RNA–Protein interactions for RNA: ENST00000602550.5

HCG18-245, Transcript of HLA complex group 18, humanhuman

TSL 4 BASIC

Gene HCG18, Length 559 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-245ENST00000602550 NISCHQ9Y2I1 1504 aa36.13■■■■□ 3.38
HCG18-245ENST00000602550 ABCC9O60706 1549 aa33.07■■■□□ 2.88
HCG18-245ENST00000602550 CCDC180Q9P1Z9 1646 aa32.63■■■□□ 2.81
HCG18-245ENST00000602550 DNAJC5BQ9UF47 199 aa31.43■■■□□ 2.62
HCG18-245ENST00000602550 RB1CC1Q8TDY2 1594 aa31.31■■■□□ 2.6
HCG18-245ENST00000602550 NACADO15069 1562 aa30.99■■■□□ 2.55
HCG18-245ENST00000602550 DCAF8L2P0C7V8 631 aa30.77■■■□□ 2.52
HCG18-245ENST00000602550 PABPN1Q86U42 306 aaKnown RBP eCLIP30.73■■■□□ 2.51
HCG18-245ENST00000602550 UNC13AQ9UPW8 1703 aa30.54■■■□□ 2.48
HCG18-245ENST00000602550 MYO15BQ96JP2 1530 aa30.42■■■□□ 2.46
HCG18-245ENST00000602550 BICRAQ9NZM4 1560 aa30.35■■■□□ 2.45
HCG18-245ENST00000602550 SHROOM4Q9ULL8 1493 aa29.98■■■□□ 2.39
HCG18-245ENST00000602550 CECR2Q9BXF3 1484 aa29.86■■■□□ 2.37
HCG18-245ENST00000602550 DCAF1Q9Y4B6 1507 aa29.86■■■□□ 2.37
HCG18-245ENST00000602550 CC2D2AQ9P2K1 1620 aa29.85■■■□□ 2.37
HCG18-245ENST00000602550 ZCCHC6Q5VYS8 1495 aaKnown RBP29.82■■■□□ 2.36
HCG18-245ENST00000602550 EIF4G1Q04637 1599 aaKnown RBP29.67■■■□□ 2.34
HCG18-245ENST00000602550 SCRIBQ14160 1630 aa29.66■■■□□ 2.34
HCG18-245ENST00000602550 DNAJC5Q9H3Z4 198 aa29.28■■■□□ 2.28
HCG18-245ENST00000602550 CUX2O14529 1486 aa28.73■■■□□ 2.19
HCG18-245ENST00000602550 NCAPD3P42695 1498 aa28.62■■■□□ 2.17
HCG18-245ENST00000602550 ERCC6Q03468 1493 aa28.62■■■□□ 2.17
HCG18-245ENST00000602550 ATAD2BQ9ULI0 1458 aa28.44■■■□□ 2.14
HCG18-245ENST00000602550 SMARCA2P51531 1590 aa28.36■■■□□ 2.13
HCG18-245ENST00000602550 HMGXB3Q12766 1538 aa28.33■■■□□ 2.13
HCG18-245ENST00000602550 SMARCA4P51532 1647 aa28.27■■■□□ 2.12
HCG18-245ENST00000602550 NESP48681 1621 aa28.25■■■□□ 2.11
HCG18-245ENST00000602550 BAZ1BQ9UIG0 1483 aaKnown RBP28.15■■■□□ 2.1
HCG18-245ENST00000602550 BAZ1AQ9NRL2 1556 aaPredicted RBP28.11■■■□□ 2.09
HCG18-245ENST00000602550 THOC2Q8NI27 1593 aaKnown RBP28.05■■■□□ 2.08
HCG18-245ENST00000602550 LAMC3Q9Y6N6 1575 aa28.04■■■□□ 2.08
HCG18-245ENST00000602550 PEG3Q9GZU2 1588 aa28.02■■■□□ 2.08
HCG18-245ENST00000602550 PDS5BQ9NTI5 1447 aa27.93■■■□□ 2.06
HCG18-245ENST00000602550 KIF21AQ7Z4S6 1674 aa27.87■■■□□ 2.05
HCG18-245ENST00000602550 MROH2BQ7Z745 1585 aa27.81■■■□□ 2.04
HCG18-245ENST00000602550 TRIM41Q8WV44 630 aa27.77■■■□□ 2.04
HCG18-245ENST00000602550 CADPSQ9ULU8 1353 aa27.73■■■□□ 2.03
HCG18-245ENST00000602550 MRC2Q9UBG0 1479 aa27.67■■■□□ 2.02
HCG18-245ENST00000602550 WDR62O43379 1518 aa27.59■■■□□ 2.01
HCG18-245ENST00000602550 CEP164Q9UPV0 1460 aa27.47■■□□□ 1.99
HCG18-245ENST00000602550 WIZO95785 1651 aa27.46■■□□□ 1.99
HCG18-245ENST00000602550 OSCARQ8IYS5 282 aa27.41■■□□□ 1.98
HCG18-245ENST00000602550 FANCD2Q9BXW9 1451 aa27.39■■□□□ 1.98
HCG18-245ENST00000602550 CFTRP13569 1480 aa27.3■■□□□ 1.96
HCG18-245ENST00000602550 URB2Q14146 1524 aaKnown RBP27.16■■□□□ 1.94
HCG18-245ENST00000602550 RSF1Q96T23 1441 aaPredicted RBP27.09■■□□□ 1.93
HCG18-245ENST00000602550 TOP2AP11388 1531 aaKnown RBP27.09■■□□□ 1.93
HCG18-245ENST00000602550 RIMBP3CA6NJZ7 1639 aa26.99■■□□□ 1.91
HCG18-245ENST00000602550 RIMBP3BA6NNM3 1639 aa26.99■■□□□ 1.91
HCG18-245ENST00000602550 RIMBP3Q9UFD9 1639 aa26.99■■□□□ 1.91
HCG18-245ENST00000602550 PRDM2Q13029 1718 aa26.97■■□□□ 1.91
HCG18-245ENST00000602550 IFT140Q96RY7 1462 aa26.95■■□□□ 1.91
HCG18-245ENST00000602550 ZNF608Q9ULD9 1512 aaPredicted RBP26.9■■□□□ 1.9
HCG18-245ENST00000602550 ARHGEF11O15085 1522 aa26.87■■□□□ 1.89
HCG18-245ENST00000602550 TOPBP1Q92547 1522 aa26.81■■□□□ 1.88
HCG18-245ENST00000602550 CCDC88BA6NC98 1476 aa26.81■■□□□ 1.88
HCG18-245ENST00000602550 ABCC8Q09428 1581 aa26.8■■□□□ 1.88
HCG18-245ENST00000602550 CYB5RLQ6IPT4 315 aa26.76■■□□□ 1.87
HCG18-245ENST00000602550 EIF4G3O43432 1585 aaKnown RBP26.72■■□□□ 1.87
HCG18-245ENST00000602550 DNMBPQ6XZF7 1577 aa26.67■■□□□ 1.86
HCG18-245ENST00000602550 TRHP20396 242 aaPredicted RBP26.64■■□□□ 1.86
HCG18-245ENST00000602550 AQRO60306 1485 aaKnown RBP eCLIP26.62■■□□□ 1.85
HCG18-245ENST00000602550 CHD1O14646 1710 aa26.62■■□□□ 1.85
HCG18-245ENST00000602550 FBLN2P98095 1184 aa26.6■■□□□ 1.85
HCG18-245ENST00000602550 TARBP1Q13395 1621 aaKnown RBP26.59■■□□□ 1.85
HCG18-245ENST00000602550 ARAP1Q96P48 1450 aa26.56■■□□□ 1.84
HCG18-245ENST00000602550 POLA1P09884 1462 aaPredicted RBP26.5■■□□□ 1.83
HCG18-245ENST00000602550 SOGA1O94964 1423 aa26.42■■□□□ 1.82
HCG18-245ENST00000602550 TDRD9Q8NDG6 1382 aaKnown RBP26.41■■□□□ 1.82
HCG18-245ENST00000602550 RAD54L2Q9Y4B4 1467 aa26.41■■□□□ 1.82
HCG18-245ENST00000602550 CHMP7Q8WUX9 453 aaPredicted RBP26.35■■□□□ 1.81
HCG18-245ENST00000602550 WDR97A6NE52 1622 aa26.35■■□□□ 1.81
HCG18-245ENST00000602550 SNAPC4Q5SXM2 1469 aa26.32■■□□□ 1.8
HCG18-245ENST00000602550 CLASP1Q7Z460 1538 aa26.3■■□□□ 1.8
HCG18-245ENST00000602550 SYNJ1O43426 1573 aa26.29■■□□□ 1.8
HCG18-245ENST00000602550 MAGI1Q96QZ7 1491 aaPredicted RBP26.28■■□□□ 1.8
HCG18-245ENST00000602550 FGD5Q6ZNL6 1462 aa26.27■■□□□ 1.8
HCG18-245ENST00000602550 GRIN2BQ13224 1484 aa26.23■■□□□ 1.79
HCG18-245ENST00000602550 AEBP2Q6ZN18 517 aaPredicted RBP26.23■■□□□ 1.79
HCG18-245ENST00000602550 SYNJ2O15056 1496 aa26.19■■□□□ 1.78
HCG18-245ENST00000602550 CUX1P39880 1505 aa26.15■■□□□ 1.78
HCG18-245ENST00000602550 GAPVD1Q14C86 1478 aa26.1■■□□□ 1.77
HCG18-245ENST00000602550 PBRM1Q86U86 1689 aa26.05■■□□□ 1.76
HCG18-245ENST00000602550 ABCA10Q8WWZ4 1543 aa25.97■■□□□ 1.75
HCG18-245ENST00000602550 ABCA5Q8WWZ7 1642 aa25.92■■□□□ 1.74
HCG18-245ENST00000602550 GRIN2AQ12879 1464 aa25.87■■□□□ 1.73
HCG18-245ENST00000602550 ERCC6L2Q5T890 1561 aa25.82■■□□□ 1.72
HCG18-245ENST00000602550 NUP160Q12769 1436 aa25.8■■□□□ 1.72
HCG18-245ENST00000602550 WRNQ14191 1432 aaPredicted RBP eCLIP25.8■■□□□ 1.72
HCG18-245ENST00000602550 CEP170Q5SW79 1584 aa25.8■■□□□ 1.72
HCG18-245ENST00000602550 ADAMTS12P58397 1594 aa25.77■■□□□ 1.72
HCG18-245ENST00000602550 FHAD1B1AJZ9 1412 aa25.74■■□□□ 1.71
HCG18-245ENST00000602550 SHROOM2Q13796 1616 aa25.73■■□□□ 1.71
HCG18-245ENST00000602550 ERICH3Q5RHP9 1530 aa25.64■■□□□ 1.7
HCG18-245ENST00000602550 KIF13AQ9H1H9 1805 aa25.64■■□□□ 1.7
HCG18-245ENST00000602550 TOP2BQ02880 1626 aa25.63■■□□□ 1.69
HCG18-245ENST00000602550 BIVM-ERCC5R4GMW8 1640 aa25.63■■□□□ 1.69
HCG18-245ENST00000602550 JPH4Q96JJ6 628 aa25.61■■□□□ 1.69
HCG18-245ENST00000602550 PRG4Q92954 1404 aaPredicted RBP25.61■■□□□ 1.69
HCG18-245ENST00000602550 SUPT5HO00267 1087 aaKnown RBP25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms