RNA–Protein interactions for RNA: ENST00000606472.1

LYRM4-209, Transcript of LYR motif containing 4, humanhuman

TSL 2

Gene LYRM4, Length 1,005 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM4-209ENST00000606472 AEBP2Q6ZN18 517 aaPredicted RBP26.03■■□□□ 1.76
LYRM4-209ENST00000606472 CHIC1Q5VXU3 224 aa25.76■■□□□ 1.71
LYRM4-209ENST00000606472 PHF23Q9BUL5 403 aaPredicted RBP22.8■■□□□ 1.24
LYRM4-209ENST00000606472 NISCHQ9Y2I1 1504 aa21.94■■□□□ 1.1
LYRM4-209ENST00000606472 SENP3Q9H4L4 574 aaPredicted RBP21.86■■□□□ 1.09
LYRM4-209ENST00000606472 PLPPR3Q6T4P5 718 aa21.03■□□□□ 0.96
LYRM4-209ENST00000606472 FOXD1Q16676 465 aa20.33■□□□□ 0.85
LYRM4-209ENST00000606472 PPP6R1Q9UPN7 881 aa19.96■□□□□ 0.79
LYRM4-209ENST00000606472 ADRA2BP18089 450 aa19.9■□□□□ 0.78
LYRM4-209ENST00000606472 CCDC180Q9P1Z9 1646 aa19.56■□□□□ 0.72
LYRM4-209ENST00000606472 ABCC9O60706 1549 aa19.22■□□□□ 0.67
LYRM4-209ENST00000606472 PIAS4Q8N2W9 510 aaPredicted RBP19.18■□□□□ 0.66
LYRM4-209ENST00000606472 KCNA4P22459 653 aa18.73■□□□□ 0.59
LYRM4-209ENST00000606472 PPP4R3CPQ6ZMV5 832 aa18.63■□□□□ 0.57
LYRM4-209ENST00000606472 MSH5O43196 834 aa18.46■□□□□ 0.55
LYRM4-209ENST00000606472 RB1CC1Q8TDY2 1594 aa18.45■□□□□ 0.54
LYRM4-209ENST00000606472 DCAF8L2P0C7V8 631 aa18.44■□□□□ 0.54
LYRM4-209ENST00000606472 NACADO15069 1562 aa18.38■□□□□ 0.53
LYRM4-209ENST00000606472 ZCCHC6Q5VYS8 1495 aaKnown RBP18.25■□□□□ 0.51
LYRM4-209ENST00000606472 MYO15BQ96JP2 1530 aa18.21■□□□□ 0.51
LYRM4-209ENST00000606472 NCBP3Q53F19 620 aaKnown RBP18.15■□□□□ 0.5
LYRM4-209ENST00000606472 DCAF1Q9Y4B6 1507 aa18.12■□□□□ 0.49
LYRM4-209ENST00000606472 UNC13AQ9UPW8 1703 aa18.09■□□□□ 0.49
LYRM4-209ENST00000606472 SCAF1Q9H7N4 1312 aaKnown RBP18.04■□□□□ 0.48
LYRM4-209ENST00000606472 NPM3O75607 178 aaKnown RBP18.03■□□□□ 0.48
LYRM4-209ENST00000606472 CNKSR2Q8WXI2 1034 aa17.99■□□□□ 0.47
LYRM4-209ENST00000606472 MAPK8IP2Q13387 824 aaPredicted RBP17.95■□□□□ 0.46
LYRM4-209ENST00000606472 PABPN1Q86U42 306 aaKnown RBP eCLIP17.95■□□□□ 0.46
LYRM4-209ENST00000606472 BICRAQ9NZM4 1560 aa17.88■□□□□ 0.45
LYRM4-209ENST00000606472 SCRIBQ14160 1630 aa17.87■□□□□ 0.45
LYRM4-209ENST00000606472 SLC4A1APQ9BWU0 796 aaKnown RBP17.83■□□□□ 0.44
LYRM4-209ENST00000606472 EHMT2Q96KQ7 1210 aa17.8■□□□□ 0.44
LYRM4-209ENST00000606472 DNAJC5BQ9UF47 199 aa17.68■□□□□ 0.42
LYRM4-209ENST00000606472 SHROOM4Q9ULL8 1493 aa17.63■□□□□ 0.41
LYRM4-209ENST00000606472 DMRT2Q9Y5R5 561 aa17.57■□□□□ 0.4
LYRM4-209ENST00000606472 RNF216Q9NWF9 866 aaPredicted RBP17.55■□□□□ 0.4
LYRM4-209ENST00000606472 CSRNP3Q8WYN3 585 aa17.54■□□□□ 0.4
LYRM4-209ENST00000606472 EIF4G1Q04637 1599 aaKnown RBP17.43■□□□□ 0.38
LYRM4-209ENST00000606472 HOXD11P31277 338 aaPredicted RBP17.42■□□□□ 0.38
LYRM4-209ENST00000606472 CC2D2AQ9P2K1 1620 aa17.39■□□□□ 0.37
LYRM4-209ENST00000606472 ZBTB22O15209 634 aa17.33■□□□□ 0.36
LYRM4-209ENST00000606472 CECR2Q9BXF3 1484 aa17.26■□□□□ 0.35
LYRM4-209ENST00000606472 SMARCA4P51532 1647 aa17.07■□□□□ 0.32
LYRM4-209ENST00000606472 FOXD4L1Q9NU39 408 aa17.05■□□□□ 0.32
LYRM4-209ENST00000606472 BAZ1AQ9NRL2 1556 aaPredicted RBP17.02■□□□□ 0.31
LYRM4-209ENST00000606472 SLC4A2P04920 1241 aa16.99■□□□□ 0.31
LYRM4-209ENST00000606472 ATAD2BQ9ULI0 1458 aa16.96■□□□□ 0.31
LYRM4-209ENST00000606472 NCAPD3P42695 1498 aa16.95■□□□□ 0.3
LYRM4-209ENST00000606472 SMARCA2P51531 1590 aa16.94■□□□□ 0.3
LYRM4-209ENST00000606472 MROH2BQ7Z745 1585 aa16.92■□□□□ 0.3
LYRM4-209ENST00000606472 HMGXB3Q12766 1538 aa16.87■□□□□ 0.29
LYRM4-209ENST00000606472 PEG3Q9GZU2 1588 aa16.86■□□□□ 0.29
LYRM4-209ENST00000606472 BAZ1BQ9UIG0 1483 aaKnown RBP16.84■□□□□ 0.29
LYRM4-209ENST00000606472 WIZO95785 1651 aa16.78■□□□□ 0.28
LYRM4-209ENST00000606472 RSF1Q96T23 1441 aaPredicted RBP16.68■□□□□ 0.26
LYRM4-209ENST00000606472 NESP48681 1621 aa16.61■□□□□ 0.25
LYRM4-209ENST00000606472 DCAF8L1A6NGE4 600 aa16.61■□□□□ 0.25
LYRM4-209ENST00000606472 MYCNP04198 464 aaPredicted RBP16.59■□□□□ 0.25
LYRM4-209ENST00000606472 ERCC6Q03468 1493 aa16.58■□□□□ 0.24
LYRM4-209ENST00000606472 LAMC3Q9Y6N6 1575 aa16.55■□□□□ 0.24
LYRM4-209ENST00000606472 TOP2AP11388 1531 aaKnown RBP16.55■□□□□ 0.24
LYRM4-209ENST00000606472 CADPSQ9ULU8 1353 aa16.46■□□□□ 0.23
LYRM4-209ENST00000606472 KIF21AQ7Z4S6 1674 aa16.46■□□□□ 0.23
LYRM4-209ENST00000606472 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.44■□□□□ 0.22
LYRM4-209ENST00000606472 ATXN8OSP0DMR3 200 aa16.43■□□□□ 0.22
LYRM4-209ENST00000606472 PDS5BQ9NTI5 1447 aa16.43■□□□□ 0.22
LYRM4-209ENST00000606472 CUX2O14529 1486 aa16.39■□□□□ 0.21
LYRM4-209ENST00000606472 THOC2Q8NI27 1593 aaKnown RBP16.38■□□□□ 0.21
LYRM4-209ENST00000606472 U3KPZ7 1027 aaPredicted RBP16.36■□□□□ 0.21
LYRM4-209ENST00000606472 CCDC88BA6NC98 1476 aa16.35■□□□□ 0.21
LYRM4-209ENST00000606472 CFTRP13569 1480 aa16.35■□□□□ 0.21
LYRM4-209ENST00000606472 PRDM2Q13029 1718 aa16.3■□□□□ 0.2
LYRM4-209ENST00000606472 FANCD2Q9BXW9 1451 aa16.29■□□□□ 0.2
LYRM4-209ENST00000606472 CEP164Q9UPV0 1460 aa16.29■□□□□ 0.2
LYRM4-209ENST00000606472 SUPT5HO00267 1087 aaKnown RBP16.26■□□□□ 0.19
LYRM4-209ENST00000606472 MRC2Q9UBG0 1479 aa16.26■□□□□ 0.19
LYRM4-209ENST00000606472 ATF5Q9Y2D1 282 aaPredicted RBP16.24■□□□□ 0.19
LYRM4-209ENST00000606472 WDR62O43379 1518 aa16.21■□□□□ 0.19
LYRM4-209ENST00000606472 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.14■□□□□ 0.17
LYRM4-209ENST00000606472 HNRNPUL2Q1KMD3 747 aaKnown RBP16.14■□□□□ 0.17
LYRM4-209ENST00000606472 SAMD1Q6SPF0 538 aaPredicted RBP16.14■□□□□ 0.17
LYRM4-209ENST00000606472 POTEDQ86YR6 584 aa16.13■□□□□ 0.17
LYRM4-209ENST00000606472 URB2Q14146 1524 aaKnown RBP16.13■□□□□ 0.17
LYRM4-209ENST00000606472 TOPBP1Q92547 1522 aa16.02■□□□□ 0.15
LYRM4-209ENST00000606472 ABCC8Q09428 1581 aa16■□□□□ 0.15
LYRM4-209ENST00000606472 DNMBPQ6XZF7 1577 aa16■□□□□ 0.15
LYRM4-209ENST00000606472 DNAJC5Q9H3Z4 198 aa15.97■□□□□ 0.15
LYRM4-209ENST00000606472 RNF39Q9H2S5 420 aa15.95■□□□□ 0.14
LYRM4-209ENST00000606472 IFT140Q96RY7 1462 aa15.92■□□□□ 0.14
LYRM4-209ENST00000606472 POLA1P09884 1462 aaPredicted RBP15.88■□□□□ 0.13
LYRM4-209ENST00000606472 CUX1P39880 1505 aa15.88■□□□□ 0.13
LYRM4-209ENST00000606472 ZNF608Q9ULD9 1512 aaPredicted RBP15.88■□□□□ 0.13
LYRM4-209ENST00000606472 TARBP1Q13395 1621 aaKnown RBP15.86■□□□□ 0.13
LYRM4-209ENST00000606472 FGD5Q6ZNL6 1462 aa15.84■□□□□ 0.13
LYRM4-209ENST00000606472 EIF4G3O43432 1585 aaKnown RBP15.83■□□□□ 0.13
LYRM4-209ENST00000606472 ZNF219Q9P2Y4 722 aaPredicted RBP15.83■□□□□ 0.12
LYRM4-209ENST00000606472 RAD54L2Q9Y4B4 1467 aa15.83■□□□□ 0.12
LYRM4-209ENST00000606472 APLP2Q06481 763 aa15.82■□□□□ 0.12
LYRM4-209ENST00000606472 SOGA1O94964 1423 aa15.82■□□□□ 0.12
LYRM4-209ENST00000606472 AQRO60306 1485 aaKnown RBP eCLIP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms