RNA–Protein interactions for RNA: ENST00000602911.5

PSMD8-209, Transcript of proteasome 26S subunit, non-ATPase 8, humanhuman

TSL 1 (best) BASIC

Gene PSMD8, Length 1,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD8-209ENST00000602911 NISCHQ9Y2I1 1504 aa36.77■■■■□ 3.48
PSMD8-209ENST00000602911 CCDC180Q9P1Z9 1646 aa32.93■■■□□ 2.86
PSMD8-209ENST00000602911 ABCC9O60706 1549 aa32.7■■■□□ 2.83
PSMD8-209ENST00000602911 RB1CC1Q8TDY2 1594 aa31.31■■■□□ 2.6
PSMD8-209ENST00000602911 NACADO15069 1562 aa31.16■■■□□ 2.58
PSMD8-209ENST00000602911 DCAF8L2P0C7V8 631 aa31.06■■■□□ 2.56
PSMD8-209ENST00000602911 MYO15BQ96JP2 1530 aa30.82■■■□□ 2.52
PSMD8-209ENST00000602911 PABPN1Q86U42 306 aaKnown RBP eCLIP30.49■■■□□ 2.47
PSMD8-209ENST00000602911 ZCCHC6Q5VYS8 1495 aaKnown RBP30.49■■■□□ 2.47
PSMD8-209ENST00000602911 DCAF1Q9Y4B6 1507 aa30.46■■■□□ 2.47
PSMD8-209ENST00000602911 DNAJC5BQ9UF47 199 aa30.44■■■□□ 2.46
PSMD8-209ENST00000602911 UNC13AQ9UPW8 1703 aa30.37■■■□□ 2.45
PSMD8-209ENST00000602911 BICRAQ9NZM4 1560 aa30.22■■■□□ 2.43
PSMD8-209ENST00000602911 SHROOM4Q9ULL8 1493 aa30.1■■■□□ 2.41
PSMD8-209ENST00000602911 SCRIBQ14160 1630 aa29.94■■■□□ 2.38
PSMD8-209ENST00000602911 EIF4G1Q04637 1599 aaKnown RBP29.55■■■□□ 2.32
PSMD8-209ENST00000602911 CC2D2AQ9P2K1 1620 aa29.54■■■□□ 2.32
PSMD8-209ENST00000602911 CECR2Q9BXF3 1484 aa29.51■■■□□ 2.31
PSMD8-209ENST00000602911 NCAPD3P42695 1498 aa28.75■■■□□ 2.19
PSMD8-209ENST00000602911 SMARCA2P51531 1590 aa28.65■■■□□ 2.18
PSMD8-209ENST00000602911 ATAD2BQ9ULI0 1458 aa28.63■■■□□ 2.17
PSMD8-209ENST00000602911 SMARCA4P51532 1647 aa28.61■■■□□ 2.17
PSMD8-209ENST00000602911 BAZ1AQ9NRL2 1556 aaPredicted RBP28.59■■■□□ 2.17
PSMD8-209ENST00000602911 HMGXB3Q12766 1538 aa28.54■■■□□ 2.16
PSMD8-209ENST00000602911 BAZ1BQ9UIG0 1483 aaKnown RBP28.41■■■□□ 2.14
PSMD8-209ENST00000602911 PEG3Q9GZU2 1588 aa28.37■■■□□ 2.13
PSMD8-209ENST00000602911 ERCC6Q03468 1493 aa28.36■■■□□ 2.13
PSMD8-209ENST00000602911 MROH2BQ7Z745 1585 aa28.26■■■□□ 2.11
PSMD8-209ENST00000602911 CUX2O14529 1486 aa28.25■■■□□ 2.11
PSMD8-209ENST00000602911 NESP48681 1621 aa28.09■■■□□ 2.09
PSMD8-209ENST00000602911 LAMC3Q9Y6N6 1575 aa28.07■■■□□ 2.08
PSMD8-209ENST00000602911 DNAJC5Q9H3Z4 198 aa28.01■■■□□ 2.07
PSMD8-209ENST00000602911 PDS5BQ9NTI5 1447 aa27.99■■■□□ 2.07
PSMD8-209ENST00000602911 CADPSQ9ULU8 1353 aa27.9■■■□□ 2.06
PSMD8-209ENST00000602911 WIZO95785 1651 aa27.9■■■□□ 2.06
PSMD8-209ENST00000602911 RSF1Q96T23 1441 aaPredicted RBP27.8■■■□□ 2.04
PSMD8-209ENST00000602911 THOC2Q8NI27 1593 aaKnown RBP27.78■■■□□ 2.04
PSMD8-209ENST00000602911 KIF21AQ7Z4S6 1674 aa27.72■■■□□ 2.03
PSMD8-209ENST00000602911 TOP2AP11388 1531 aaKnown RBP27.67■■■□□ 2.02
PSMD8-209ENST00000602911 MRC2Q9UBG0 1479 aa27.64■■■□□ 2.02
PSMD8-209ENST00000602911 CFTRP13569 1480 aa27.58■■■□□ 2.01
PSMD8-209ENST00000602911 CEP164Q9UPV0 1460 aa27.58■■■□□ 2.01
PSMD8-209ENST00000602911 FANCD2Q9BXW9 1451 aa27.54■■■□□ 2
PSMD8-209ENST00000602911 WDR62O43379 1518 aa27.52■■■□□ 2
PSMD8-209ENST00000602911 CCDC88BA6NC98 1476 aa27.33■■□□□ 1.97
PSMD8-209ENST00000602911 PRDM2Q13029 1718 aa27.24■■□□□ 1.95
PSMD8-209ENST00000602911 URB2Q14146 1524 aaKnown RBP27.22■■□□□ 1.95
PSMD8-209ENST00000602911 ABCC8Q09428 1581 aa27.13■■□□□ 1.93
PSMD8-209ENST00000602911 OSCARQ8IYS5 282 aa27.06■■□□□ 1.92
PSMD8-209ENST00000602911 IFT140Q96RY7 1462 aa27.05■■□□□ 1.92
PSMD8-209ENST00000602911 TOPBP1Q92547 1522 aa27.01■■□□□ 1.91
PSMD8-209ENST00000602911 DNMBPQ6XZF7 1577 aa26.94■■□□□ 1.9
PSMD8-209ENST00000602911 ZNF608Q9ULD9 1512 aaPredicted RBP26.83■■□□□ 1.89
PSMD8-209ENST00000602911 TRIM41Q8WV44 630 aa26.83■■□□□ 1.89
PSMD8-209ENST00000602911 SUPT5HO00267 1087 aaKnown RBP26.77■■□□□ 1.88
PSMD8-209ENST00000602911 POLA1P09884 1462 aaPredicted RBP26.74■■□□□ 1.87
PSMD8-209ENST00000602911 EIF4G3O43432 1585 aaKnown RBP26.72■■□□□ 1.87
PSMD8-209ENST00000602911 SOGA1O94964 1423 aa26.7■■□□□ 1.86
PSMD8-209ENST00000602911 TARBP1Q13395 1621 aaKnown RBP26.7■■□□□ 1.86
PSMD8-209ENST00000602911 AQRO60306 1485 aaKnown RBP eCLIP26.68■■□□□ 1.869e-9■■■■■ 35.9
PSMD8-209ENST00000602911 WDR97A6NE52 1622 aa26.61■■□□□ 1.85
PSMD8-209ENST00000602911 FGD5Q6ZNL6 1462 aa26.59■■□□□ 1.85
PSMD8-209ENST00000602911 RAD54L2Q9Y4B4 1467 aa26.59■■□□□ 1.85
PSMD8-209ENST00000602911 FBLN2P98095 1184 aa26.59■■□□□ 1.85
PSMD8-209ENST00000602911 TDRD9Q8NDG6 1382 aaKnown RBP26.56■■□□□ 1.84
PSMD8-209ENST00000602911 CUX1P39880 1505 aa26.55■■□□□ 1.84
PSMD8-209ENST00000602911 RIMBP3CA6NJZ7 1639 aa26.47■■□□□ 1.83
PSMD8-209ENST00000602911 RIMBP3BA6NNM3 1639 aa26.47■■□□□ 1.83
PSMD8-209ENST00000602911 RIMBP3Q9UFD9 1639 aa26.47■■□□□ 1.83
PSMD8-209ENST00000602911 CHMP7Q8WUX9 453 aaPredicted RBP26.46■■□□□ 1.83
PSMD8-209ENST00000602911 ARHGEF11O15085 1522 aa26.45■■□□□ 1.83
PSMD8-209ENST00000602911 CHD1O14646 1710 aa26.45■■□□□ 1.82
PSMD8-209ENST00000602911 GRIN2BQ13224 1484 aa26.45■■□□□ 1.82
PSMD8-209ENST00000602911 MAGI1Q96QZ7 1491 aaPredicted RBP26.44■■□□□ 1.82
PSMD8-209ENST00000602911 SNAPC4Q5SXM2 1469 aa26.41■■□□□ 1.82
PSMD8-209ENST00000602911 WRNQ14191 1432 aaPredicted RBP eCLIP26.36■■□□□ 1.81
PSMD8-209ENST00000602911 GAPVD1Q14C86 1478 aa26.36■■□□□ 1.81
PSMD8-209ENST00000602911 ABCA10Q8WWZ4 1543 aa26.35■■□□□ 1.81
PSMD8-209ENST00000602911 SYNJ2O15056 1496 aa26.33■■□□□ 1.81
PSMD8-209ENST00000602911 CYB5RLQ6IPT4 315 aa26.33■■□□□ 1.81
PSMD8-209ENST00000602911 SYNJ1O43426 1573 aa26.31■■□□□ 1.8
PSMD8-209ENST00000602911 TOP2BQ02880 1626 aa26.24■■□□□ 1.79
PSMD8-209ENST00000602911 PBRM1Q86U86 1689 aa26.22■■□□□ 1.79
PSMD8-209ENST00000602911 ABCA5Q8WWZ7 1642 aa26.21■■□□□ 1.79
PSMD8-209ENST00000602911 BIVM-ERCC5R4GMW8 1640 aa26.2■■□□□ 1.78
PSMD8-209ENST00000602911 CLASP1Q7Z460 1538 aa26.2■■□□□ 1.78
PSMD8-209ENST00000602911 ARAP1Q96P48 1450 aa26.17■■□□□ 1.78
PSMD8-209ENST00000602911 GRIN2AQ12879 1464 aa26.07■■□□□ 1.76
PSMD8-209ENST00000602911 FHAD1B1AJZ9 1412 aa26.06■■□□□ 1.76
PSMD8-209ENST00000602911 ERICH3Q5RHP9 1530 aa26.05■■□□□ 1.76
PSMD8-209ENST00000602911 TRHP20396 242 aaPredicted RBP26.04■■□□□ 1.76
PSMD8-209ENST00000602911 ADAMTS12P58397 1594 aa26.01■■□□□ 1.75
PSMD8-209ENST00000602911 NUP160Q12769 1436 aa25.97■■□□□ 1.75
PSMD8-209ENST00000602911 CEP170Q5SW79 1584 aa25.87■■□□□ 1.73
PSMD8-209ENST00000602911 KIF27Q86VH2 1401 aa25.85■■□□□ 1.73
PSMD8-209ENST00000602911 JPH4Q96JJ6 628 aa25.78■■□□□ 1.72
PSMD8-209ENST00000602911 SHROOM2Q13796 1616 aa25.78■■□□□ 1.72
PSMD8-209ENST00000602911 PRG4Q92954 1404 aaPredicted RBP25.73■■□□□ 1.71
PSMD8-209ENST00000602911 IGF1RP08069 1367 aa25.73■■□□□ 1.71
PSMD8-209ENST00000602911 ERCC6L2Q5T890 1561 aa25.7■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms