RNA–Protein interactions for RNA: ENST00000602475.5

UBE2E3-205, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 3 BASIC

Gene UBE2E3, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-205ENST00000602475 NISCHQ9Y2I1 1504 aa39.09■■■■□ 3.85
UBE2E3-205ENST00000602475 ABCC9O60706 1549 aa35.83■■■■□ 3.33
UBE2E3-205ENST00000602475 CCDC180Q9P1Z9 1646 aa35.38■■■■□ 3.25
UBE2E3-205ENST00000602475 DNAJC5BQ9UF47 199 aa33.92■■■■□ 3.02
UBE2E3-205ENST00000602475 RB1CC1Q8TDY2 1594 aa33.91■■■■□ 3.02
UBE2E3-205ENST00000602475 NACADO15069 1562 aa33.52■■■□□ 2.96
UBE2E3-205ENST00000602475 DCAF8L2P0C7V8 631 aa33.28■■■□□ 2.92
UBE2E3-205ENST00000602475 PABPN1Q86U42 306 aaKnown RBP eCLIP33.24■■■□□ 2.91
UBE2E3-205ENST00000602475 UNC13AQ9UPW8 1703 aa33.17■■■□□ 2.9
UBE2E3-205ENST00000602475 BICRAQ9NZM4 1560 aa32.86■■■□□ 2.85
UBE2E3-205ENST00000602475 MYO15BQ96JP2 1530 aa32.83■■■□□ 2.85
UBE2E3-205ENST00000602475 SHROOM4Q9ULL8 1493 aa32.41■■■□□ 2.78
UBE2E3-205ENST00000602475 CC2D2AQ9P2K1 1620 aa32.34■■■□□ 2.77
UBE2E3-205ENST00000602475 CECR2Q9BXF3 1484 aa32.32■■■□□ 2.76
UBE2E3-205ENST00000602475 ZCCHC6Q5VYS8 1495 aaKnown RBP32.29■■■□□ 2.76
UBE2E3-205ENST00000602475 DCAF1Q9Y4B6 1507 aa32.24■■■□□ 2.75
UBE2E3-205ENST00000602475 SCRIBQ14160 1630 aa32.22■■■□□ 2.75
UBE2E3-205ENST00000602475 EIF4G1Q04637 1599 aaKnown RBP32.14■■■□□ 2.74
UBE2E3-205ENST00000602475 DNAJC5Q9H3Z4 198 aa31.56■■■□□ 2.64
UBE2E3-205ENST00000602475 CUX2O14529 1486 aa31.08■■■□□ 2.57
UBE2E3-205ENST00000602475 ERCC6Q03468 1493 aa31.03■■■□□ 2.56
UBE2E3-205ENST00000602475 NCAPD3P42695 1498 aa30.89■■■□□ 2.53
UBE2E3-205ENST00000602475 ATAD2BQ9ULI0 1458 aa30.75■■■□□ 2.51
UBE2E3-205ENST00000602475 SMARCA2P51531 1590 aa30.7■■■□□ 2.5
UBE2E3-205ENST00000602475 HMGXB3Q12766 1538 aa30.68■■■□□ 2.5
UBE2E3-205ENST00000602475 SMARCA4P51532 1647 aa30.65■■■□□ 2.5
UBE2E3-205ENST00000602475 NESP48681 1621 aa30.6■■■□□ 2.49
UBE2E3-205ENST00000602475 BAZ1BQ9UIG0 1483 aaKnown RBP30.49■■■□□ 2.47
UBE2E3-205ENST00000602475 THOC2Q8NI27 1593 aaKnown RBP30.43■■■□□ 2.46
UBE2E3-205ENST00000602475 BAZ1AQ9NRL2 1556 aaPredicted RBP30.42■■■□□ 2.46
UBE2E3-205ENST00000602475 LAMC3Q9Y6N6 1575 aa30.36■■■□□ 2.45
UBE2E3-205ENST00000602475 PEG3Q9GZU2 1588 aa30.3■■■□□ 2.44
UBE2E3-205ENST00000602475 KIF21AQ7Z4S6 1674 aa30.28■■■□□ 2.44
UBE2E3-205ENST00000602475 PDS5BQ9NTI5 1447 aa30.18■■■□□ 2.42
UBE2E3-205ENST00000602475 MROH2BQ7Z745 1585 aa30.11■■■□□ 2.41
UBE2E3-205ENST00000602475 TRIM41Q8WV44 630 aa30.08■■■□□ 2.41
UBE2E3-205ENST00000602475 MRC2Q9UBG0 1479 aa29.96■■■□□ 2.39
UBE2E3-205ENST00000602475 CADPSQ9ULU8 1353 aa29.94■■■□□ 2.38
UBE2E3-205ENST00000602475 WDR62O43379 1518 aa29.88■■■□□ 2.37
UBE2E3-205ENST00000602475 WIZO95785 1651 aa29.78■■■□□ 2.36
UBE2E3-205ENST00000602475 CEP164Q9UPV0 1460 aa29.76■■■□□ 2.35
UBE2E3-205ENST00000602475 FANCD2Q9BXW9 1451 aa29.65■■■□□ 2.34
UBE2E3-205ENST00000602475 OSCARQ8IYS5 282 aa29.56■■■□□ 2.32
UBE2E3-205ENST00000602475 CFTRP13569 1480 aa29.49■■■□□ 2.31
UBE2E3-205ENST00000602475 URB2Q14146 1524 aaKnown RBP29.4■■■□□ 2.3
UBE2E3-205ENST00000602475 TOP2AP11388 1531 aaKnown RBP29.36■■■□□ 2.29
UBE2E3-205ENST00000602475 PRDM2Q13029 1718 aa29.32■■■□□ 2.28
UBE2E3-205ENST00000602475 RIMBP3CA6NJZ7 1639 aa29.28■■■□□ 2.28
UBE2E3-205ENST00000602475 RIMBP3BA6NNM3 1639 aa29.28■■■□□ 2.28
UBE2E3-205ENST00000602475 RIMBP3Q9UFD9 1639 aa29.28■■■□□ 2.28
UBE2E3-205ENST00000602475 RSF1Q96T23 1441 aaPredicted RBP29.28■■■□□ 2.28
UBE2E3-205ENST00000602475 IFT140Q96RY7 1462 aa29.16■■■□□ 2.26
UBE2E3-205ENST00000602475 ZNF608Q9ULD9 1512 aaPredicted RBP29.13■■■□□ 2.25
UBE2E3-205ENST00000602475 ARHGEF11O15085 1522 aa29.1■■■□□ 2.25
UBE2E3-205ENST00000602475 TOPBP1Q92547 1522 aa29.03■■■□□ 2.24
UBE2E3-205ENST00000602475 EIF4G3O43432 1585 aaKnown RBP29.01■■■□□ 2.24
UBE2E3-205ENST00000602475 CCDC88BA6NC98 1476 aa28.98■■■□□ 2.23
UBE2E3-205ENST00000602475 ABCC8Q09428 1581 aa28.95■■■□□ 2.22
UBE2E3-205ENST00000602475 CHD1O14646 1710 aa28.94■■■□□ 2.22
UBE2E3-205ENST00000602475 CYB5RLQ6IPT4 315 aa28.91■■■□□ 2.22
UBE2E3-205ENST00000602475 DNMBPQ6XZF7 1577 aa28.91■■■□□ 2.22
UBE2E3-205ENST00000602475 TRHP20396 242 aaPredicted RBP28.82■■■□□ 2.2
UBE2E3-205ENST00000602475 AQRO60306 1485 aaKnown RBP eCLIP28.8■■■□□ 2.2
UBE2E3-205ENST00000602475 TARBP1Q13395 1621 aaKnown RBP28.8■■■□□ 2.2
UBE2E3-205ENST00000602475 FBLN2P98095 1184 aa28.79■■■□□ 2.2
UBE2E3-205ENST00000602475 ARAP1Q96P48 1450 aa28.77■■■□□ 2.2
UBE2E3-205ENST00000602475 POLA1P09884 1462 aaPredicted RBP28.69■■■□□ 2.18
UBE2E3-205ENST00000602475 RAD54L2Q9Y4B4 1467 aa28.59■■■□□ 2.17
UBE2E3-205ENST00000602475 SOGA1O94964 1423 aa28.55■■■□□ 2.16
UBE2E3-205ENST00000602475 TDRD9Q8NDG6 1382 aaKnown RBP28.54■■■□□ 2.16
UBE2E3-205ENST00000602475 SNAPC4Q5SXM2 1469 aa28.53■■■□□ 2.16
UBE2E3-205ENST00000602475 WDR97A6NE52 1622 aa28.51■■■□□ 2.15
UBE2E3-205ENST00000602475 SYNJ1O43426 1573 aa28.5■■■□□ 2.15
UBE2E3-205ENST00000602475 CLASP1Q7Z460 1538 aa28.49■■■□□ 2.15
UBE2E3-205ENST00000602475 CHMP7Q8WUX9 453 aaPredicted RBP28.47■■■□□ 2.15
UBE2E3-205ENST00000602475 FGD5Q6ZNL6 1462 aa28.46■■■□□ 2.15
UBE2E3-205ENST00000602475 MAGI1Q96QZ7 1491 aaPredicted RBP28.44■■■□□ 2.14
UBE2E3-205ENST00000602475 AEBP2Q6ZN18 517 aaPredicted RBP28.39■■■□□ 2.14
UBE2E3-205ENST00000602475 GRIN2BQ13224 1484 aa28.38■■■□□ 2.13
UBE2E3-205ENST00000602475 SYNJ2O15056 1496 aa28.34■■■□□ 2.13
UBE2E3-205ENST00000602475 CUX1P39880 1505 aa28.33■■■□□ 2.13
UBE2E3-205ENST00000602475 PBRM1Q86U86 1689 aa28.32■■■□□ 2.12
UBE2E3-205ENST00000602475 GAPVD1Q14C86 1478 aa28.24■■■□□ 2.11
UBE2E3-205ENST00000602475 ABCA5Q8WWZ7 1642 aa28.12■■■□□ 2.09
UBE2E3-205ENST00000602475 ABCA10Q8WWZ4 1543 aa28.08■■■□□ 2.09
UBE2E3-205ENST00000602475 ERCC6L2Q5T890 1561 aa28.01■■■□□ 2.07
UBE2E3-205ENST00000602475 GRIN2AQ12879 1464 aa28.01■■■□□ 2.07
UBE2E3-205ENST00000602475 ADAMTS12P58397 1594 aa27.96■■■□□ 2.07
UBE2E3-205ENST00000602475 CEP170Q5SW79 1584 aa27.96■■■□□ 2.07
UBE2E3-205ENST00000602475 NUP160Q12769 1436 aa27.9■■■□□ 2.06
UBE2E3-205ENST00000602475 WRNQ14191 1432 aaPredicted RBP eCLIP27.89■■■□□ 2.06
UBE2E3-205ENST00000602475 SHROOM2Q13796 1616 aa27.87■■■□□ 2.05
UBE2E3-205ENST00000602475 KIF13AQ9H1H9 1805 aa27.83■■■□□ 2.05
UBE2E3-205ENST00000602475 FHAD1B1AJZ9 1412 aa27.83■■■□□ 2.05
UBE2E3-205ENST00000602475 BIVM-ERCC5R4GMW8 1640 aa27.79■■■□□ 2.04
UBE2E3-205ENST00000602475 TOP2BQ02880 1626 aa27.77■■■□□ 2.04
UBE2E3-205ENST00000602475 ERICH3Q5RHP9 1530 aa27.74■■■□□ 2.03
UBE2E3-205ENST00000602475 PRG4Q92954 1404 aaPredicted RBP27.71■■■□□ 2.03
UBE2E3-205ENST00000602475 SUPT5HO00267 1087 aaKnown RBP27.68■■■□□ 2.02
UBE2E3-205ENST00000602475 JPH4Q96JJ6 628 aa27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms