RNA–Protein interactions for RNA: ENST00000606454.1

AL390728.4-204, humanhuman

TSL 3

Gene AL390728.4, Length 660 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL390728.4-204ENST00000606454 NISCHQ9Y2I1 1504 aa36.77■■■■□ 3.48
AL390728.4-204ENST00000606454 CCDC180Q9P1Z9 1646 aa32.63■■■□□ 2.81
AL390728.4-204ENST00000606454 ABCC9O60706 1549 aa32.03■■■□□ 2.72
AL390728.4-204ENST00000606454 DCAF8L2P0C7V8 631 aa30.84■■■□□ 2.53
AL390728.4-204ENST00000606454 RB1CC1Q8TDY2 1594 aa30.78■■■□□ 2.52
AL390728.4-204ENST00000606454 NACADO15069 1562 aa30.75■■■□□ 2.51
AL390728.4-204ENST00000606454 ZCCHC6Q5VYS8 1495 aaKnown RBP30.62■■■□□ 2.49
AL390728.4-204ENST00000606454 MYO15BQ96JP2 1530 aa30.56■■■□□ 2.48
AL390728.4-204ENST00000606454 DCAF1Q9Y4B6 1507 aa30.42■■■□□ 2.46
AL390728.4-204ENST00000606454 PABPN1Q86U42 306 aaKnown RBP eCLIP29.97■■■□□ 2.39
AL390728.4-204ENST00000606454 UNC13AQ9UPW8 1703 aa29.96■■■□□ 2.39
AL390728.4-204ENST00000606454 SCRIBQ14160 1630 aa29.81■■■□□ 2.36
AL390728.4-204ENST00000606454 BICRAQ9NZM4 1560 aa29.81■■■□□ 2.36
AL390728.4-204ENST00000606454 SHROOM4Q9ULL8 1493 aa29.54■■■□□ 2.32
AL390728.4-204ENST00000606454 DNAJC5BQ9UF47 199 aa29.44■■■□□ 2.3
AL390728.4-204ENST00000606454 EIF4G1Q04637 1599 aaKnown RBP29.05■■■□□ 2.24
AL390728.4-204ENST00000606454 CC2D2AQ9P2K1 1620 aa28.93■■■□□ 2.22
AL390728.4-204ENST00000606454 CECR2Q9BXF3 1484 aa28.78■■■□□ 2.2
AL390728.4-204ENST00000606454 BAZ1AQ9NRL2 1556 aaPredicted RBP28.5■■■□□ 2.15
AL390728.4-204ENST00000606454 SMARCA4P51532 1647 aa28.5■■■□□ 2.15
AL390728.4-204ENST00000606454 ATAD2BQ9ULI0 1458 aa28.4■■■□□ 2.14
AL390728.4-204ENST00000606454 NCAPD3P42695 1498 aa28.4■■■□□ 2.14
AL390728.4-204ENST00000606454 SMARCA2P51531 1590 aa28.35■■■□□ 2.13
AL390728.4-204ENST00000606454 MROH2BQ7Z745 1585 aa28.33■■■□□ 2.13
AL390728.4-204ENST00000606454 PEG3Q9GZU2 1588 aa28.23■■■□□ 2.11
AL390728.4-204ENST00000606454 HMGXB3Q12766 1538 aa28.22■■■□□ 2.11
AL390728.4-204ENST00000606454 BAZ1BQ9UIG0 1483 aaKnown RBP28.17■■■□□ 2.1
AL390728.4-204ENST00000606454 RSF1Q96T23 1441 aaPredicted RBP28.03■■■□□ 2.08
AL390728.4-204ENST00000606454 WIZO95785 1651 aa27.99■■■□□ 2.07
AL390728.4-204ENST00000606454 TOP2AP11388 1531 aaKnown RBP27.72■■■□□ 2.03
AL390728.4-204ENST00000606454 NESP48681 1621 aa27.69■■■□□ 2.02
AL390728.4-204ENST00000606454 ERCC6Q03468 1493 aa27.63■■■□□ 2.01
AL390728.4-204ENST00000606454 LAMC3Q9Y6N6 1575 aa27.61■■■□□ 2.01
AL390728.4-204ENST00000606454 CADPSQ9ULU8 1353 aa27.6■■■□□ 2.01
AL390728.4-204ENST00000606454 PDS5BQ9NTI5 1447 aa27.5■■□□□ 1.99
AL390728.4-204ENST00000606454 CCDC88BA6NC98 1476 aa27.43■■□□□ 1.98
AL390728.4-204ENST00000606454 CFTRP13569 1480 aa27.39■■□□□ 1.98
AL390728.4-204ENST00000606454 SUPT5HO00267 1087 aaKnown RBP27.37■■□□□ 1.97
AL390728.4-204ENST00000606454 CUX2O14529 1486 aa27.32■■□□□ 1.96
AL390728.4-204ENST00000606454 KIF21AQ7Z4S6 1674 aa27.29■■□□□ 1.96
AL390728.4-204ENST00000606454 FANCD2Q9BXW9 1451 aa27.25■■□□□ 1.95
AL390728.4-204ENST00000606454 THOC2Q8NI27 1593 aaKnown RBP27.22■■□□□ 1.95
AL390728.4-204ENST00000606454 CEP164Q9UPV0 1460 aa27.21■■□□□ 1.95
AL390728.4-204ENST00000606454 MRC2Q9UBG0 1479 aa27.17■■□□□ 1.94
AL390728.4-204ENST00000606454 WDR62O43379 1518 aa27.06■■□□□ 1.92
AL390728.4-204ENST00000606454 PRDM2Q13029 1718 aa27.04■■□□□ 1.92
AL390728.4-204ENST00000606454 URB2Q14146 1524 aaKnown RBP26.95■■□□□ 1.91
AL390728.4-204ENST00000606454 ABCC8Q09428 1581 aa26.82■■□□□ 1.88
AL390728.4-204ENST00000606454 TOPBP1Q92547 1522 aa26.8■■□□□ 1.88
AL390728.4-204ENST00000606454 DNMBPQ6XZF7 1577 aa26.74■■□□□ 1.87
AL390728.4-204ENST00000606454 IFT140Q96RY7 1462 aa26.65■■□□□ 1.86
AL390728.4-204ENST00000606454 CUX1P39880 1505 aa26.58■■□□□ 1.85
AL390728.4-204ENST00000606454 POLA1P09884 1462 aaPredicted RBP26.56■■□□□ 1.84
AL390728.4-204ENST00000606454 DNAJC5Q9H3Z4 198 aa26.55■■□□□ 1.84
AL390728.4-204ENST00000606454 ZNF608Q9ULD9 1512 aaPredicted RBP26.51■■□□□ 1.83
AL390728.4-204ENST00000606454 FGD5Q6ZNL6 1462 aa26.5■■□□□ 1.83
AL390728.4-204ENST00000606454 SOGA1O94964 1423 aa26.5■■□□□ 1.83
AL390728.4-204ENST00000606454 RAD54L2Q9Y4B4 1467 aa26.47■■□□□ 1.83
AL390728.4-204ENST00000606454 TARBP1Q13395 1621 aaKnown RBP26.47■■□□□ 1.83
AL390728.4-204ENST00000606454 WRNQ14191 1432 aaPredicted RBP eCLIP26.44■■□□□ 1.82
AL390728.4-204ENST00000606454 AQRO60306 1485 aaKnown RBP eCLIP26.39■■□□□ 1.821e-167■■■■■ 182.3
AL390728.4-204ENST00000606454 EIF4G3O43432 1585 aaKnown RBP26.37■■□□□ 1.81
AL390728.4-204ENST00000606454 TDRD9Q8NDG6 1382 aaKnown RBP26.35■■□□□ 1.81
AL390728.4-204ENST00000606454 TOP2BQ02880 1626 aa26.33■■□□□ 1.81
AL390728.4-204ENST00000606454 SYNJ1O43426 1573 aa26.31■■□□□ 1.8
AL390728.4-204ENST00000606454 BIVM-ERCC5R4GMW8 1640 aa26.3■■□□□ 1.8
AL390728.4-204ENST00000606454 WDR97A6NE52 1622 aa26.26■■□□□ 1.79
AL390728.4-204ENST00000606454 ABCA10Q8WWZ4 1543 aa26.25■■□□□ 1.79
AL390728.4-204ENST00000606454 OSCARQ8IYS5 282 aa26.25■■□□□ 1.79
AL390728.4-204ENST00000606454 GRIN2BQ13224 1484 aa26.17■■□□□ 1.78
AL390728.4-204ENST00000606454 GAPVD1Q14C86 1478 aa26.17■■□□□ 1.78
AL390728.4-204ENST00000606454 FBLN2P98095 1184 aa26.13■■□□□ 1.77
AL390728.4-204ENST00000606454 SNAPC4Q5SXM2 1469 aa26.12■■□□□ 1.77
AL390728.4-204ENST00000606454 MAGI1Q96QZ7 1491 aaPredicted RBP26.1■■□□□ 1.77
AL390728.4-204ENST00000606454 ABCA5Q8WWZ7 1642 aa26.1■■□□□ 1.77
AL390728.4-204ENST00000606454 CHMP7Q8WUX9 453 aaPredicted RBP26.05■■□□□ 1.76
AL390728.4-204ENST00000606454 PBRM1Q86U86 1689 aa26.02■■□□□ 1.76
AL390728.4-204ENST00000606454 SYNJ2O15056 1496 aa26■■□□□ 1.75
AL390728.4-204ENST00000606454 CHD1O14646 1710 aa26■■□□□ 1.75
AL390728.4-204ENST00000606454 ERICH3Q5RHP9 1530 aa25.93■■□□□ 1.74
AL390728.4-204ENST00000606454 KIF27Q86VH2 1401 aa25.9■■□□□ 1.74
AL390728.4-204ENST00000606454 FHAD1B1AJZ9 1412 aa25.88■■□□□ 1.73
AL390728.4-204ENST00000606454 TRIM41Q8WV44 630 aa25.87■■□□□ 1.73
AL390728.4-204ENST00000606454 ADAMTS12P58397 1594 aa25.86■■□□□ 1.73
AL390728.4-204ENST00000606454 GRIN2AQ12879 1464 aa25.83■■□□□ 1.73
AL390728.4-204ENST00000606454 IGF1RP08069 1367 aa25.81■■□□□ 1.72
AL390728.4-204ENST00000606454 CLASP1Q7Z460 1538 aa25.77■■□□□ 1.72
AL390728.4-204ENST00000606454 ARHGEF11O15085 1522 aa25.75■■□□□ 1.71
AL390728.4-204ENST00000606454 RIMBP3CA6NJZ7 1639 aa25.72■■□□□ 1.71
AL390728.4-204ENST00000606454 RIMBP3BA6NNM3 1639 aa25.72■■□□□ 1.71
AL390728.4-204ENST00000606454 RIMBP3Q9UFD9 1639 aa25.72■■□□□ 1.71
AL390728.4-204ENST00000606454 NUP160Q12769 1436 aa25.71■■□□□ 1.71
AL390728.4-204ENST00000606454 CEP170Q5SW79 1584 aa25.66■■□□□ 1.7
AL390728.4-204ENST00000606454 CARMIL1Q5VZK9 1371 aa25.66■■□□□ 1.7
AL390728.4-204ENST00000606454 CUL7Q14999 1698 aa25.65■■□□□ 1.7
AL390728.4-204ENST00000606454 RUSC2Q8N2Y8 1516 aa25.63■■□□□ 1.69
AL390728.4-204ENST00000606454 CYB5RLQ6IPT4 315 aa25.59■■□□□ 1.69
AL390728.4-204ENST00000606454 ARAP1Q96P48 1450 aa25.54■■□□□ 1.68
AL390728.4-204ENST00000606454 CHIC1Q5VXU3 224 aa25.52■■□□□ 1.68
AL390728.4-204ENST00000606454 JPH4Q96JJ6 628 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms