RNA–Protein interactions for RNA: ENST00000604010.1

SRGAP2-207, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

TSL 5

Gene SRGAP2, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-207ENST00000604010 NISCHQ9Y2I1 1504 aa32.73■■■□□ 2.83
SRGAP2-207ENST00000604010 CCDC180Q9P1Z9 1646 aa29.06■■■□□ 2.24
SRGAP2-207ENST00000604010 ABCC9O60706 1549 aa27.87■■■□□ 2.05
SRGAP2-207ENST00000604010 ZCCHC6Q5VYS8 1495 aaKnown RBP27.35■■□□□ 1.97
SRGAP2-207ENST00000604010 DCAF1Q9Y4B6 1507 aa27.16■■□□□ 1.94
SRGAP2-207ENST00000604010 NACADO15069 1562 aa27.15■■□□□ 1.94
SRGAP2-207ENST00000604010 MYO15BQ96JP2 1530 aa27.13■■□□□ 1.93
SRGAP2-207ENST00000604010 RB1CC1Q8TDY2 1594 aa27.08■■□□□ 1.93
SRGAP2-207ENST00000604010 DCAF8L2P0C7V8 631 aa27.02■■□□□ 1.92
SRGAP2-207ENST00000604010 UNC13AQ9UPW8 1703 aa26.65■■□□□ 1.86
SRGAP2-207ENST00000604010 SCRIBQ14160 1630 aa26.41■■□□□ 1.82
SRGAP2-207ENST00000604010 BICRAQ9NZM4 1560 aa26.25■■□□□ 1.79
SRGAP2-207ENST00000604010 PABPN1Q86U42 306 aaKnown RBP eCLIP26.03■■□□□ 1.76
SRGAP2-207ENST00000604010 SHROOM4Q9ULL8 1493 aa26.03■■□□□ 1.76
SRGAP2-207ENST00000604010 EIF4G1Q04637 1599 aaKnown RBP25.5■■□□□ 1.67
SRGAP2-207ENST00000604010 CECR2Q9BXF3 1484 aa25.4■■□□□ 1.66
SRGAP2-207ENST00000604010 SMARCA4P51532 1647 aa25.36■■□□□ 1.65
SRGAP2-207ENST00000604010 BAZ1AQ9NRL2 1556 aaPredicted RBP25.35■■□□□ 1.65
SRGAP2-207ENST00000604010 CC2D2AQ9P2K1 1620 aa25.31■■□□□ 1.64
SRGAP2-207ENST00000604010 MROH2BQ7Z745 1585 aa25.21■■□□□ 1.63
SRGAP2-207ENST00000604010 DNAJC5BQ9UF47 199 aa25.18■■□□□ 1.62
SRGAP2-207ENST00000604010 PEG3Q9GZU2 1588 aa25.13■■□□□ 1.61
SRGAP2-207ENST00000604010 SMARCA2P51531 1590 aa25.1■■□□□ 1.61
SRGAP2-207ENST00000604010 ATAD2BQ9ULI0 1458 aa25.06■■□□□ 1.6
SRGAP2-207ENST00000604010 RSF1Q96T23 1441 aaPredicted RBP25.03■■□□□ 1.6
SRGAP2-207ENST00000604010 WIZO95785 1651 aa25.02■■□□□ 1.6
SRGAP2-207ENST00000604010 NCAPD3P42695 1498 aa25■■□□□ 1.59
SRGAP2-207ENST00000604010 HMGXB3Q12766 1538 aa24.96■■□□□ 1.59
SRGAP2-207ENST00000604010 BAZ1BQ9UIG0 1483 aaKnown RBP24.87■■□□□ 1.57
SRGAP2-207ENST00000604010 TOP2AP11388 1531 aaKnown RBP24.76■■□□□ 1.55
SRGAP2-207ENST00000604010 SUPT5HO00267 1087 aaKnown RBP24.6■■□□□ 1.53
SRGAP2-207ENST00000604010 CCDC88BA6NC98 1476 aa24.41■■□□□ 1.5
SRGAP2-207ENST00000604010 LAMC3Q9Y6N6 1575 aa24.33■■□□□ 1.49
SRGAP2-207ENST00000604010 PRDM2Q13029 1718 aa24.32■■□□□ 1.48
SRGAP2-207ENST00000604010 CADPSQ9ULU8 1353 aa24.26■■□□□ 1.47
SRGAP2-207ENST00000604010 NESP48681 1621 aa24.24■■□□□ 1.47
SRGAP2-207ENST00000604010 CFTRP13569 1480 aa24.22■■□□□ 1.47
SRGAP2-207ENST00000604010 KIF21AQ7Z4S6 1674 aa24.11■■□□□ 1.45
SRGAP2-207ENST00000604010 PDS5BQ9NTI5 1447 aa24.08■■□□□ 1.44
SRGAP2-207ENST00000604010 ERCC6Q03468 1493 aa23.99■■□□□ 1.43
SRGAP2-207ENST00000604010 FANCD2Q9BXW9 1451 aa23.99■■□□□ 1.43
SRGAP2-207ENST00000604010 CEP164Q9UPV0 1460 aa23.94■■□□□ 1.42
SRGAP2-207ENST00000604010 THOC2Q8NI27 1593 aaKnown RBP23.89■■□□□ 1.41
SRGAP2-207ENST00000604010 MRC2Q9UBG0 1479 aa23.81■■□□□ 1.4
SRGAP2-207ENST00000604010 WDR62O43379 1518 aa23.76■■□□□ 1.39
SRGAP2-207ENST00000604010 URB2Q14146 1524 aaKnown RBP23.74■■□□□ 1.39
SRGAP2-207ENST00000604010 ABCC8Q09428 1581 aa23.73■■□□□ 1.39
SRGAP2-207ENST00000604010 DNMBPQ6XZF7 1577 aa23.71■■□□□ 1.39
SRGAP2-207ENST00000604010 TOPBP1Q92547 1522 aa23.68■■□□□ 1.38
SRGAP2-207ENST00000604010 CUX2O14529 1486 aa23.66■■□□□ 1.38
SRGAP2-207ENST00000604010 CUX1P39880 1505 aa23.64■■□□□ 1.37
SRGAP2-207ENST00000604010 BIVM-ERCC5R4GMW8 1640 aa23.62■■□□□ 1.37
SRGAP2-207ENST00000604010 WRNQ14191 1432 aaPredicted RBP eCLIP23.59■■□□□ 1.37
SRGAP2-207ENST00000604010 TOP2BQ02880 1626 aa23.59■■□□□ 1.37
SRGAP2-207ENST00000604010 SYNJ1O43426 1573 aa23.57■■□□□ 1.36
SRGAP2-207ENST00000604010 POLA1P09884 1462 aaPredicted RBP23.49■■□□□ 1.35
SRGAP2-207ENST00000604010 FGD5Q6ZNL6 1462 aa23.48■■□□□ 1.35
SRGAP2-207ENST00000604010 TARBP1Q13395 1621 aaKnown RBP23.44■■□□□ 1.34
SRGAP2-207ENST00000604010 IFT140Q96RY7 1462 aa23.42■■□□□ 1.34
SRGAP2-207ENST00000604010 WDR97A6NE52 1622 aa23.41■■□□□ 1.34
SRGAP2-207ENST00000604010 SOGA1O94964 1423 aa23.36■■□□□ 1.33
SRGAP2-207ENST00000604010 RAD54L2Q9Y4B4 1467 aa23.35■■□□□ 1.33
SRGAP2-207ENST00000604010 ABCA10Q8WWZ4 1543 aa23.3■■□□□ 1.32
SRGAP2-207ENST00000604010 TRIM41Q8WV44 630 aa23.25■■□□□ 1.31
SRGAP2-207ENST00000604010 EIF4G3O43432 1585 aaKnown RBP23.25■■□□□ 1.31
SRGAP2-207ENST00000604010 ZNF608Q9ULD9 1512 aaPredicted RBP23.24■■□□□ 1.31
SRGAP2-207ENST00000604010 CHIC1Q5VXU3 224 aa23.24■■□□□ 1.31
SRGAP2-207ENST00000604010 ABCA5Q8WWZ7 1642 aa23.22■■□□□ 1.31
SRGAP2-207ENST00000604010 PBRM1Q86U86 1689 aa23.19■■□□□ 1.3
SRGAP2-207ENST00000604010 AQRO60306 1485 aaKnown RBP eCLIP23.15■■□□□ 1.3
SRGAP2-207ENST00000604010 TDRD9Q8NDG6 1382 aaKnown RBP23.14■■□□□ 1.3
SRGAP2-207ENST00000604010 GAPVD1Q14C86 1478 aa23.12■■□□□ 1.29
SRGAP2-207ENST00000604010 KIF27Q86VH2 1401 aa23.08■■□□□ 1.28
SRGAP2-207ENST00000604010 GRIN2BQ13224 1484 aa23.07■■□□□ 1.28
SRGAP2-207ENST00000604010 ERICH3Q5RHP9 1530 aa23.05■■□□□ 1.28
SRGAP2-207ENST00000604010 MAGI1Q96QZ7 1491 aaPredicted RBP22.99■■□□□ 1.27
SRGAP2-207ENST00000604010 RUSC2Q8N2Y8 1516 aa22.98■■□□□ 1.27
SRGAP2-207ENST00000604010 SNAPC4Q5SXM2 1469 aa22.97■■□□□ 1.27
SRGAP2-207ENST00000604010 CUL7Q14999 1698 aa22.97■■□□□ 1.27
SRGAP2-207ENST00000604010 CHD1O14646 1710 aa22.96■■□□□ 1.27
SRGAP2-207ENST00000604010 ADAMTS12P58397 1594 aa22.94■■□□□ 1.26
SRGAP2-207ENST00000604010 EEA1Q15075 1411 aa22.92■■□□□ 1.26
SRGAP2-207ENST00000604010 IGF1RP08069 1367 aa22.92■■□□□ 1.26
SRGAP2-207ENST00000604010 SYNJ2O15056 1496 aa22.88■■□□□ 1.25
SRGAP2-207ENST00000604010 FHAD1B1AJZ9 1412 aa22.87■■□□□ 1.25
SRGAP2-207ENST00000604010 CARMIL1Q5VZK9 1371 aa22.79■■□□□ 1.24
SRGAP2-207ENST00000604010 GRIN2AQ12879 1464 aa22.79■■□□□ 1.24
SRGAP2-207ENST00000604010 CHMP7Q8WUX9 453 aaPredicted RBP22.77■■□□□ 1.24
SRGAP2-207ENST00000604010 CSRNP3Q8WYN3 585 aa22.77■■□□□ 1.24
SRGAP2-207ENST00000604010 PRXQ9BXM0 1461 aa22.75■■□□□ 1.23
SRGAP2-207ENST00000604010 FBLN2P98095 1184 aa22.73■■□□□ 1.23
SRGAP2-207ENST00000604010 RAPGEF2Q9Y4G8 1499 aa22.73■■□□□ 1.23
SRGAP2-207ENST00000604010 KIF21BO75037 1637 aa22.71■■□□□ 1.23
SRGAP2-207ENST00000604010 FAM9AQ8IZU1 332 aaPredicted RBP22.7■■□□□ 1.22
SRGAP2-207ENST00000604010 CEP170Q5SW79 1584 aa22.67■■□□□ 1.22
SRGAP2-207ENST00000604010 NUP160Q12769 1436 aa22.67■■□□□ 1.22
SRGAP2-207ENST00000604010 OSCARQ8IYS5 282 aa22.67■■□□□ 1.22
SRGAP2-207ENST00000604010 CTTNBP2Q8WZ74 1663 aa22.65■■□□□ 1.22
SRGAP2-207ENST00000604010 CLASP1Q7Z460 1538 aa22.64■■□□□ 1.21
SRGAP2-207ENST00000604010 KIAA0586Q9BVV6 1533 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms