RNA–Protein interactions for RNA: ENST00000603492.1

FOCAD-204, Transcript of focadhesin, humanhuman

TSL 4

Gene FOCAD, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-204ENST00000603492 AEBP2Q6ZN18 517 aaPredicted RBP18.97■□□□□ 0.63
FOCAD-204ENST00000603492 CHIC1Q5VXU3 224 aa17.71■□□□□ 0.43
FOCAD-204ENST00000603492 SENP3Q9H4L4 574 aaPredicted RBP16.25■□□□□ 0.19
FOCAD-204ENST00000603492 PHF23Q9BUL5 403 aaPredicted RBP15.99■□□□□ 0.15
FOCAD-204ENST00000603492 NISCHQ9Y2I1 1504 aa15.52■□□□□ 0.07
FOCAD-204ENST00000603492 FOXD1Q16676 465 aa15.22■□□□□ 0.03
FOCAD-204ENST00000603492 POTEDQ86YR6 584 aa14.99□□□□□ -0.01
FOCAD-204ENST00000603492 MSH5O43196 834 aa14.43□□□□□ -0.1
FOCAD-204ENST00000603492 PIAS4Q8N2W9 510 aaPredicted RBP14.1□□□□□ -0.15
FOCAD-204ENST00000603492 PPP6R1Q9UPN7 881 aa13.85□□□□□ -0.19
FOCAD-204ENST00000603492 ADRA2BP18089 450 aa13.78□□□□□ -0.2
FOCAD-204ENST00000603492 PLPPR3Q6T4P5 718 aa13.74□□□□□ -0.21
FOCAD-204ENST00000603492 CCDC180Q9P1Z9 1646 aa13.72□□□□□ -0.21
FOCAD-204ENST00000603492 ABCC9O60706 1549 aa13.49□□□□□ -0.25
FOCAD-204ENST00000603492 DCAF8L2P0C7V8 631 aa13.05□□□□□ -0.32
FOCAD-204ENST00000603492 ZCCHC6Q5VYS8 1495 aaKnown RBP12.91□□□□□ -0.34
FOCAD-204ENST00000603492 RB1CC1Q8TDY2 1594 aa12.91□□□□□ -0.34
FOCAD-204ENST00000603492 NACADO15069 1562 aa12.9□□□□□ -0.34
FOCAD-204ENST00000603492 MAPK8IP2Q13387 824 aaPredicted RBP12.84□□□□□ -0.35
FOCAD-204ENST00000603492 MYO15BQ96JP2 1530 aa12.82□□□□□ -0.36
FOCAD-204ENST00000603492 DMRT2Q9Y5R5 561 aa12.8□□□□□ -0.36
FOCAD-204ENST00000603492 DCAF1Q9Y4B6 1507 aa12.78□□□□□ -0.36
FOCAD-204ENST00000603492 CACNB1Q02641 598 aaPredicted RBP12.74□□□□□ -0.37
FOCAD-204ENST00000603492 UNC13AQ9UPW8 1703 aa12.68□□□□□ -0.38
FOCAD-204ENST00000603492 PABPN1Q86U42 306 aaKnown RBP eCLIP12.66□□□□□ -0.38
FOCAD-204ENST00000603492 SCAF1Q9H7N4 1312 aaKnown RBP12.59□□□□□ -0.39
FOCAD-204ENST00000603492 SCRIBQ14160 1630 aa12.59□□□□□ -0.39
FOCAD-204ENST00000603492 BICRAQ9NZM4 1560 aa12.58□□□□□ -0.4
FOCAD-204ENST00000603492 DNAJC5BQ9UF47 199 aa12.44□□□□□ -0.42
FOCAD-204ENST00000603492 DCAF8L1A6NGE4 600 aa12.37□□□□□ -0.43
FOCAD-204ENST00000603492 SHROOM4Q9ULL8 1493 aa12.37□□□□□ -0.43
FOCAD-204ENST00000603492 RNF39Q9H2S5 420 aa12.27□□□□□ -0.45
FOCAD-204ENST00000603492 EIF4G1Q04637 1599 aaKnown RBP12.22□□□□□ -0.45
FOCAD-204ENST00000603492 CC2D2AQ9P2K1 1620 aa12.19□□□□□ -0.46
FOCAD-204ENST00000603492 CECR2Q9BXF3 1484 aa12.14□□□□□ -0.47
FOCAD-204ENST00000603492 HOXD11P31277 338 aaPredicted RBP12.11□□□□□ -0.47
FOCAD-204ENST00000603492 PPP4R3CPQ6ZMV5 832 aa12.08□□□□□ -0.48
FOCAD-204ENST00000603492 C1QBPQ07021 282 aaKnown RBP12.06□□□□□ -0.48
FOCAD-204ENST00000603492 SMARCA4P51532 1647 aa12.03□□□□□ -0.48
FOCAD-204ENST00000603492 MROH2BQ7Z745 1585 aa12□□□□□ -0.49
FOCAD-204ENST00000603492 BAZ1AQ9NRL2 1556 aaPredicted RBP11.99□□□□□ -0.49
FOCAD-204ENST00000603492 ATAD2BQ9ULI0 1458 aa11.97□□□□□ -0.49
FOCAD-204ENST00000603492 NCAPD3P42695 1498 aa11.94□□□□□ -0.5
FOCAD-204ENST00000603492 SMARCA2P51531 1590 aa11.91□□□□□ -0.5
FOCAD-204ENST00000603492 RNF216Q9NWF9 866 aaPredicted RBP11.89□□□□□ -0.51
FOCAD-204ENST00000603492 PEG3Q9GZU2 1588 aa11.88□□□□□ -0.51
FOCAD-204ENST00000603492 WIZO95785 1651 aa11.87□□□□□ -0.51
FOCAD-204ENST00000603492 CNKSR2Q8WXI2 1034 aa11.87□□□□□ -0.51
FOCAD-204ENST00000603492 RSF1Q96T23 1441 aaPredicted RBP11.86□□□□□ -0.51
FOCAD-204ENST00000603492 HMGXB3Q12766 1538 aa11.85□□□□□ -0.51
FOCAD-204ENST00000603492 BAZ1BQ9UIG0 1483 aaKnown RBP11.84□□□□□ -0.51
FOCAD-204ENST00000603492 NESP48681 1621 aa11.71□□□□□ -0.54
FOCAD-204ENST00000603492 TOP2AP11388 1531 aaKnown RBP11.68□□□□□ -0.54
FOCAD-204ENST00000603492 SUPT5HO00267 1087 aaKnown RBP11.66□□□□□ -0.54
FOCAD-204ENST00000603492 NCBP3Q53F19 620 aaKnown RBP11.65□□□□□ -0.54
FOCAD-204ENST00000603492 POTEHQ6S545 545 aa11.65□□□□□ -0.54
FOCAD-204ENST00000603492 CADPSQ9ULU8 1353 aa11.61□□□□□ -0.55
FOCAD-204ENST00000603492 CCDC88BA6NC98 1476 aa11.61□□□□□ -0.55
FOCAD-204ENST00000603492 LAMC3Q9Y6N6 1575 aa11.59□□□□□ -0.55
FOCAD-204ENST00000603492 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.59□□□□□ -0.554e-6■□□□□ 11.1
FOCAD-204ENST00000603492 ERCC6Q03468 1493 aa11.57□□□□□ -0.56
FOCAD-204ENST00000603492 CFTRP13569 1480 aa11.54□□□□□ -0.56
FOCAD-204ENST00000603492 KIF21AQ7Z4S6 1674 aa11.52□□□□□ -0.56
FOCAD-204ENST00000603492 PDS5BQ9NTI5 1447 aa11.52□□□□□ -0.56
FOCAD-204ENST00000603492 NPM3O75607 178 aaKnown RBP11.5□□□□□ -0.57
FOCAD-204ENST00000603492 FANCD2Q9BXW9 1451 aa11.46□□□□□ -0.57
FOCAD-204ENST00000603492 THOC2Q8NI27 1593 aaKnown RBP11.45□□□□□ -0.58
FOCAD-204ENST00000603492 KCNA4P22459 653 aa11.44□□□□□ -0.58
FOCAD-204ENST00000603492 CEP164Q9UPV0 1460 aa11.42□□□□□ -0.58
FOCAD-204ENST00000603492 PRDM2Q13029 1718 aa11.41□□□□□ -0.58
FOCAD-204ENST00000603492 CUX2O14529 1486 aa11.41□□□□□ -0.58
FOCAD-204ENST00000603492 MRC2Q9UBG0 1479 aa11.4□□□□□ -0.58
FOCAD-204ENST00000603492 URB2Q14146 1524 aaKnown RBP11.37□□□□□ -0.59
FOCAD-204ENST00000603492 WDR62O43379 1518 aa11.36□□□□□ -0.59
FOCAD-204ENST00000603492 DSG3P32926 999 aa11.32□□□□□ -0.6
FOCAD-204ENST00000603492 CAPN15O75808 1086 aa11.3□□□□□ -0.6
FOCAD-204ENST00000603492 TOPBP1Q92547 1522 aa11.3□□□□□ -0.6
FOCAD-204ENST00000603492 SPINK5Q9NQ38 1064 aaPredicted RBP11.28□□□□□ -0.6
FOCAD-204ENST00000603492 U3KPZ7 1027 aaPredicted RBP11.26□□□□□ -0.61
FOCAD-204ENST00000603492 DNMBPQ6XZF7 1577 aa11.25□□□□□ -0.61
FOCAD-204ENST00000603492 CUX1P39880 1505 aa11.24□□□□□ -0.61
FOCAD-204ENST00000603492 ABCC8Q09428 1581 aa11.24□□□□□ -0.61
FOCAD-204ENST00000603492 POLA1P09884 1462 aaPredicted RBP11.2□□□□□ -0.62
FOCAD-204ENST00000603492 ZNF608Q9ULD9 1512 aaPredicted RBP11.19□□□□□ -0.62
FOCAD-204ENST00000603492 RAD54L2Q9Y4B4 1467 aa11.19□□□□□ -0.62
FOCAD-204ENST00000603492 FGD5Q6ZNL6 1462 aa11.18□□□□□ -0.62
FOCAD-204ENST00000603492 IFT140Q96RY7 1462 aa11.18□□□□□ -0.62
FOCAD-204ENST00000603492 SOGA1O94964 1423 aa11.18□□□□□ -0.62
FOCAD-204ENST00000603492 TARBP1Q13395 1621 aaKnown RBP11.17□□□□□ -0.62
FOCAD-204ENST00000603492 WRNQ14191 1432 aaPredicted RBP eCLIP11.16□□□□□ -0.62
FOCAD-204ENST00000603492 AQRO60306 1485 aaKnown RBP eCLIP11.15□□□□□ -0.62
FOCAD-204ENST00000603492 SYNJ1O43426 1573 aa11.15□□□□□ -0.62
FOCAD-204ENST00000603492 TDRD9Q8NDG6 1382 aaKnown RBP11.13□□□□□ -0.63
FOCAD-204ENST00000603492 TOP2BQ02880 1626 aa11.12□□□□□ -0.63
FOCAD-204ENST00000603492 BIVM-ERCC5R4GMW8 1640 aa11.11□□□□□ -0.63
FOCAD-204ENST00000603492 DNAJC5Q9H3Z4 198 aa11.1□□□□□ -0.63
FOCAD-204ENST00000603492 EIF4G3O43432 1585 aaKnown RBP11.09□□□□□ -0.63
FOCAD-204ENST00000603492 WDR97A6NE52 1622 aa11.06□□□□□ -0.64
FOCAD-204ENST00000603492 ABCA10Q8WWZ4 1543 aa11.06□□□□□ -0.64
FOCAD-204ENST00000603492 GAPVD1Q14C86 1478 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms