RNA–Protein interactions for RNA: ENST00000603368.1

AC004840.2-201, humanhuman

BASIC

Gene AC004840.2, Length 285 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004840.2-201ENST00000603368 NISCHQ9Y2I1 1504 aa22.66■■□□□ 1.22
AC004840.2-201ENST00000603368 ABCC9O60706 1549 aa20.43■□□□□ 0.86
AC004840.2-201ENST00000603368 CCDC180Q9P1Z9 1646 aa20.26■□□□□ 0.83
AC004840.2-201ENST00000603368 DCAF8L2P0C7V8 631 aa19.41■□□□□ 0.7
AC004840.2-201ENST00000603368 RB1CC1Q8TDY2 1594 aa19.4■□□□□ 0.7
AC004840.2-201ENST00000603368 NACADO15069 1562 aa19.26■□□□□ 0.67
AC004840.2-201ENST00000603368 DNAJC5BQ9UF47 199 aa19.21■□□□□ 0.67
AC004840.2-201ENST00000603368 PABPN1Q86U42 306 aaKnown RBP eCLIP19.11■□□□□ 0.65
AC004840.2-201ENST00000603368 MYO15BQ96JP2 1530 aa18.95■□□□□ 0.62
AC004840.2-201ENST00000603368 UNC13AQ9UPW8 1703 aa18.79■□□□□ 0.6
AC004840.2-201ENST00000603368 BICRAQ9NZM4 1560 aa18.73■□□□□ 0.59
AC004840.2-201ENST00000603368 ZCCHC6Q5VYS8 1495 aaKnown RBP18.72■□□□□ 0.59
AC004840.2-201ENST00000603368 DCAF1Q9Y4B6 1507 aa18.69■□□□□ 0.58
AC004840.2-201ENST00000603368 SHROOM4Q9ULL8 1493 aa18.56■□□□□ 0.56
AC004840.2-201ENST00000603368 SCRIBQ14160 1630 aa18.52■□□□□ 0.56
AC004840.2-201ENST00000603368 CECR2Q9BXF3 1484 aa18.42■□□□□ 0.54
AC004840.2-201ENST00000603368 CC2D2AQ9P2K1 1620 aa18.39■□□□□ 0.53
AC004840.2-201ENST00000603368 EIF4G1Q04637 1599 aaKnown RBP18.34■□□□□ 0.53
AC004840.2-201ENST00000603368 NCAPD3P42695 1498 aa17.8■□□□□ 0.44
AC004840.2-201ENST00000603368 DNAJC5Q9H3Z4 198 aa17.74■□□□□ 0.43
AC004840.2-201ENST00000603368 ATAD2BQ9ULI0 1458 aa17.73■□□□□ 0.43
AC004840.2-201ENST00000603368 ERCC6Q03468 1493 aa17.71■□□□□ 0.43
AC004840.2-201ENST00000603368 SMARCA2P51531 1590 aa17.68■□□□□ 0.42
AC004840.2-201ENST00000603368 SMARCA4P51532 1647 aa17.64■□□□□ 0.41
AC004840.2-201ENST00000603368 CUX2O14529 1486 aa17.62■□□□□ 0.41
AC004840.2-201ENST00000603368 BAZ1AQ9NRL2 1556 aaPredicted RBP17.61■□□□□ 0.41
AC004840.2-201ENST00000603368 HMGXB3Q12766 1538 aa17.6■□□□□ 0.41
AC004840.2-201ENST00000603368 BAZ1BQ9UIG0 1483 aaKnown RBP17.59■□□□□ 0.41
AC004840.2-201ENST00000603368 NESP48681 1621 aa17.5■□□□□ 0.39
AC004840.2-201ENST00000603368 PEG3Q9GZU2 1588 aa17.45■□□□□ 0.38
AC004840.2-201ENST00000603368 MROH2BQ7Z745 1585 aa17.44■□□□□ 0.38
AC004840.2-201ENST00000603368 PDS5BQ9NTI5 1447 aa17.38■□□□□ 0.37
AC004840.2-201ENST00000603368 LAMC3Q9Y6N6 1575 aa17.37■□□□□ 0.37
AC004840.2-201ENST00000603368 CADPSQ9ULU8 1353 aa17.31■□□□□ 0.36
AC004840.2-201ENST00000603368 THOC2Q8NI27 1593 aaKnown RBP17.23■□□□□ 0.35
AC004840.2-201ENST00000603368 WIZO95785 1651 aa17.2■□□□□ 0.34
AC004840.2-201ENST00000603368 KIF21AQ7Z4S6 1674 aa17.19■□□□□ 0.34
AC004840.2-201ENST00000603368 MRC2Q9UBG0 1479 aa17.15■□□□□ 0.34
AC004840.2-201ENST00000603368 RSF1Q96T23 1441 aaPredicted RBP17.12■□□□□ 0.33
AC004840.2-201ENST00000603368 CEP164Q9UPV0 1460 aa17.1■□□□□ 0.33
AC004840.2-201ENST00000603368 FANCD2Q9BXW9 1451 aa17.07■□□□□ 0.32
AC004840.2-201ENST00000603368 WDR62O43379 1518 aa17.06■□□□□ 0.32
AC004840.2-201ENST00000603368 CFTRP13569 1480 aa17.05■□□□□ 0.32
AC004840.2-201ENST00000603368 TRIM41Q8WV44 630 aa17.01■□□□□ 0.31
AC004840.2-201ENST00000603368 TOP2AP11388 1531 aaKnown RBP17.01■□□□□ 0.31
AC004840.2-201ENST00000603368 OSCARQ8IYS5 282 aa16.96■□□□□ 0.31
AC004840.2-201ENST00000603368 URB2Q14146 1524 aaKnown RBP16.88■□□□□ 0.29
AC004840.2-201ENST00000603368 CCDC88BA6NC98 1476 aa16.86■□□□□ 0.29
AC004840.2-201ENST00000603368 IFT140Q96RY7 1462 aa16.76■□□□□ 0.27
AC004840.2-201ENST00000603368 ABCC8Q09428 1581 aa16.76■□□□□ 0.27
AC004840.2-201ENST00000603368 PRDM2Q13029 1718 aa16.72■□□□□ 0.27
AC004840.2-201ENST00000603368 TOPBP1Q92547 1522 aa16.71■□□□□ 0.27
AC004840.2-201ENST00000603368 ZNF608Q9ULD9 1512 aaPredicted RBP16.7■□□□□ 0.26
AC004840.2-201ENST00000603368 FBLN2P98095 1184 aa16.65■□□□□ 0.26
AC004840.2-201ENST00000603368 DNMBPQ6XZF7 1577 aa16.63■□□□□ 0.25
AC004840.2-201ENST00000603368 AQRO60306 1485 aaKnown RBP eCLIP16.6■□□□□ 0.25
AC004840.2-201ENST00000603368 CYB5RLQ6IPT4 315 aa16.56■□□□□ 0.24
AC004840.2-201ENST00000603368 SOGA1O94964 1423 aa16.55■□□□□ 0.24
AC004840.2-201ENST00000603368 EIF4G3O43432 1585 aaKnown RBP16.55■□□□□ 0.24
AC004840.2-201ENST00000603368 POLA1P09884 1462 aaPredicted RBP16.54■□□□□ 0.24
AC004840.2-201ENST00000603368 RIMBP3CA6NJZ7 1639 aa16.53■□□□□ 0.24
AC004840.2-201ENST00000603368 RIMBP3BA6NNM3 1639 aa16.53■□□□□ 0.24
AC004840.2-201ENST00000603368 RIMBP3Q9UFD9 1639 aa16.53■□□□□ 0.24
AC004840.2-201ENST00000603368 TDRD9Q8NDG6 1382 aaKnown RBP16.52■□□□□ 0.24
AC004840.2-201ENST00000603368 ARHGEF11O15085 1522 aa16.51■□□□□ 0.23
AC004840.2-201ENST00000603368 RAD54L2Q9Y4B4 1467 aa16.5■□□□□ 0.23
AC004840.2-201ENST00000603368 TARBP1Q13395 1621 aaKnown RBP16.5■□□□□ 0.23
AC004840.2-201ENST00000603368 SUPT5HO00267 1087 aaKnown RBP16.5■□□□□ 0.23
AC004840.2-201ENST00000603368 CHMP7Q8WUX9 453 aaPredicted RBP16.5■□□□□ 0.23
AC004840.2-201ENST00000603368 TRHP20396 242 aaPredicted RBP16.45■□□□□ 0.22
AC004840.2-201ENST00000603368 FGD5Q6ZNL6 1462 aa16.44■□□□□ 0.22
AC004840.2-201ENST00000603368 CHD1O14646 1710 aa16.4■□□□□ 0.22
AC004840.2-201ENST00000603368 SNAPC4Q5SXM2 1469 aa16.39■□□□□ 0.21
AC004840.2-201ENST00000603368 CUX1P39880 1505 aa16.39■□□□□ 0.21
AC004840.2-201ENST00000603368 GRIN2BQ13224 1484 aa16.37■□□□□ 0.21
AC004840.2-201ENST00000603368 WDR97A6NE52 1622 aa16.37■□□□□ 0.21
AC004840.2-201ENST00000603368 MAGI1Q96QZ7 1491 aaPredicted RBP16.35■□□□□ 0.21
AC004840.2-201ENST00000603368 ARAP1Q96P48 1450 aa16.33■□□□□ 0.2
AC004840.2-201ENST00000603368 SYNJ1O43426 1573 aa16.31■□□□□ 0.2
AC004840.2-201ENST00000603368 SYNJ2O15056 1496 aa16.31■□□□□ 0.2
AC004840.2-201ENST00000603368 GAPVD1Q14C86 1478 aa16.31■□□□□ 0.2
AC004840.2-201ENST00000603368 WRNQ14191 1432 aaPredicted RBP eCLIP16.27■□□□□ 0.19
AC004840.2-201ENST00000603368 CLASP1Q7Z460 1538 aa16.24■□□□□ 0.19
AC004840.2-201ENST00000603368 ABCA10Q8WWZ4 1543 aa16.24■□□□□ 0.19
AC004840.2-201ENST00000603368 PBRM1Q86U86 1689 aa16.18■□□□□ 0.18
AC004840.2-201ENST00000603368 ABCA5Q8WWZ7 1642 aa16.15■□□□□ 0.18
AC004840.2-201ENST00000603368 GRIN2AQ12879 1464 aa16.13■□□□□ 0.17
AC004840.2-201ENST00000603368 FHAD1B1AJZ9 1412 aa16.11■□□□□ 0.17
AC004840.2-201ENST00000603368 TOP2BQ02880 1626 aa16.11■□□□□ 0.17
AC004840.2-201ENST00000603368 BIVM-ERCC5R4GMW8 1640 aa16.06■□□□□ 0.16
AC004840.2-201ENST00000603368 NUP160Q12769 1436 aa16.06■□□□□ 0.16
AC004840.2-201ENST00000603368 ADAMTS12P58397 1594 aa16.04■□□□□ 0.16
AC004840.2-201ENST00000603368 ERICH3Q5RHP9 1530 aa16.04■□□□□ 0.16
AC004840.2-201ENST00000603368 JPH4Q96JJ6 628 aa16.04■□□□□ 0.16
AC004840.2-201ENST00000603368 AEBP2Q6ZN18 517 aaPredicted RBP16.03■□□□□ 0.16
AC004840.2-201ENST00000603368 CEP170Q5SW79 1584 aa16.01■□□□□ 0.15
AC004840.2-201ENST00000603368 NPM1P06748 294 aaKnown RBP eCLIP16■□□□□ 0.15
AC004840.2-201ENST00000603368 PRG4Q92954 1404 aaPredicted RBP15.99■□□□□ 0.15
AC004840.2-201ENST00000603368 ERCC6L2Q5T890 1561 aa15.99■□□□□ 0.15
AC004840.2-201ENST00000603368 SHROOM2Q13796 1616 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms