RNA–Protein interactions for RNA: ENST00000602338.1

TTLL3-233, Transcript of tubulin tyrosine ligase like 3, humanhuman

Gene TTLL3, Length 693 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTLL3-233ENST00000602338 NISCHQ9Y2I1 1504 aa30.38■■■□□ 2.45
TTLL3-233ENST00000602338 ABCC9O60706 1549 aa27.41■■□□□ 1.98
TTLL3-233ENST00000602338 CCDC180Q9P1Z9 1646 aa27.37■■□□□ 1.97
TTLL3-233ENST00000602338 RB1CC1Q8TDY2 1594 aa26.04■■□□□ 1.76
TTLL3-233ENST00000602338 NACADO15069 1562 aa25.82■■□□□ 1.72
TTLL3-233ENST00000602338 DNAJC5BQ9UF47 199 aa25.78■■□□□ 1.72
TTLL3-233ENST00000602338 UNC13AQ9UPW8 1703 aa25.59■■□□□ 1.69
TTLL3-233ENST00000602338 DCAF8L2P0C7V8 631 aa25.54■■□□□ 1.68
TTLL3-233ENST00000602338 PABPN1Q86U42 306 aaKnown RBP eCLIP25.44■■□□□ 1.66
TTLL3-233ENST00000602338 MYO15BQ96JP2 1530 aa25.43■■□□□ 1.66
TTLL3-233ENST00000602338 BICRAQ9NZM4 1560 aa25.36■■□□□ 1.65
TTLL3-233ENST00000602338 ZCCHC6Q5VYS8 1495 aaKnown RBP25.2■■□□□ 1.62
TTLL3-233ENST00000602338 DCAF1Q9Y4B6 1507 aa25.08■■□□□ 1.61
TTLL3-233ENST00000602338 SCRIBQ14160 1630 aa24.94■■□□□ 1.58
TTLL3-233ENST00000602338 SHROOM4Q9ULL8 1493 aa24.92■■□□□ 1.58
TTLL3-233ENST00000602338 CC2D2AQ9P2K1 1620 aa24.79■■□□□ 1.56
TTLL3-233ENST00000602338 EIF4G1Q04637 1599 aaKnown RBP24.71■■□□□ 1.55
TTLL3-233ENST00000602338 CECR2Q9BXF3 1484 aa24.69■■□□□ 1.54
TTLL3-233ENST00000602338 NCAPD3P42695 1498 aa23.82■■□□□ 1.4
TTLL3-233ENST00000602338 SMARCA4P51532 1647 aa23.77■■□□□ 1.4
TTLL3-233ENST00000602338 ATAD2BQ9ULI0 1458 aa23.76■■□□□ 1.39
TTLL3-233ENST00000602338 HMGXB3Q12766 1538 aa23.69■■□□□ 1.38
TTLL3-233ENST00000602338 SMARCA2P51531 1590 aa23.69■■□□□ 1.38
TTLL3-233ENST00000602338 DNAJC5Q9H3Z4 198 aa23.68■■□□□ 1.38
TTLL3-233ENST00000602338 CUX2O14529 1486 aa23.64■■□□□ 1.38
TTLL3-233ENST00000602338 ERCC6Q03468 1493 aa23.63■■□□□ 1.37
TTLL3-233ENST00000602338 BAZ1AQ9NRL2 1556 aaPredicted RBP23.58■■□□□ 1.37
TTLL3-233ENST00000602338 NESP48681 1621 aa23.55■■□□□ 1.36
TTLL3-233ENST00000602338 PEG3Q9GZU2 1588 aa23.53■■□□□ 1.36
TTLL3-233ENST00000602338 BAZ1BQ9UIG0 1483 aaKnown RBP23.52■■□□□ 1.36
TTLL3-233ENST00000602338 MROH2BQ7Z745 1585 aa23.44■■□□□ 1.34
TTLL3-233ENST00000602338 THOC2Q8NI27 1593 aaKnown RBP23.39■■□□□ 1.33
TTLL3-233ENST00000602338 LAMC3Q9Y6N6 1575 aa23.34■■□□□ 1.33
TTLL3-233ENST00000602338 KIF21AQ7Z4S6 1674 aa23.31■■□□□ 1.32
TTLL3-233ENST00000602338 WIZO95785 1651 aa23.18■■□□□ 1.3
TTLL3-233ENST00000602338 PDS5BQ9NTI5 1447 aa23.13■■□□□ 1.29
TTLL3-233ENST00000602338 CADPSQ9ULU8 1353 aa23.07■■□□□ 1.28
TTLL3-233ENST00000602338 MRC2Q9UBG0 1479 aa23.01■■□□□ 1.27
TTLL3-233ENST00000602338 WDR62O43379 1518 aa22.99■■□□□ 1.27
TTLL3-233ENST00000602338 CEP164Q9UPV0 1460 aa22.89■■□□□ 1.25
TTLL3-233ENST00000602338 RSF1Q96T23 1441 aaPredicted RBP22.87■■□□□ 1.25
TTLL3-233ENST00000602338 FANCD2Q9BXW9 1451 aa22.85■■□□□ 1.25
TTLL3-233ENST00000602338 TOP2AP11388 1531 aaKnown RBP22.85■■□□□ 1.25
TTLL3-233ENST00000602338 CFTRP13569 1480 aa22.83■■□□□ 1.25
TTLL3-233ENST00000602338 URB2Q14146 1524 aaKnown RBP22.72■■□□□ 1.23
TTLL3-233ENST00000602338 PRDM2Q13029 1718 aa22.71■■□□□ 1.23
TTLL3-233ENST00000602338 TRIM41Q8WV44 630 aa22.61■■□□□ 1.21
TTLL3-233ENST00000602338 CCDC88BA6NC98 1476 aa22.55■■□□□ 1.2
TTLL3-233ENST00000602338 ZNF608Q9ULD9 1512 aaPredicted RBP22.45■■□□□ 1.18
TTLL3-233ENST00000602338 OSCARQ8IYS5 282 aa22.44■■□□□ 1.18
TTLL3-233ENST00000602338 TOPBP1Q92547 1522 aa22.43■■□□□ 1.18
TTLL3-233ENST00000602338 IFT140Q96RY7 1462 aa22.41■■□□□ 1.18
TTLL3-233ENST00000602338 EIF4G3O43432 1585 aaKnown RBP22.37■■□□□ 1.17
TTLL3-233ENST00000602338 DNMBPQ6XZF7 1577 aa22.35■■□□□ 1.17
TTLL3-233ENST00000602338 RIMBP3CA6NJZ7 1639 aa22.33■■□□□ 1.17
TTLL3-233ENST00000602338 RIMBP3BA6NNM3 1639 aa22.33■■□□□ 1.17
TTLL3-233ENST00000602338 RIMBP3Q9UFD9 1639 aa22.33■■□□□ 1.17
TTLL3-233ENST00000602338 ABCC8Q09428 1581 aa22.29■■□□□ 1.16
TTLL3-233ENST00000602338 TARBP1Q13395 1621 aaKnown RBP22.28■■□□□ 1.16
TTLL3-233ENST00000602338 CHD1O14646 1710 aa22.23■■□□□ 1.15
TTLL3-233ENST00000602338 ARHGEF11O15085 1522 aa22.22■■□□□ 1.15
TTLL3-233ENST00000602338 POLA1P09884 1462 aaPredicted RBP22.2■■□□□ 1.14
TTLL3-233ENST00000602338 AQRO60306 1485 aaKnown RBP eCLIP22.18■■□□□ 1.14
TTLL3-233ENST00000602338 RAD54L2Q9Y4B4 1467 aa22.11■■□□□ 1.13
TTLL3-233ENST00000602338 FGD5Q6ZNL6 1462 aa22.04■■□□□ 1.12
TTLL3-233ENST00000602338 CUX1P39880 1505 aa22.03■■□□□ 1.12
TTLL3-233ENST00000602338 SOGA1O94964 1423 aa22.02■■□□□ 1.12
TTLL3-233ENST00000602338 TDRD9Q8NDG6 1382 aaKnown RBP22.01■■□□□ 1.11
TTLL3-233ENST00000602338 ARAP1Q96P48 1450 aa22.01■■□□□ 1.11
TTLL3-233ENST00000602338 WDR97A6NE52 1622 aa22■■□□□ 1.11
TTLL3-233ENST00000602338 SNAPC4Q5SXM2 1469 aa21.98■■□□□ 1.11
TTLL3-233ENST00000602338 FBLN2P98095 1184 aa21.97■■□□□ 1.11
TTLL3-233ENST00000602338 CYB5RLQ6IPT4 315 aa21.95■■□□□ 1.1
TTLL3-233ENST00000602338 CLASP1Q7Z460 1538 aa21.94■■□□□ 1.1
TTLL3-233ENST00000602338 MAGI1Q96QZ7 1491 aaPredicted RBP21.9■■□□□ 1.1
TTLL3-233ENST00000602338 PBRM1Q86U86 1689 aa21.89■■□□□ 1.1
TTLL3-233ENST00000602338 GRIN2BQ13224 1484 aa21.87■■□□□ 1.09
TTLL3-233ENST00000602338 SYNJ1O43426 1573 aa21.87■■□□□ 1.09
TTLL3-233ENST00000602338 SYNJ2O15056 1496 aa21.83■■□□□ 1.08
TTLL3-233ENST00000602338 ABCA5Q8WWZ7 1642 aa21.82■■□□□ 1.08
TTLL3-233ENST00000602338 GAPVD1Q14C86 1478 aa21.78■■□□□ 1.08
TTLL3-233ENST00000602338 CHMP7Q8WUX9 453 aaPredicted RBP21.78■■□□□ 1.08
TTLL3-233ENST00000602338 ABCA10Q8WWZ4 1543 aa21.77■■□□□ 1.08
TTLL3-233ENST00000602338 TRHP20396 242 aaPredicted RBP21.71■■□□□ 1.07
TTLL3-233ENST00000602338 SUPT5HO00267 1087 aaKnown RBP21.69■■□□□ 1.06
TTLL3-233ENST00000602338 BIVM-ERCC5R4GMW8 1640 aa21.68■■□□□ 1.06
TTLL3-233ENST00000602338 ADAMTS12P58397 1594 aa21.65■■□□□ 1.06
TTLL3-233ENST00000602338 TOP2BQ02880 1626 aa21.65■■□□□ 1.06
TTLL3-233ENST00000602338 GRIN2AQ12879 1464 aa21.63■■□□□ 1.05
TTLL3-233ENST00000602338 ERCC6L2Q5T890 1561 aa21.61■■□□□ 1.05
TTLL3-233ENST00000602338 WRNQ14191 1432 aaPredicted RBP eCLIP21.61■■□□□ 1.05
TTLL3-233ENST00000602338 CEP170Q5SW79 1584 aa21.61■■□□□ 1.05
TTLL3-233ENST00000602338 NUP160Q12769 1436 aa21.55■■□□□ 1.04
TTLL3-233ENST00000602338 SHROOM2Q13796 1616 aa21.53■■□□□ 1.04
TTLL3-233ENST00000602338 ERICH3Q5RHP9 1530 aa21.5■■□□□ 1.03
TTLL3-233ENST00000602338 FHAD1B1AJZ9 1412 aa21.49■■□□□ 1.03
TTLL3-233ENST00000602338 RUSC2Q8N2Y8 1516 aa21.37■■□□□ 1.01
TTLL3-233ENST00000602338 KIF13AQ9H1H9 1805 aa21.32■■□□□ 1
TTLL3-233ENST00000602338 PRG4Q92954 1404 aaPredicted RBP21.31■■□□□ 1
TTLL3-233ENST00000602338 JPH4Q96JJ6 628 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms