RNA–Protein interactions for RNA: ENST00000602499.5

UBE2E3-207, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 2

Gene UBE2E3, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-207ENST00000602499 NISCHQ9Y2I1 1504 aa52.62■■■■■ 6.01
UBE2E3-207ENST00000602499 CCDC180Q9P1Z9 1646 aa46.61■■■■■ 5.05
UBE2E3-207ENST00000602499 ABCC9O60706 1549 aa45.11■■■■■ 4.81
UBE2E3-207ENST00000602499 ZCCHC6Q5VYS8 1495 aaKnown RBP43.92■■■■■ 4.62
UBE2E3-207ENST00000602499 NACADO15069 1562 aa43.75■■■■■ 4.59
UBE2E3-207ENST00000602499 MYO15BQ96JP2 1530 aa43.7■■■■■ 4.59
UBE2E3-207ENST00000602499 DCAF8L2P0C7V8 631 aa43.7■■■■■ 4.59
UBE2E3-207ENST00000602499 RB1CC1Q8TDY2 1594 aa43.66■■■■■ 4.58
UBE2E3-207ENST00000602499 DCAF1Q9Y4B6 1507 aa43.64■■■■■ 4.58
UBE2E3-207ENST00000602499 UNC13AQ9UPW8 1703 aa42.62■■■■■ 4.41
UBE2E3-207ENST00000602499 DNAJC5BQ9UF47 199 aa42.59■■■■■ 4.41
UBE2E3-207ENST00000602499 SCRIBQ14160 1630 aa42.46■■■■■ 4.39
UBE2E3-207ENST00000602499 BICRAQ9NZM4 1560 aa42.3■■■■■ 4.36
UBE2E3-207ENST00000602499 PABPN1Q86U42 306 aaKnown RBP eCLIP42.23■■■■■ 4.35
UBE2E3-207ENST00000602499 SHROOM4Q9ULL8 1493 aa42.01■■■■■ 4.32
UBE2E3-207ENST00000602499 EIF4G1Q04637 1599 aaKnown RBP41.16■■■■■ 4.18
UBE2E3-207ENST00000602499 CECR2Q9BXF3 1484 aa40.89■■■■■ 4.14
UBE2E3-207ENST00000602499 CC2D2AQ9P2K1 1620 aa40.86■■■■■ 4.13
UBE2E3-207ENST00000602499 BAZ1AQ9NRL2 1556 aaPredicted RBP40.77■■■■■ 4.12
UBE2E3-207ENST00000602499 SMARCA4P51532 1647 aa40.71■■■■■ 4.11
UBE2E3-207ENST00000602499 MROH2BQ7Z745 1585 aa40.52■■■■■ 4.08
UBE2E3-207ENST00000602499 ATAD2BQ9ULI0 1458 aa40.41■■■■■ 4.06
UBE2E3-207ENST00000602499 SMARCA2P51531 1590 aa40.4■■■■■ 4.06
UBE2E3-207ENST00000602499 PEG3Q9GZU2 1588 aa40.39■■■■■ 4.06
UBE2E3-207ENST00000602499 NCAPD3P42695 1498 aa40.38■■■■■ 4.05
UBE2E3-207ENST00000602499 RSF1Q96T23 1441 aaPredicted RBP40.24■■■■■ 4.03
UBE2E3-207ENST00000602499 HMGXB3Q12766 1538 aa40.19■■■■■ 4.02
UBE2E3-207ENST00000602499 WIZO95785 1651 aa40.08■■■■■ 4.01
UBE2E3-207ENST00000602499 BAZ1BQ9UIG0 1483 aaKnown RBP40.08■■■■■ 4.01
UBE2E3-207ENST00000602499 TOP2AP11388 1531 aaKnown RBP39.73■■■■□ 3.95
UBE2E3-207ENST00000602499 SUPT5HO00267 1087 aaKnown RBP39.45■■■■□ 3.91
UBE2E3-207ENST00000602499 DNAJC5Q9H3Z4 198 aa39.29■■■■□ 3.88
UBE2E3-207ENST00000602499 CCDC88BA6NC98 1476 aa39.26■■■■□ 3.88
UBE2E3-207ENST00000602499 LAMC3Q9Y6N6 1575 aa39.21■■■■□ 3.87
UBE2E3-207ENST00000602499 CADPSQ9ULU8 1353 aa39.21■■■■□ 3.87
UBE2E3-207ENST00000602499 NESP48681 1621 aa39.15■■■■□ 3.86
UBE2E3-207ENST00000602499 CFTRP13569 1480 aa39.05■■■■□ 3.84
UBE2E3-207ENST00000602499 PDS5BQ9NTI5 1447 aa38.96■■■■□ 3.83
UBE2E3-207ENST00000602499 ERCC6Q03468 1493 aa38.87■■■■□ 3.81
UBE2E3-207ENST00000602499 CUX2O14529 1486 aa38.81■■■■□ 3.8
UBE2E3-207ENST00000602499 PRDM2Q13029 1718 aa38.76■■■■□ 3.8
UBE2E3-207ENST00000602499 FANCD2Q9BXW9 1451 aa38.71■■■■□ 3.79
UBE2E3-207ENST00000602499 KIF21AQ7Z4S6 1674 aa38.71■■■■□ 3.79
UBE2E3-207ENST00000602499 CEP164Q9UPV0 1460 aa38.62■■■■□ 3.77
UBE2E3-207ENST00000602499 THOC2Q8NI27 1593 aaKnown RBP38.51■■■■□ 3.76
UBE2E3-207ENST00000602499 MRC2Q9UBG0 1479 aa38.48■■■■□ 3.75
UBE2E3-207ENST00000602499 WDR62O43379 1518 aa38.35■■■■□ 3.73
UBE2E3-207ENST00000602499 URB2Q14146 1524 aaKnown RBP38.28■■■■□ 3.72
UBE2E3-207ENST00000602499 ABCC8Q09428 1581 aa38.24■■■■□ 3.71
UBE2E3-207ENST00000602499 DNMBPQ6XZF7 1577 aa38.14■■■■□ 3.7
UBE2E3-207ENST00000602499 TOPBP1Q92547 1522 aa38.13■■■■□ 3.69
UBE2E3-207ENST00000602499 CUX1P39880 1505 aa37.98■■■■□ 3.67
UBE2E3-207ENST00000602499 WRNQ14191 1432 aaPredicted RBP eCLIP37.92■■■■□ 3.66
UBE2E3-207ENST00000602499 POLA1P09884 1462 aaPredicted RBP37.84■■■■□ 3.65
UBE2E3-207ENST00000602499 IFT140Q96RY7 1462 aa37.83■■■■□ 3.65
UBE2E3-207ENST00000602499 TOP2BQ02880 1626 aa37.81■■■■□ 3.64
UBE2E3-207ENST00000602499 FGD5Q6ZNL6 1462 aa37.79■■■■□ 3.64
UBE2E3-207ENST00000602499 BIVM-ERCC5R4GMW8 1640 aa37.79■■■■□ 3.64
UBE2E3-207ENST00000602499 SYNJ1O43426 1573 aa37.76■■■■□ 3.64
UBE2E3-207ENST00000602499 SOGA1O94964 1423 aa37.71■■■■□ 3.63
UBE2E3-207ENST00000602499 TARBP1Q13395 1621 aaKnown RBP37.69■■■■□ 3.62
UBE2E3-207ENST00000602499 RAD54L2Q9Y4B4 1467 aa37.63■■■■□ 3.61
UBE2E3-207ENST00000602499 ZNF608Q9ULD9 1512 aaPredicted RBP37.55■■■■□ 3.6
UBE2E3-207ENST00000602499 WDR97A6NE52 1622 aa37.5■■■■□ 3.59
UBE2E3-207ENST00000602499 ABCA10Q8WWZ4 1543 aa37.5■■■■□ 3.59
UBE2E3-207ENST00000602499 EIF4G3O43432 1585 aaKnown RBP37.42■■■■□ 3.58
UBE2E3-207ENST00000602499 TDRD9Q8NDG6 1382 aaKnown RBP37.41■■■■□ 3.58
UBE2E3-207ENST00000602499 AQRO60306 1485 aaKnown RBP eCLIP37.4■■■■□ 3.58
UBE2E3-207ENST00000602499 TRIM41Q8WV44 630 aa37.33■■■■□ 3.57
UBE2E3-207ENST00000602499 ABCA5Q8WWZ7 1642 aa37.28■■■■□ 3.56
UBE2E3-207ENST00000602499 GAPVD1Q14C86 1478 aa37.27■■■■□ 3.56
UBE2E3-207ENST00000602499 GRIN2BQ13224 1484 aa37.23■■■■□ 3.55
UBE2E3-207ENST00000602499 CHIC1Q5VXU3 224 aa37.13■■■■□ 3.53
UBE2E3-207ENST00000602499 PBRM1Q86U86 1689 aa37.12■■■■□ 3.53
UBE2E3-207ENST00000602499 KIF27Q86VH2 1401 aa37.12■■■■□ 3.53
UBE2E3-207ENST00000602499 MAGI1Q96QZ7 1491 aaPredicted RBP37.1■■■■□ 3.53
UBE2E3-207ENST00000602499 ERICH3Q5RHP9 1530 aa37.07■■■■□ 3.53
UBE2E3-207ENST00000602499 SNAPC4Q5SXM2 1469 aa37.07■■■■□ 3.52
UBE2E3-207ENST00000602499 SYNJ2O15056 1496 aa36.94■■■■□ 3.5
UBE2E3-207ENST00000602499 IGF1RP08069 1367 aa36.93■■■■□ 3.5
UBE2E3-207ENST00000602499 FHAD1B1AJZ9 1412 aa36.88■■■■□ 3.49
UBE2E3-207ENST00000602499 OSCARQ8IYS5 282 aa36.88■■■■□ 3.49
UBE2E3-207ENST00000602499 CHMP7Q8WUX9 453 aaPredicted RBP36.88■■■■□ 3.49
UBE2E3-207ENST00000602499 ADAMTS12P58397 1594 aa36.87■■■■□ 3.49
UBE2E3-207ENST00000602499 CHD1O14646 1710 aa36.85■■■■□ 3.49
UBE2E3-207ENST00000602499 FBLN2P98095 1184 aa36.85■■■■□ 3.49
UBE2E3-207ENST00000602499 RUSC2Q8N2Y8 1516 aa36.83■■■■□ 3.49
UBE2E3-207ENST00000602499 CUL7Q14999 1698 aa36.8■■■■□ 3.48
UBE2E3-207ENST00000602499 EEA1Q15075 1411 aa36.74■■■■□ 3.47
UBE2E3-207ENST00000602499 GRIN2AQ12879 1464 aa36.73■■■■□ 3.47
UBE2E3-207ENST00000602499 CARMIL1Q5VZK9 1371 aa36.7■■■■□ 3.47
UBE2E3-207ENST00000602499 RIMBP3CA6NJZ7 1639 aa36.59■■■■□ 3.45
UBE2E3-207ENST00000602499 RIMBP3BA6NNM3 1639 aa36.59■■■■□ 3.45
UBE2E3-207ENST00000602499 RIMBP3Q9UFD9 1639 aa36.59■■■■□ 3.45
UBE2E3-207ENST00000602499 CSRNP3Q8WYN3 585 aa36.59■■■■□ 3.45
UBE2E3-207ENST00000602499 NUP160Q12769 1436 aa36.58■■■■□ 3.45
UBE2E3-207ENST00000602499 RAPGEF2Q9Y4G8 1499 aa36.53■■■■□ 3.44
UBE2E3-207ENST00000602499 PRXQ9BXM0 1461 aa36.52■■■■□ 3.44
UBE2E3-207ENST00000602499 CLASP1Q7Z460 1538 aa36.52■■■■□ 3.44
UBE2E3-207ENST00000602499 CEP170Q5SW79 1584 aa36.5■■■■□ 3.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms