RNA–Protein interactions for RNA: ENST00000606624.1

LINC01623-202, Transcript of long intergenic non-protein coding RNA 1623, humanhuman

TSL 4

Gene LINC01623, Length 560 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01623-202ENST00000606624 AEBP2Q6ZN18 517 aaPredicted RBP23.25■■□□□ 1.31
LINC01623-202ENST00000606624 CHIC1Q5VXU3 224 aa21.97■■□□□ 1.11
LINC01623-202ENST00000606624 SENP3Q9H4L4 574 aaPredicted RBP20■□□□□ 0.79
LINC01623-202ENST00000606624 PHF23Q9BUL5 403 aaPredicted RBP19.66■□□□□ 0.74
LINC01623-202ENST00000606624 FOXD1Q16676 465 aa18.58■□□□□ 0.56
LINC01623-202ENST00000606624 NISCHQ9Y2I1 1504 aa17.88■□□□□ 0.45
LINC01623-202ENST00000606624 MSH5O43196 834 aa17.57■□□□□ 0.4
LINC01623-202ENST00000606624 PLPPR3Q6T4P5 718 aa17.52■□□□□ 0.4
LINC01623-202ENST00000606624 POTEDQ86YR6 584 aa17.37■□□□□ 0.37
LINC01623-202ENST00000606624 PIAS4Q8N2W9 510 aaPredicted RBP17.35■□□□□ 0.37
LINC01623-202ENST00000606624 PPP6R1Q9UPN7 881 aa17.18■□□□□ 0.34
LINC01623-202ENST00000606624 ADRA2BP18089 450 aa17.13■□□□□ 0.33
LINC01623-202ENST00000606624 CCDC180Q9P1Z9 1646 aa15.95■□□□□ 0.14
LINC01623-202ENST00000606624 SCAF1Q9H7N4 1312 aaKnown RBP15.85■□□□□ 0.13
LINC01623-202ENST00000606624 DMRT2Q9Y5R5 561 aa15.8■□□□□ 0.12
LINC01623-202ENST00000606624 MAPK8IP2Q13387 824 aaPredicted RBP15.77■□□□□ 0.12
LINC01623-202ENST00000606624 ABCC9O60706 1549 aa15.74■□□□□ 0.11
LINC01623-202ENST00000606624 PPP4R3CPQ6ZMV5 832 aa15.28■□□□□ 0.04
LINC01623-202ENST00000606624 DCAF8L1A6NGE4 600 aa15.15■□□□□ 0.02
LINC01623-202ENST00000606624 CACNB1Q02641 598 aaPredicted RBP15.15■□□□□ 0.02
LINC01623-202ENST00000606624 HOXD11P31277 338 aaPredicted RBP15.14■□□□□ 0.01
LINC01623-202ENST00000606624 RB1CC1Q8TDY2 1594 aa15.12■□□□□ 0.01
LINC01623-202ENST00000606624 CNKSR2Q8WXI2 1034 aa15.09■□□□□ 0.01
LINC01623-202ENST00000606624 NACADO15069 1562 aa15.08■□□□□ 0
LINC01623-202ENST00000606624 DCAF8L2P0C7V8 631 aa15.07■□□□□ 0
LINC01623-202ENST00000606624 RNF216Q9NWF9 866 aaPredicted RBP15□□□□□ -0.01
LINC01623-202ENST00000606624 MYO15BQ96JP2 1530 aa14.97□□□□□ -0.01
LINC01623-202ENST00000606624 RNF39Q9H2S5 420 aa14.92□□□□□ -0.02
LINC01623-202ENST00000606624 ZCCHC6Q5VYS8 1495 aaKnown RBP14.85□□□□□ -0.03
LINC01623-202ENST00000606624 DCAF1Q9Y4B6 1507 aa14.82□□□□□ -0.04
LINC01623-202ENST00000606624 C1QBPQ07021 282 aaKnown RBP14.75□□□□□ -0.05
LINC01623-202ENST00000606624 DNAJC5BQ9UF47 199 aa14.75□□□□□ -0.05
LINC01623-202ENST00000606624 NCBP3Q53F19 620 aaKnown RBP14.74□□□□□ -0.05
LINC01623-202ENST00000606624 PABPN1Q86U42 306 aaKnown RBP eCLIP14.71□□□□□ -0.05
LINC01623-202ENST00000606624 UNC13AQ9UPW8 1703 aa14.64□□□□□ -0.07
LINC01623-202ENST00000606624 BICRAQ9NZM4 1560 aa14.58□□□□□ -0.08
LINC01623-202ENST00000606624 SHROOM4Q9ULL8 1493 aa14.55□□□□□ -0.08
LINC01623-202ENST00000606624 SCRIBQ14160 1630 aa14.5□□□□□ -0.09
LINC01623-202ENST00000606624 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.45□□□□□ -0.1
LINC01623-202ENST00000606624 NPM3O75607 178 aaKnown RBP14.41□□□□□ -0.1
LINC01623-202ENST00000606624 EIF4G1Q04637 1599 aaKnown RBP14.26□□□□□ -0.13
LINC01623-202ENST00000606624 CC2D2AQ9P2K1 1620 aa14.23□□□□□ -0.13
LINC01623-202ENST00000606624 CECR2Q9BXF3 1484 aa14.2□□□□□ -0.14
LINC01623-202ENST00000606624 U3KPZ7 1027 aaPredicted RBP14.06□□□□□ -0.16
LINC01623-202ENST00000606624 CAPN15O75808 1086 aa13.94□□□□□ -0.18
LINC01623-202ENST00000606624 KCNA4P22459 653 aa13.93□□□□□ -0.18
LINC01623-202ENST00000606624 NCAPD3P42695 1498 aa13.93□□□□□ -0.18
LINC01623-202ENST00000606624 BAZ1AQ9NRL2 1556 aaPredicted RBP13.9□□□□□ -0.18
LINC01623-202ENST00000606624 DSG3P32926 999 aa13.89□□□□□ -0.19
LINC01623-202ENST00000606624 SPINK5Q9NQ38 1064 aaPredicted RBP13.89□□□□□ -0.19
LINC01623-202ENST00000606624 SMARCA2P51531 1590 aa13.88□□□□□ -0.19
LINC01623-202ENST00000606624 ATAD2BQ9ULI0 1458 aa13.88□□□□□ -0.19
LINC01623-202ENST00000606624 SMARCA4P51532 1647 aa13.88□□□□□ -0.19
LINC01623-202ENST00000606624 APLP2Q06481 763 aa13.82□□□□□ -0.2
LINC01623-202ENST00000606624 HMGXB3Q12766 1538 aa13.81□□□□□ -0.2
LINC01623-202ENST00000606624 SLC4A2P04920 1241 aa13.78□□□□□ -0.2
LINC01623-202ENST00000606624 PEG3Q9GZU2 1588 aa13.78□□□□□ -0.2
LINC01623-202ENST00000606624 BAZ1BQ9UIG0 1483 aaKnown RBP13.77□□□□□ -0.21
LINC01623-202ENST00000606624 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.75□□□□□ -0.21
LINC01623-202ENST00000606624 HNRNPUL2Q1KMD3 747 aaKnown RBP13.75□□□□□ -0.21
LINC01623-202ENST00000606624 MROH2BQ7Z745 1585 aa13.74□□□□□ -0.21
LINC01623-202ENST00000606624 ZNF219Q9P2Y4 722 aaPredicted RBP13.7□□□□□ -0.22
LINC01623-202ENST00000606624 TRHP20396 242 aaPredicted RBP13.65□□□□□ -0.22
LINC01623-202ENST00000606624 ERCC6Q03468 1493 aa13.64□□□□□ -0.23
LINC01623-202ENST00000606624 SAMD1Q6SPF0 538 aaPredicted RBP13.62□□□□□ -0.23
LINC01623-202ENST00000606624 POTEHQ6S545 545 aa13.61□□□□□ -0.23
LINC01623-202ENST00000606624 RSF1Q96T23 1441 aaPredicted RBP13.56□□□□□ -0.24
LINC01623-202ENST00000606624 LAMC3Q9Y6N6 1575 aa13.56□□□□□ -0.24
LINC01623-202ENST00000606624 WIZO95785 1651 aa13.56□□□□□ -0.24
LINC01623-202ENST00000606624 CUX2O14529 1486 aa13.55□□□□□ -0.24
LINC01623-202ENST00000606624 NESP48681 1621 aa13.54□□□□□ -0.24
LINC01623-202ENST00000606624 ABCB7O75027 752 aa13.54□□□□□ -0.24
LINC01623-202ENST00000606624 PDS5BQ9NTI5 1447 aa13.54□□□□□ -0.24
LINC01623-202ENST00000606624 CADPSQ9ULU8 1353 aa13.52□□□□□ -0.25
LINC01623-202ENST00000606624 TOP2AP11388 1531 aaKnown RBP13.46□□□□□ -0.25
LINC01623-202ENST00000606624 MYCNP04198 464 aaPredicted RBP13.39□□□□□ -0.27
LINC01623-202ENST00000606624 CFTRP13569 1480 aa13.38□□□□□ -0.27
LINC01623-202ENST00000606624 THOC2Q8NI27 1593 aaKnown RBP13.37□□□□□ -0.27
LINC01623-202ENST00000606624 RBM42Q9BTD8 480 aaKnown RBP13.36□□□□□ -0.27
LINC01623-202ENST00000606624 KIF21AQ7Z4S6 1674 aa13.36□□□□□ -0.27
LINC01623-202ENST00000606624 MRC2Q9UBG0 1479 aa13.35□□□□□ -0.27
LINC01623-202ENST00000606624 CEP164Q9UPV0 1460 aa13.34□□□□□ -0.27
LINC01623-202ENST00000606624 DNAJC5Q9H3Z4 198 aa13.33□□□□□ -0.28
LINC01623-202ENST00000606624 FANCD2Q9BXW9 1451 aa13.33□□□□□ -0.28
LINC01623-202ENST00000606624 CCDC88BA6NC98 1476 aa13.31□□□□□ -0.28
LINC01623-202ENST00000606624 WDR62O43379 1518 aa13.29□□□□□ -0.28
LINC01623-202ENST00000606624 POLA2Q14181 598 aa13.26□□□□□ -0.29
LINC01623-202ENST00000606624 PRDM2Q13029 1718 aa13.19□□□□□ -0.3
LINC01623-202ENST00000606624 SLC4A1APQ9BWU0 796 aaKnown RBP13.17□□□□□ -0.3
LINC01623-202ENST00000606624 ABCC8Q09428 1581 aa13.16□□□□□ -0.3
LINC01623-202ENST00000606624 URB2Q14146 1524 aaKnown RBP13.16□□□□□ -0.3
LINC01623-202ENST00000606624 SUPT5HO00267 1087 aaKnown RBP13.15□□□□□ -0.3
LINC01623-202ENST00000606624 FOXD4L1Q9NU39 408 aa13.12□□□□□ -0.31
LINC01623-202ENST00000606624 IFT140Q96RY7 1462 aa13.09□□□□□ -0.31
LINC01623-202ENST00000606624 TOPBP1Q92547 1522 aa13.08□□□□□ -0.31
LINC01623-202ENST00000606624 ZBTB12Q9Y330 459 aaPredicted RBP13.08□□□□□ -0.32
LINC01623-202ENST00000606624 CHRDL2Q6WN34 429 aa13.07□□□□□ -0.32
LINC01623-202ENST00000606624 DNMBPQ6XZF7 1577 aa13.06□□□□□ -0.32
LINC01623-202ENST00000606624 OSCARQ8IYS5 282 aa13.02□□□□□ -0.33
LINC01623-202ENST00000606624 AKT1S1Q96B36 256 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms