RNA–Protein interactions for RNA: ENST00000605909.1

LINC02343-201, Transcript of long intergenic non-protein coding RNA 2343, humanhuman

TSL 4 BASIC

Gene LINC02343, Length 573 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02343-201ENST00000605909 AEBP2Q6ZN18 517 aaPredicted RBP19.16■□□□□ 0.66
LINC02343-201ENST00000605909 CHIC1Q5VXU3 224 aa18.18■□□□□ 0.5
LINC02343-201ENST00000605909 SENP3Q9H4L4 574 aaPredicted RBP16.72■□□□□ 0.27
LINC02343-201ENST00000605909 PHF23Q9BUL5 403 aaPredicted RBP16.31■□□□□ 0.2
LINC02343-201ENST00000605909 POTEDQ86YR6 584 aa15.85■□□□□ 0.13
LINC02343-201ENST00000605909 FOXD1Q16676 465 aa15.53■□□□□ 0.08
LINC02343-201ENST00000605909 MSH5O43196 834 aa15.03■□□□□ -0
LINC02343-201ENST00000605909 NISCHQ9Y2I1 1504 aa14.6□□□□□ -0.07
LINC02343-201ENST00000605909 PIAS4Q8N2W9 510 aaPredicted RBP14.41□□□□□ -0.1
LINC02343-201ENST00000605909 PPP6R1Q9UPN7 881 aa13.83□□□□□ -0.2
LINC02343-201ENST00000605909 ADRA2BP18089 450 aa13.8□□□□□ -0.2
LINC02343-201ENST00000605909 PLPPR3Q6T4P5 718 aa13.79□□□□□ -0.2
LINC02343-201ENST00000605909 ABCC9O60706 1549 aa13.78□□□□□ -0.2
LINC02343-201ENST00000605909 CCDC180Q9P1Z9 1646 aa13.42□□□□□ -0.26
LINC02343-201ENST00000605909 DNAJC5BQ9UF47 199 aa13.38□□□□□ -0.27
LINC02343-201ENST00000605909 CACNB1Q02641 598 aaPredicted RBP13.37□□□□□ -0.27
LINC02343-201ENST00000605909 DMRT2Q9Y5R5 561 aa13.05□□□□□ -0.32
LINC02343-201ENST00000605909 RB1CC1Q8TDY2 1594 aa12.96□□□□□ -0.33
LINC02343-201ENST00000605909 SCAF1Q9H7N4 1312 aaKnown RBP12.92□□□□□ -0.34
LINC02343-201ENST00000605909 MAPK8IP2Q13387 824 aaPredicted RBP12.88□□□□□ -0.35
LINC02343-201ENST00000605909 NACADO15069 1562 aa12.75□□□□□ -0.37
LINC02343-201ENST00000605909 UNC13AQ9UPW8 1703 aa12.74□□□□□ -0.37
LINC02343-201ENST00000605909 PABPN1Q86U42 306 aaKnown RBP eCLIP12.68□□□□□ -0.38
LINC02343-201ENST00000605909 DNAJC5Q9H3Z4 198 aa12.68□□□□□ -0.38
LINC02343-201ENST00000605909 DCAF8L1A6NGE4 600 aa12.66□□□□□ -0.38
LINC02343-201ENST00000605909 BICRAQ9NZM4 1560 aa12.64□□□□□ -0.39
LINC02343-201ENST00000605909 RNF39Q9H2S5 420 aa12.63□□□□□ -0.39
LINC02343-201ENST00000605909 C1QBPQ07021 282 aaKnown RBP12.51□□□□□ -0.41
LINC02343-201ENST00000605909 CC2D2AQ9P2K1 1620 aa12.49□□□□□ -0.41
LINC02343-201ENST00000605909 CECR2Q9BXF3 1484 aa12.49□□□□□ -0.41
LINC02343-201ENST00000605909 MYO15BQ96JP2 1530 aa12.45□□□□□ -0.42
LINC02343-201ENST00000605909 SHROOM4Q9ULL8 1493 aa12.44□□□□□ -0.42
LINC02343-201ENST00000605909 EIF4G1Q04637 1599 aaKnown RBP12.35□□□□□ -0.43
LINC02343-201ENST00000605909 DCAF8L2P0C7V8 631 aa12.34□□□□□ -0.43
LINC02343-201ENST00000605909 POTEHQ6S545 545 aa12.33□□□□□ -0.44
LINC02343-201ENST00000605909 HOXD11P31277 338 aaPredicted RBP12.26□□□□□ -0.45
LINC02343-201ENST00000605909 CUX2O14529 1486 aa12.17□□□□□ -0.46
LINC02343-201ENST00000605909 SCRIBQ14160 1630 aa12.1□□□□□ -0.47
LINC02343-201ENST00000605909 DCAF1Q9Y4B6 1507 aa12.08□□□□□ -0.48
LINC02343-201ENST00000605909 ZCCHC6Q5VYS8 1495 aaKnown RBP12.02□□□□□ -0.49
LINC02343-201ENST00000605909 RNF216Q9NWF9 866 aaPredicted RBP12.01□□□□□ -0.49
LINC02343-201ENST00000605909 CNKSR2Q8WXI2 1034 aa11.93□□□□□ -0.5
LINC02343-201ENST00000605909 ERCC6Q03468 1493 aa11.93□□□□□ -0.5
LINC02343-201ENST00000605909 PPP4R3CPQ6ZMV5 832 aa11.9□□□□□ -0.5
LINC02343-201ENST00000605909 TRIM41Q8WV44 630 aa11.82□□□□□ -0.52
LINC02343-201ENST00000605909 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.79□□□□□ -0.52
LINC02343-201ENST00000605909 THOC2Q8NI27 1593 aaKnown RBP11.79□□□□□ -0.52
LINC02343-201ENST00000605909 NCAPD3P42695 1498 aa11.76□□□□□ -0.53
LINC02343-201ENST00000605909 NESP48681 1621 aa11.71□□□□□ -0.54
LINC02343-201ENST00000605909 HMGXB3Q12766 1538 aa11.67□□□□□ -0.54
LINC02343-201ENST00000605909 ATAD2BQ9ULI0 1458 aa11.63□□□□□ -0.55
LINC02343-201ENST00000605909 KIF21AQ7Z4S6 1674 aa11.62□□□□□ -0.55
LINC02343-201ENST00000605909 LAMC3Q9Y6N6 1575 aa11.61□□□□□ -0.55
LINC02343-201ENST00000605909 SMARCA2P51531 1590 aa11.6□□□□□ -0.55
LINC02343-201ENST00000605909 BAZ1AQ9NRL2 1556 aaPredicted RBP11.55□□□□□ -0.56
LINC02343-201ENST00000605909 DSG3P32926 999 aa11.55□□□□□ -0.56
LINC02343-201ENST00000605909 SMARCA4P51532 1647 aa11.53□□□□□ -0.56
LINC02343-201ENST00000605909 CAPN15O75808 1086 aa11.53□□□□□ -0.56
LINC02343-201ENST00000605909 PDS5BQ9NTI5 1447 aa11.49□□□□□ -0.57
LINC02343-201ENST00000605909 WDR62O43379 1518 aa11.49□□□□□ -0.57
LINC02343-201ENST00000605909 BAZ1BQ9UIG0 1483 aaKnown RBP11.48□□□□□ -0.57
LINC02343-201ENST00000605909 PEG3Q9GZU2 1588 aa11.46□□□□□ -0.57
LINC02343-201ENST00000605909 MRC2Q9UBG0 1479 aa11.45□□□□□ -0.58
LINC02343-201ENST00000605909 RIMBP3CA6NJZ7 1639 aa11.43□□□□□ -0.58
LINC02343-201ENST00000605909 RIMBP3BA6NNM3 1639 aa11.43□□□□□ -0.58
LINC02343-201ENST00000605909 RIMBP3Q9UFD9 1639 aa11.43□□□□□ -0.58
LINC02343-201ENST00000605909 OSCARQ8IYS5 282 aa11.41□□□□□ -0.58
LINC02343-201ENST00000605909 NCBP3Q53F19 620 aaKnown RBP11.39□□□□□ -0.59
LINC02343-201ENST00000605909 SPINK5Q9NQ38 1064 aaPredicted RBP11.35□□□□□ -0.59
LINC02343-201ENST00000605909 CADPSQ9ULU8 1353 aa11.33□□□□□ -0.6
LINC02343-201ENST00000605909 ARHGEF11O15085 1522 aa11.32□□□□□ -0.6
LINC02343-201ENST00000605909 U3KPZ7 1027 aaPredicted RBP11.29□□□□□ -0.6
LINC02343-201ENST00000605909 CEP164Q9UPV0 1460 aa11.29□□□□□ -0.6
LINC02343-201ENST00000605909 APLP2Q06481 763 aa11.23□□□□□ -0.61
LINC02343-201ENST00000605909 RBM42Q9BTD8 480 aaKnown RBP11.23□□□□□ -0.61
LINC02343-201ENST00000605909 MROH2BQ7Z745 1585 aa11.23□□□□□ -0.61
LINC02343-201ENST00000605909 FANCD2Q9BXW9 1451 aa11.22□□□□□ -0.61
LINC02343-201ENST00000605909 SP7Q8TDD2 431 aaPredicted RBP11.2□□□□□ -0.62
LINC02343-201ENST00000605909 CHRDL2Q6WN34 429 aa11.18□□□□□ -0.62
LINC02343-201ENST00000605909 URB2Q14146 1524 aaKnown RBP11.18□□□□□ -0.62
LINC02343-201ENST00000605909 TRHP20396 242 aaPredicted RBP11.17□□□□□ -0.62
LINC02343-201ENST00000605909 ARAP1Q96P48 1450 aa11.17□□□□□ -0.62
LINC02343-201ENST00000605909 CYB5RLQ6IPT4 315 aa11.15□□□□□ -0.62
LINC02343-201ENST00000605909 ZNF219Q9P2Y4 722 aaPredicted RBP11.15□□□□□ -0.62
LINC02343-201ENST00000605909 CFTRP13569 1480 aa11.13□□□□□ -0.63
LINC02343-201ENST00000605909 ZNF608Q9ULD9 1512 aaPredicted RBP11.11□□□□□ -0.63
LINC02343-201ENST00000605909 CHD1O14646 1710 aa11.11□□□□□ -0.63
LINC02343-201ENST00000605909 RSF1Q96T23 1441 aaPredicted RBP11.09□□□□□ -0.63
LINC02343-201ENST00000605909 IFT140Q96RY7 1462 aa11.09□□□□□ -0.63
LINC02343-201ENST00000605909 PRDM2Q13029 1718 aa11.09□□□□□ -0.63
LINC02343-201ENST00000605909 ABCB7O75027 752 aa11.08□□□□□ -0.64
LINC02343-201ENST00000605909 WIZO95785 1651 aa11.08□□□□□ -0.64
LINC02343-201ENST00000605909 EIF4G3O43432 1585 aaKnown RBP11.07□□□□□ -0.64
LINC02343-201ENST00000605909 NPM3O75607 178 aaKnown RBP10.99□□□□□ -0.65
LINC02343-201ENST00000605909 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.97□□□□□ -0.65
LINC02343-201ENST00000605909 HNRNPUL2Q1KMD3 747 aaKnown RBP10.97□□□□□ -0.65
LINC02343-201ENST00000605909 TARBP1Q13395 1621 aaKnown RBP10.96□□□□□ -0.65
LINC02343-201ENST00000605909 CLASP1Q7Z460 1538 aa10.96□□□□□ -0.65
LINC02343-201ENST00000605909 TOPBP1Q92547 1522 aa10.96□□□□□ -0.65
LINC02343-201ENST00000605909 TOP2AP11388 1531 aaKnown RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms