RNA–Protein interactions for RNA: ENST00000606173.1

AL390728.4-202, humanhuman

TSL 3 BASIC

Gene AL390728.4, Length 430 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL390728.4-202ENST00000606173 NISCHQ9Y2I1 1504 aa29.34■■■□□ 2.29
AL390728.4-202ENST00000606173 CCDC180Q9P1Z9 1646 aa26.24■■□□□ 1.79
AL390728.4-202ENST00000606173 ABCC9O60706 1549 aa25.78■■□□□ 1.72
AL390728.4-202ENST00000606173 RB1CC1Q8TDY2 1594 aa24.83■■□□□ 1.57
AL390728.4-202ENST00000606173 NACADO15069 1562 aa24.76■■□□□ 1.55
AL390728.4-202ENST00000606173 MYO15BQ96JP2 1530 aa24.59■■□□□ 1.53
AL390728.4-202ENST00000606173 DCAF8L2P0C7V8 631 aa24.55■■□□□ 1.52
AL390728.4-202ENST00000606173 ZCCHC6Q5VYS8 1495 aaKnown RBP24.39■■□□□ 1.5
AL390728.4-202ENST00000606173 DCAF1Q9Y4B6 1507 aa24.35■■□□□ 1.49
AL390728.4-202ENST00000606173 UNC13AQ9UPW8 1703 aa24.05■■□□□ 1.44
AL390728.4-202ENST00000606173 PABPN1Q86U42 306 aaKnown RBP eCLIP24.01■■□□□ 1.43
AL390728.4-202ENST00000606173 SHROOM4Q9ULL8 1493 aa23.94■■□□□ 1.42
AL390728.4-202ENST00000606173 BICRAQ9NZM4 1560 aa23.93■■□□□ 1.42
AL390728.4-202ENST00000606173 SCRIBQ14160 1630 aa23.8■■□□□ 1.4
AL390728.4-202ENST00000606173 DNAJC5BQ9UF47 199 aa23.76■■□□□ 1.39
AL390728.4-202ENST00000606173 EIF4G1Q04637 1599 aaKnown RBP23.4■■□□□ 1.34
AL390728.4-202ENST00000606173 CC2D2AQ9P2K1 1620 aa23.33■■□□□ 1.32
AL390728.4-202ENST00000606173 CECR2Q9BXF3 1484 aa23.25■■□□□ 1.31
AL390728.4-202ENST00000606173 NCAPD3P42695 1498 aa22.82■■□□□ 1.24
AL390728.4-202ENST00000606173 BAZ1AQ9NRL2 1556 aaPredicted RBP22.81■■□□□ 1.24
AL390728.4-202ENST00000606173 SMARCA4P51532 1647 aa22.79■■□□□ 1.24
AL390728.4-202ENST00000606173 SMARCA2P51531 1590 aa22.79■■□□□ 1.24
AL390728.4-202ENST00000606173 ATAD2BQ9ULI0 1458 aa22.74■■□□□ 1.23
AL390728.4-202ENST00000606173 HMGXB3Q12766 1538 aa22.7■■□□□ 1.22
AL390728.4-202ENST00000606173 PEG3Q9GZU2 1588 aa22.63■■□□□ 1.21
AL390728.4-202ENST00000606173 BAZ1BQ9UIG0 1483 aaKnown RBP22.58■■□□□ 1.2
AL390728.4-202ENST00000606173 MROH2BQ7Z745 1585 aa22.52■■□□□ 1.2
AL390728.4-202ENST00000606173 ERCC6Q03468 1493 aa22.34■■□□□ 1.17
AL390728.4-202ENST00000606173 LAMC3Q9Y6N6 1575 aa22.26■■□□□ 1.15
AL390728.4-202ENST00000606173 WIZO95785 1651 aa22.24■■□□□ 1.15
AL390728.4-202ENST00000606173 CUX2O14529 1486 aa22.23■■□□□ 1.15
AL390728.4-202ENST00000606173 RSF1Q96T23 1441 aaPredicted RBP22.23■■□□□ 1.15
AL390728.4-202ENST00000606173 NESP48681 1621 aa22.18■■□□□ 1.14
AL390728.4-202ENST00000606173 PDS5BQ9NTI5 1447 aa22.16■■□□□ 1.14
AL390728.4-202ENST00000606173 CADPSQ9ULU8 1353 aa22.13■■□□□ 1.13
AL390728.4-202ENST00000606173 TOP2AP11388 1531 aaKnown RBP22.11■■□□□ 1.13
AL390728.4-202ENST00000606173 THOC2Q8NI27 1593 aaKnown RBP21.96■■□□□ 1.11
AL390728.4-202ENST00000606173 CFTRP13569 1480 aa21.94■■□□□ 1.1
AL390728.4-202ENST00000606173 KIF21AQ7Z4S6 1674 aa21.93■■□□□ 1.1
AL390728.4-202ENST00000606173 MRC2Q9UBG0 1479 aa21.89■■□□□ 1.09
AL390728.4-202ENST00000606173 CEP164Q9UPV0 1460 aa21.88■■□□□ 1.09
AL390728.4-202ENST00000606173 FANCD2Q9BXW9 1451 aa21.85■■□□□ 1.09
AL390728.4-202ENST00000606173 WDR62O43379 1518 aa21.81■■□□□ 1.08
AL390728.4-202ENST00000606173 CCDC88BA6NC98 1476 aa21.79■■□□□ 1.08
AL390728.4-202ENST00000606173 DNAJC5Q9H3Z4 198 aa21.75■■□□□ 1.07
AL390728.4-202ENST00000606173 PRDM2Q13029 1718 aa21.72■■□□□ 1.07
AL390728.4-202ENST00000606173 ABCC8Q09428 1581 aa21.59■■□□□ 1.05
AL390728.4-202ENST00000606173 URB2Q14146 1524 aaKnown RBP21.59■■□□□ 1.05
AL390728.4-202ENST00000606173 IFT140Q96RY7 1462 aa21.45■■□□□ 1.03
AL390728.4-202ENST00000606173 TOPBP1Q92547 1522 aa21.45■■□□□ 1.02
AL390728.4-202ENST00000606173 SUPT5HO00267 1087 aaKnown RBP21.45■■□□□ 1.02
AL390728.4-202ENST00000606173 DNMBPQ6XZF7 1577 aa21.44■■□□□ 1.02
AL390728.4-202ENST00000606173 POLA1P09884 1462 aaPredicted RBP21.26■□□□□ 0.99
AL390728.4-202ENST00000606173 OSCARQ8IYS5 282 aa21.25■□□□□ 0.99
AL390728.4-202ENST00000606173 ZNF608Q9ULD9 1512 aaPredicted RBP21.24■□□□□ 0.99
AL390728.4-202ENST00000606173 TARBP1Q13395 1621 aaKnown RBP21.21■□□□□ 0.99
AL390728.4-202ENST00000606173 WDR97A6NE52 1622 aa21.2■□□□□ 0.98
AL390728.4-202ENST00000606173 SOGA1O94964 1423 aa21.2■□□□□ 0.98
AL390728.4-202ENST00000606173 EIF4G3O43432 1585 aaKnown RBP21.19■□□□□ 0.98
AL390728.4-202ENST00000606173 CUX1P39880 1505 aa21.16■□□□□ 0.98
AL390728.4-202ENST00000606173 FGD5Q6ZNL6 1462 aa21.16■□□□□ 0.98
AL390728.4-202ENST00000606173 AQRO60306 1485 aaKnown RBP eCLIP21.11■□□□□ 0.976e-15■■■■■ 150.9
AL390728.4-202ENST00000606173 RAD54L2Q9Y4B4 1467 aa21.1■□□□□ 0.97
AL390728.4-202ENST00000606173 TDRD9Q8NDG6 1382 aaKnown RBP21.04■□□□□ 0.96
AL390728.4-202ENST00000606173 WRNQ14191 1432 aaPredicted RBP eCLIP21.03■□□□□ 0.96
AL390728.4-202ENST00000606173 GRIN2BQ13224 1484 aa21.01■□□□□ 0.95
AL390728.4-202ENST00000606173 MAGI1Q96QZ7 1491 aaPredicted RBP21.01■□□□□ 0.95
AL390728.4-202ENST00000606173 ABCA10Q8WWZ4 1543 aa21■□□□□ 0.95
AL390728.4-202ENST00000606173 TOP2BQ02880 1626 aa20.98■□□□□ 0.95
AL390728.4-202ENST00000606173 BIVM-ERCC5R4GMW8 1640 aa20.96■□□□□ 0.95
AL390728.4-202ENST00000606173 FBLN2P98095 1184 aa20.95■□□□□ 0.94
AL390728.4-202ENST00000606173 GAPVD1Q14C86 1478 aa20.94■□□□□ 0.94
AL390728.4-202ENST00000606173 SNAPC4Q5SXM2 1469 aa20.94■□□□□ 0.94
AL390728.4-202ENST00000606173 CHD1O14646 1710 aa20.92■□□□□ 0.94
AL390728.4-202ENST00000606173 CHMP7Q8WUX9 453 aaPredicted RBP20.91■□□□□ 0.94
AL390728.4-202ENST00000606173 SYNJ2O15056 1496 aa20.9■□□□□ 0.94
AL390728.4-202ENST00000606173 ABCA5Q8WWZ7 1642 aa20.89■□□□□ 0.93
AL390728.4-202ENST00000606173 SYNJ1O43426 1573 aa20.89■□□□□ 0.93
AL390728.4-202ENST00000606173 TRIM41Q8WV44 630 aa20.86■□□□□ 0.93
AL390728.4-202ENST00000606173 PBRM1Q86U86 1689 aa20.86■□□□□ 0.93
AL390728.4-202ENST00000606173 ARHGEF11O15085 1522 aa20.83■□□□□ 0.93
AL390728.4-202ENST00000606173 RIMBP3CA6NJZ7 1639 aa20.82■□□□□ 0.92
AL390728.4-202ENST00000606173 RIMBP3BA6NNM3 1639 aa20.82■□□□□ 0.92
AL390728.4-202ENST00000606173 RIMBP3Q9UFD9 1639 aa20.82■□□□□ 0.92
AL390728.4-202ENST00000606173 ERICH3Q5RHP9 1530 aa20.78■□□□□ 0.92
AL390728.4-202ENST00000606173 CLASP1Q7Z460 1538 aa20.75■□□□□ 0.91
AL390728.4-202ENST00000606173 FHAD1B1AJZ9 1412 aa20.73■□□□□ 0.91
AL390728.4-202ENST00000606173 ADAMTS12P58397 1594 aa20.72■□□□□ 0.91
AL390728.4-202ENST00000606173 GRIN2AQ12879 1464 aa20.71■□□□□ 0.91
AL390728.4-202ENST00000606173 KIF27Q86VH2 1401 aa20.65■□□□□ 0.9
AL390728.4-202ENST00000606173 CYB5RLQ6IPT4 315 aa20.64■□□□□ 0.89
AL390728.4-202ENST00000606173 NUP160Q12769 1436 aa20.63■□□□□ 0.89
AL390728.4-202ENST00000606173 ARAP1Q96P48 1450 aa20.62■□□□□ 0.89
AL390728.4-202ENST00000606173 CEP170Q5SW79 1584 aa20.55■□□□□ 0.88
AL390728.4-202ENST00000606173 CUL7Q14999 1698 aa20.54■□□□□ 0.88
AL390728.4-202ENST00000606173 IGF1RP08069 1367 aa20.5■□□□□ 0.87
AL390728.4-202ENST00000606173 SHROOM2Q13796 1616 aa20.47■□□□□ 0.87
AL390728.4-202ENST00000606173 CARMIL1Q5VZK9 1371 aa20.42■□□□□ 0.86
AL390728.4-202ENST00000606173 JPH4Q96JJ6 628 aa20.41■□□□□ 0.86
AL390728.4-202ENST00000606173 RUSC2Q8N2Y8 1516 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms