RNA–Protein interactions for RNA: ENST00000602361.1

RMRP-201, Transcript of RNA component of mitochondrial RNA processing endoribonuclease, humanhuman

BASIC

Gene RMRP, Length 268 nt, Biotype lincRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMRP-201ENST00000602361 NISCHQ9Y2I1 1504 aa27.25■■□□□ 1.95
RMRP-201ENST00000602361 CCDC180Q9P1Z9 1646 aa24.47■■□□□ 1.51
RMRP-201ENST00000602361 ABCC9O60706 1549 aa24.41■■□□□ 1.5
RMRP-201ENST00000602361 RB1CC1Q8TDY2 1594 aa23.34■■□□□ 1.33
RMRP-201ENST00000602361 NACADO15069 1562 aa23.18■■□□□ 1.3
RMRP-201ENST00000602361 DCAF8L2P0C7V8 631 aa23.08■■□□□ 1.29
RMRP-201ENST00000602361 MYO15BQ96JP2 1530 aa22.88■■□□□ 1.25
RMRP-201ENST00000602361 DNAJC5BQ9UF47 199 aa22.81■■□□□ 1.24
RMRP-201ENST00000602361 PABPN1Q86U42 306 aaKnown RBP eCLIP22.73■■□□□ 1.23
RMRP-201ENST00000602361 UNC13AQ9UPW8 1703 aa22.61■■□□□ 1.21
RMRP-201ENST00000602361 ZCCHC6Q5VYS8 1495 aaKnown RBP22.57■■□□□ 1.2
RMRP-201ENST00000602361 DCAF1Q9Y4B6 1507 aa22.57■■□□□ 1.2
RMRP-201ENST00000602361 BICRAQ9NZM4 1560 aa22.5■■□□□ 1.19
RMRP-201ENST00000602361 SHROOM4Q9ULL8 1493 aa22.42■■□□□ 1.18
RMRP-201ENST00000602361 SCRIBQ14160 1630 aa22.22■■□□□ 1.15
RMRP-201ENST00000602361 CC2D2AQ9P2K1 1620 aa22.05■■□□□ 1.12
RMRP-201ENST00000602361 CECR2Q9BXF3 1484 aa22.04■■□□□ 1.12
RMRP-201ENST00000602361 EIF4G1Q04637 1599 aaKnown RBP22.03■■□□□ 1.12
RMRP-201ENST00000602361 NCAPD3P42695 1498 aa21.39■■□□□ 1.01
RMRP-201ENST00000602361 SMARCA2P51531 1590 aa21.29■■□□□ 1
RMRP-201ENST00000602361 ATAD2BQ9ULI0 1458 aa21.27■■□□□ 1
RMRP-201ENST00000602361 SMARCA4P51532 1647 aa21.23■□□□□ 0.99
RMRP-201ENST00000602361 HMGXB3Q12766 1538 aa21.22■□□□□ 0.99
RMRP-201ENST00000602361 BAZ1AQ9NRL2 1556 aaPredicted RBP21.2■□□□□ 0.98
RMRP-201ENST00000602361 ERCC6Q03468 1493 aa21.19■□□□□ 0.98
RMRP-201ENST00000602361 CUX2O14529 1486 aa21.14■□□□□ 0.98
RMRP-201ENST00000602361 BAZ1BQ9UIG0 1483 aaKnown RBP21.12■□□□□ 0.97
RMRP-201ENST00000602361 DNAJC5Q9H3Z4 198 aa21.11■□□□□ 0.97
RMRP-201ENST00000602361 PEG3Q9GZU2 1588 aa21.06■□□□□ 0.96
RMRP-201ENST00000602361 MROH2BQ7Z745 1585 aa20.93■□□□□ 0.94
RMRP-201ENST00000602361 NESP48681 1621 aa20.92■□□□□ 0.94
RMRP-201ENST00000602361 LAMC3Q9Y6N6 1575 aa20.91■□□□□ 0.94
RMRP-201ENST00000602361 PDS5BQ9NTI5 1447 aa20.85■□□□□ 0.93
RMRP-201ENST00000602361 CADPSQ9ULU8 1353 aa20.74■□□□□ 0.91
RMRP-201ENST00000602361 THOC2Q8NI27 1593 aaKnown RBP20.72■□□□□ 0.91
RMRP-201ENST00000602361 WIZO95785 1651 aa20.66■□□□□ 0.9
RMRP-201ENST00000602361 KIF21AQ7Z4S6 1674 aa20.65■□□□□ 0.9
RMRP-201ENST00000602361 MRC2Q9UBG0 1479 aa20.6■□□□□ 0.89
RMRP-201ENST00000602361 RSF1Q96T23 1441 aaPredicted RBP20.54■□□□□ 0.88
RMRP-201ENST00000602361 CEP164Q9UPV0 1460 aa20.54■□□□□ 0.88
RMRP-201ENST00000602361 WDR62O43379 1518 aa20.51■□□□□ 0.87
RMRP-201ENST00000602361 TOP2AP11388 1531 aaKnown RBP20.49■□□□□ 0.87
RMRP-201ENST00000602361 CFTRP13569 1480 aa20.48■□□□□ 0.87
RMRP-201ENST00000602361 FANCD2Q9BXW9 1451 aa20.48■□□□□ 0.87
RMRP-201ENST00000602361 URB2Q14146 1524 aaKnown RBP20.24■□□□□ 0.83
RMRP-201ENST00000602361 OSCARQ8IYS5 282 aa20.23■□□□□ 0.83
RMRP-201ENST00000602361 CCDC88BA6NC98 1476 aa20.23■□□□□ 0.83
RMRP-201ENST00000602361 PRDM2Q13029 1718 aa20.22■□□□□ 0.83
RMRP-201ENST00000602361 ABCC8Q09428 1581 aa20.17■□□□□ 0.82
RMRP-201ENST00000602361 TRIM41Q8WV44 630 aa20.17■□□□□ 0.82
RMRP-201ENST00000602361 IFT140Q96RY7 1462 aa20.13■□□□□ 0.81
RMRP-201ENST00000602361 TOPBP1Q92547 1522 aa20.07■□□□□ 0.8
RMRP-201ENST00000602361 DNMBPQ6XZF7 1577 aa20.01■□□□□ 0.79
RMRP-201ENST00000602361 ZNF608Q9ULD9 1512 aaPredicted RBP19.97■□□□□ 0.79
RMRP-201ENST00000602361 EIF4G3O43432 1585 aaKnown RBP19.9■□□□□ 0.78
RMRP-201ENST00000602361 POLA1P09884 1462 aaPredicted RBP19.86■□□□□ 0.77
RMRP-201ENST00000602361 TARBP1Q13395 1621 aaKnown RBP19.84■□□□□ 0.77
RMRP-201ENST00000602361 AQRO60306 1485 aaKnown RBP eCLIP19.84■□□□□ 0.77
RMRP-201ENST00000602361 SOGA1O94964 1423 aa19.83■□□□□ 0.76
RMRP-201ENST00000602361 FBLN2P98095 1184 aa19.81■□□□□ 0.76
RMRP-201ENST00000602361 RIMBP3CA6NJZ7 1639 aa19.8■□□□□ 0.76
RMRP-201ENST00000602361 RIMBP3BA6NNM3 1639 aa19.8■□□□□ 0.76
RMRP-201ENST00000602361 RIMBP3Q9UFD9 1639 aa19.8■□□□□ 0.76
RMRP-201ENST00000602361 WDR97A6NE52 1622 aa19.79■□□□□ 0.76
RMRP-201ENST00000602361 ARHGEF11O15085 1522 aa19.78■□□□□ 0.76
RMRP-201ENST00000602361 RAD54L2Q9Y4B4 1467 aa19.74■□□□□ 0.75
RMRP-201ENST00000602361 TDRD9Q8NDG6 1382 aaKnown RBP19.74■□□□□ 0.75
RMRP-201ENST00000602361 FGD5Q6ZNL6 1462 aa19.73■□□□□ 0.75
RMRP-201ENST00000602361 CHD1O14646 1710 aa19.71■□□□□ 0.75
RMRP-201ENST00000602361 CHMP7Q8WUX9 453 aaPredicted RBP19.7■□□□□ 0.74
RMRP-201ENST00000602361 SUPT5HO00267 1087 aaKnown RBP19.69■□□□□ 0.74
RMRP-201ENST00000602361 CYB5RLQ6IPT4 315 aa19.69■□□□□ 0.74
RMRP-201ENST00000602361 MAGI1Q96QZ7 1491 aaPredicted RBP19.67■□□□□ 0.74
RMRP-201ENST00000602361 CUX1P39880 1505 aa19.67■□□□□ 0.74
RMRP-201ENST00000602361 GRIN2BQ13224 1484 aa19.67■□□□□ 0.74
RMRP-201ENST00000602361 SNAPC4Q5SXM2 1469 aa19.65■□□□□ 0.74
RMRP-201ENST00000602361 SYNJ1O43426 1573 aa19.61■□□□□ 0.73
RMRP-201ENST00000602361 SYNJ2O15056 1496 aa19.59■□□□□ 0.73
RMRP-201ENST00000602361 GAPVD1Q14C86 1478 aa19.58■□□□□ 0.72
RMRP-201ENST00000602361 ARAP1Q96P48 1450 aa19.55■□□□□ 0.72
RMRP-201ENST00000602361 ABCA10Q8WWZ4 1543 aa19.54■□□□□ 0.72
RMRP-201ENST00000602361 WRNQ14191 1432 aaPredicted RBP eCLIP19.53■□□□□ 0.72
RMRP-201ENST00000602361 TRHP20396 242 aaPredicted RBP19.53■□□□□ 0.72
RMRP-201ENST00000602361 CLASP1Q7Z460 1538 aa19.52■□□□□ 0.72
RMRP-201ENST00000602361 PBRM1Q86U86 1689 aa19.49■□□□□ 0.71
RMRP-201ENST00000602361 ABCA5Q8WWZ7 1642 aa19.45■□□□□ 0.7
RMRP-201ENST00000602361 TOP2BQ02880 1626 aa19.41■□□□□ 0.7
RMRP-201ENST00000602361 BIVM-ERCC5R4GMW8 1640 aa19.39■□□□□ 0.69
RMRP-201ENST00000602361 GRIN2AQ12879 1464 aa19.38■□□□□ 0.69
RMRP-201ENST00000602361 FHAD1B1AJZ9 1412 aa19.35■□□□□ 0.69
RMRP-201ENST00000602361 ERICH3Q5RHP9 1530 aa19.33■□□□□ 0.68
RMRP-201ENST00000602361 ADAMTS12P58397 1594 aa19.32■□□□□ 0.68
RMRP-201ENST00000602361 NUP160Q12769 1436 aa19.3■□□□□ 0.68
RMRP-201ENST00000602361 CEP170Q5SW79 1584 aa19.23■□□□□ 0.67
RMRP-201ENST00000602361 SHROOM2Q13796 1616 aa19.18■□□□□ 0.66
RMRP-201ENST00000602361 JPH4Q96JJ6 628 aa19.16■□□□□ 0.66
RMRP-201ENST00000602361 PRG4Q92954 1404 aaPredicted RBP19.14■□□□□ 0.65
RMRP-201ENST00000602361 KIF27Q86VH2 1401 aa19.13■□□□□ 0.65
RMRP-201ENST00000602361 ERCC6L2Q5T890 1561 aa19.13■□□□□ 0.65
RMRP-201ENST00000602361 NPM1P06748 294 aaKnown RBP eCLIP19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms