RNA–Protein interactions for RNA: ENST00000602053.1

C3-217, Transcript of complement C3, humanhuman

TSL 2

Gene C3, Length 621 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3-217ENST00000602053 NISCHQ9Y2I1 1504 aa18.36■□□□□ 0.53
C3-217ENST00000602053 CCDC180Q9P1Z9 1646 aa16.27■□□□□ 0.19
C3-217ENST00000602053 ZCCHC6Q5VYS8 1495 aaKnown RBP15.44■□□□□ 0.06
C3-217ENST00000602053 DCAF1Q9Y4B6 1507 aa15.31■□□□□ 0.04
C3-217ENST00000602053 MYO15BQ96JP2 1530 aa15.21■□□□□ 0.03
C3-217ENST00000602053 ABCC9O60706 1549 aa15.19■□□□□ 0.02
C3-217ENST00000602053 NACADO15069 1562 aa15.09■□□□□ 0.01
C3-217ENST00000602053 RB1CC1Q8TDY2 1594 aa14.98□□□□□ -0.01
C3-217ENST00000602053 DCAF8L2P0C7V8 631 aa14.89□□□□□ -0.03
C3-217ENST00000602053 SCRIBQ14160 1630 aa14.73□□□□□ -0.05
C3-217ENST00000602053 UNC13AQ9UPW8 1703 aa14.7□□□□□ -0.06
C3-217ENST00000602053 SHROOM4Q9ULL8 1493 aa14.63□□□□□ -0.07
C3-217ENST00000602053 BICRAQ9NZM4 1560 aa14.47□□□□□ -0.09
C3-217ENST00000602053 BAZ1AQ9NRL2 1556 aaPredicted RBP14.25□□□□□ -0.13
C3-217ENST00000602053 SMARCA4P51532 1647 aa14.19□□□□□ -0.14
C3-217ENST00000602053 PABPN1Q86U42 306 aaKnown RBP eCLIP14.17□□□□□ -0.14
C3-217ENST00000602053 DNAJC5BQ9UF47 199 aa14.16□□□□□ -0.14
C3-217ENST00000602053 CECR2Q9BXF3 1484 aa14.16□□□□□ -0.14
C3-217ENST00000602053 RSF1Q96T23 1441 aaPredicted RBP14.12□□□□□ -0.15
C3-217ENST00000602053 MROH2BQ7Z745 1585 aa14.12□□□□□ -0.15
C3-217ENST00000602053 PEG3Q9GZU2 1588 aa14.09□□□□□ -0.15
C3-217ENST00000602053 EIF4G1Q04637 1599 aaKnown RBP14.05□□□□□ -0.16
C3-217ENST00000602053 WIZO95785 1651 aa14.02□□□□□ -0.16
C3-217ENST00000602053 SMARCA2P51531 1590 aa14□□□□□ -0.17
C3-217ENST00000602053 SUPT5HO00267 1087 aaKnown RBP13.98□□□□□ -0.17
C3-217ENST00000602053 TOP2AP11388 1531 aaKnown RBP13.95□□□□□ -0.18
C3-217ENST00000602053 HMGXB3Q12766 1538 aa13.92□□□□□ -0.18
C3-217ENST00000602053 ATAD2BQ9ULI0 1458 aa13.92□□□□□ -0.18
C3-217ENST00000602053 NCAPD3P42695 1498 aa13.86□□□□□ -0.19
C3-217ENST00000602053 BAZ1BQ9UIG0 1483 aaKnown RBP13.86□□□□□ -0.19
C3-217ENST00000602053 CC2D2AQ9P2K1 1620 aa13.86□□□□□ -0.19
C3-217ENST00000602053 CCDC88BA6NC98 1476 aa13.69□□□□□ -0.22
C3-217ENST00000602053 PRDM2Q13029 1718 aa13.64□□□□□ -0.23
C3-217ENST00000602053 CFTRP13569 1480 aa13.5□□□□□ -0.25
C3-217ENST00000602053 LAMC3Q9Y6N6 1575 aa13.48□□□□□ -0.25
C3-217ENST00000602053 CADPSQ9ULU8 1353 aa13.44□□□□□ -0.26
C3-217ENST00000602053 CHIC1Q5VXU3 224 aa13.39□□□□□ -0.27
C3-217ENST00000602053 ABCC8Q09428 1581 aa13.35□□□□□ -0.27
C3-217ENST00000602053 BIVM-ERCC5R4GMW8 1640 aa13.35□□□□□ -0.27
C3-217ENST00000602053 TOP2BQ02880 1626 aa13.32□□□□□ -0.28
C3-217ENST00000602053 WRNQ14191 1432 aaPredicted RBP eCLIP13.32□□□□□ -0.28
C3-217ENST00000602053 FANCD2Q9BXW9 1451 aa13.3□□□□□ -0.28
C3-217ENST00000602053 SYNJ1O43426 1573 aa13.3□□□□□ -0.28
C3-217ENST00000602053 PDS5BQ9NTI5 1447 aa13.3□□□□□ -0.28
C3-217ENST00000602053 NESP48681 1621 aa13.29□□□□□ -0.28
C3-217ENST00000602053 KIF21AQ7Z4S6 1674 aa13.29□□□□□ -0.28
C3-217ENST00000602053 CEP164Q9UPV0 1460 aa13.27□□□□□ -0.29
C3-217ENST00000602053 DNMBPQ6XZF7 1577 aa13.24□□□□□ -0.29
C3-217ENST00000602053 TRIM41Q8WV44 630 aa13.24□□□□□ -0.29
C3-217ENST00000602053 CUX1P39880 1505 aa13.23□□□□□ -0.29
C3-217ENST00000602053 EEA1Q15075 1411 aa13.16□□□□□ -0.3
C3-217ENST00000602053 TOPBP1Q92547 1522 aa13.16□□□□□ -0.3
C3-217ENST00000602053 DNAJC5Q9H3Z4 198 aa13.15□□□□□ -0.3
C3-217ENST00000602053 MRC2Q9UBG0 1479 aa13.15□□□□□ -0.3
C3-217ENST00000602053 WDR62O43379 1518 aa13.13□□□□□ -0.31
C3-217ENST00000602053 URB2Q14146 1524 aaKnown RBP13.13□□□□□ -0.31
C3-217ENST00000602053 THOC2Q8NI27 1593 aaKnown RBP13.13□□□□□ -0.31
C3-217ENST00000602053 FGD5Q6ZNL6 1462 aa13.11□□□□□ -0.31
C3-217ENST00000602053 WDR97A6NE52 1622 aa13.11□□□□□ -0.31
C3-217ENST00000602053 ERCC6Q03468 1493 aa13.1□□□□□ -0.31
C3-217ENST00000602053 POLA1P09884 1462 aaPredicted RBP13.08□□□□□ -0.32
C3-217ENST00000602053 ABCA10Q8WWZ4 1543 aa13.04□□□□□ -0.32
C3-217ENST00000602053 TARBP1Q13395 1621 aaKnown RBP13.02□□□□□ -0.32
C3-217ENST00000602053 SOGA1O94964 1423 aa13.02□□□□□ -0.33
C3-217ENST00000602053 KIF27Q86VH2 1401 aa13.02□□□□□ -0.33
C3-217ENST00000602053 KIF21BO75037 1637 aa13.02□□□□□ -0.33
C3-217ENST00000602053 ABCA5Q8WWZ7 1642 aa13□□□□□ -0.33
C3-217ENST00000602053 CUX2O14529 1486 aa13□□□□□ -0.33
C3-217ENST00000602053 IFT140Q96RY7 1462 aa12.97□□□□□ -0.33
C3-217ENST00000602053 CUL7Q14999 1698 aa12.96□□□□□ -0.33
C3-217ENST00000602053 ERICH3Q5RHP9 1530 aa12.95□□□□□ -0.34
C3-217ENST00000602053 RUSC2Q8N2Y8 1516 aa12.95□□□□□ -0.34
C3-217ENST00000602053 PBRM1Q86U86 1689 aa12.94□□□□□ -0.34
C3-217ENST00000602053 RAD54L2Q9Y4B4 1467 aa12.94□□□□□ -0.34
C3-217ENST00000602053 CSRNP3Q8WYN3 585 aa12.91□□□□□ -0.34
C3-217ENST00000602053 GOLGA3Q08378 1498 aa12.91□□□□□ -0.34
C3-217ENST00000602053 PRXQ9BXM0 1461 aa12.9□□□□□ -0.34
C3-217ENST00000602053 EIF4G3O43432 1585 aaKnown RBP12.89□□□□□ -0.35
C3-217ENST00000602053 GAPVD1Q14C86 1478 aa12.88□□□□□ -0.35
C3-217ENST00000602053 FAM9AQ8IZU1 332 aaPredicted RBP12.87□□□□□ -0.35
C3-217ENST00000602053 ADAMTS12P58397 1594 aa12.83□□□□□ -0.36
C3-217ENST00000602053 GRIN2BQ13224 1484 aa12.83□□□□□ -0.36
C3-217ENST00000602053 IGF1RP08069 1367 aa12.82□□□□□ -0.36
C3-217ENST00000602053 RAPGEF2Q9Y4G8 1499 aa12.81□□□□□ -0.36
C3-217ENST00000602053 CTTNBP2Q8WZ74 1663 aa12.8□□□□□ -0.36
C3-217ENST00000602053 TDRD9Q8NDG6 1382 aaKnown RBP12.8□□□□□ -0.36
C3-217ENST00000602053 TNIKQ9UKE5 1360 aa12.8□□□□□ -0.36
C3-217ENST00000602053 ZNF608Q9ULD9 1512 aaPredicted RBP12.79□□□□□ -0.36
C3-217ENST00000602053 CARMIL1Q5VZK9 1371 aa12.79□□□□□ -0.36
C3-217ENST00000602053 MAGI1Q96QZ7 1491 aaPredicted RBP12.78□□□□□ -0.36
C3-217ENST00000602053 FHAD1B1AJZ9 1412 aa12.76□□□□□ -0.37
C3-217ENST00000602053 AQRO60306 1485 aaKnown RBP eCLIP12.76□□□□□ -0.37
C3-217ENST00000602053 LOC105371045A0A1W2PR82 267 aa12.75□□□□□ -0.37
C3-217ENST00000602053 SNAPC4Q5SXM2 1469 aa12.72□□□□□ -0.37
C3-217ENST00000602053 CEP162Q5TB80 1403 aa12.71□□□□□ -0.38
C3-217ENST00000602053 SYNJ2O15056 1496 aa12.7□□□□□ -0.38
C3-217ENST00000602053 UBTFP17480 764 aaKnown RBP12.68□□□□□ -0.38
C3-217ENST00000602053 GRIN2AQ12879 1464 aa12.67□□□□□ -0.38
C3-217ENST00000602053 EFCAB5A4FU69 1503 aa12.66□□□□□ -0.38
C3-217ENST00000602053 CLIP1P30622 1438 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms