■■□□ 2.9
NECAB3-220ENST00000606699 BIVM-ERCC5R4GMW8 1640 aa33.12■■■□□ 2.89
NECAB3-220ENST00000606699 CEP170Q5SW79 1584 aa33.11■■■□□ 2.89
NECAB3-220ENST00000606699 ERCC6L2Q5T890 1561 aa33.11■■■□□ 2.89
NECAB3-220ENST00000606699 AEBP2Q6ZN18 517 aaPredicted RBP33.08■■■□□ 2.89
NECAB3-220ENST00000606699 ERICH3Q5RHP9 1530 aa33.07■■■□□ 2.89
NECAB3-220ENST00000606699 SHROOM2Q13796 1616 aa33.03■■■□□ 2.88
NECAB3-220ENST00000606699 JPH4Q96JJ6 628 aa32.92■■■□□ 2.86
NECAB3-220ENST00000606699 PRG4Q92954 1404 aaPredicted RBP32.9■■■□□ 2.86
NECAB3-220ENST00000606699 NPM1P06748 294 aaKnown RBP eCLIP32.71■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 156.7 ms