RNA–Protein interactions for RNA: ENST00000601897.1

RAB11B-205, Transcript of RAB11B, member RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAB11B, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11B-205ENST00000601897 NISCHQ9Y2I1 1504 aa31.65■■■□□ 2.66
RAB11B-205ENST00000601897 CCDC180Q9P1Z9 1646 aa28.29■■■□□ 2.12
RAB11B-205ENST00000601897 ABCC9O60706 1549 aa28.11■■■□□ 2.09
RAB11B-205ENST00000601897 DCAF8L2P0C7V8 631 aa26.89■■□□□ 1.9
RAB11B-205ENST00000601897 RB1CC1Q8TDY2 1594 aa26.87■■□□□ 1.89
RAB11B-205ENST00000601897 NACADO15069 1562 aa26.71■■□□□ 1.87
RAB11B-205ENST00000601897 MYO15BQ96JP2 1530 aa26.34■■□□□ 1.81
RAB11B-205ENST00000601897 ZCCHC6Q5VYS8 1495 aaKnown RBP26.27■■□□□ 1.8
RAB11B-205ENST00000601897 PABPN1Q86U42 306 aaKnown RBP eCLIP26.24■■□□□ 1.79
RAB11B-205ENST00000601897 UNC13AQ9UPW8 1703 aa26.17■■□□□ 1.78
RAB11B-205ENST00000601897 DCAF1Q9Y4B6 1507 aa26.12■■□□□ 1.77
RAB11B-205ENST00000601897 DNAJC5BQ9UF47 199 aa25.98■■□□□ 1.75
RAB11B-205ENST00000601897 BICRAQ9NZM4 1560 aa25.92■■□□□ 1.74
RAB11B-205ENST00000601897 SCRIBQ14160 1630 aa25.88■■□□□ 1.73
RAB11B-205ENST00000601897 SHROOM4Q9ULL8 1493 aa25.67■■□□□ 1.7
RAB11B-205ENST00000601897 EIF4G1Q04637 1599 aaKnown RBP25.35■■□□□ 1.65
RAB11B-205ENST00000601897 CC2D2AQ9P2K1 1620 aa25.35■■□□□ 1.65
RAB11B-205ENST00000601897 CECR2Q9BXF3 1484 aa25.28■■□□□ 1.64
RAB11B-205ENST00000601897 SMARCA4P51532 1647 aa24.65■■□□□ 1.54
RAB11B-205ENST00000601897 NCAPD3P42695 1498 aa24.61■■□□□ 1.53
RAB11B-205ENST00000601897 BAZ1AQ9NRL2 1556 aaPredicted RBP24.61■■□□□ 1.53
RAB11B-205ENST00000601897 SMARCA2P51531 1590 aa24.6■■□□□ 1.53
RAB11B-205ENST00000601897 ATAD2BQ9ULI0 1458 aa24.59■■□□□ 1.53
RAB11B-205ENST00000601897 HMGXB3Q12766 1538 aa24.47■■□□□ 1.51
RAB11B-205ENST00000601897 BAZ1BQ9UIG0 1483 aaKnown RBP24.46■■□□□ 1.51
RAB11B-205ENST00000601897 MROH2BQ7Z745 1585 aa24.38■■□□□ 1.49
RAB11B-205ENST00000601897 ERCC6Q03468 1493 aa24.34■■□□□ 1.49
RAB11B-205ENST00000601897 PEG3Q9GZU2 1588 aa24.33■■□□□ 1.49
RAB11B-205ENST00000601897 NESP48681 1621 aa24.16■■□□□ 1.46
RAB11B-205ENST00000601897 WIZO95785 1651 aa24.15■■□□□ 1.46
RAB11B-205ENST00000601897 CUX2O14529 1486 aa24.08■■□□□ 1.45
RAB11B-205ENST00000601897 LAMC3Q9Y6N6 1575 aa24.07■■□□□ 1.44
RAB11B-205ENST00000601897 RSF1Q96T23 1441 aaPredicted RBP23.99■■□□□ 1.43
RAB11B-205ENST00000601897 PDS5BQ9NTI5 1447 aa23.98■■□□□ 1.43
RAB11B-205ENST00000601897 CADPSQ9ULU8 1353 aa23.93■■□□□ 1.42
RAB11B-205ENST00000601897 KIF21AQ7Z4S6 1674 aa23.88■■□□□ 1.41
RAB11B-205ENST00000601897 TOP2AP11388 1531 aaKnown RBP23.86■■□□□ 1.41
RAB11B-205ENST00000601897 THOC2Q8NI27 1593 aaKnown RBP23.82■■□□□ 1.4
RAB11B-205ENST00000601897 DNAJC5Q9H3Z4 198 aa23.73■■□□□ 1.39
RAB11B-205ENST00000601897 MRC2Q9UBG0 1479 aa23.71■■□□□ 1.39
RAB11B-205ENST00000601897 CEP164Q9UPV0 1460 aa23.71■■□□□ 1.39
RAB11B-205ENST00000601897 FANCD2Q9BXW9 1451 aa23.68■■□□□ 1.38
RAB11B-205ENST00000601897 CFTRP13569 1480 aa23.67■■□□□ 1.38
RAB11B-205ENST00000601897 WDR62O43379 1518 aa23.59■■□□□ 1.37
RAB11B-205ENST00000601897 CCDC88BA6NC98 1476 aa23.58■■□□□ 1.37
RAB11B-205ENST00000601897 PRDM2Q13029 1718 aa23.5■■□□□ 1.35
RAB11B-205ENST00000601897 URB2Q14146 1524 aaKnown RBP23.4■■□□□ 1.34
RAB11B-205ENST00000601897 SUPT5HO00267 1087 aaKnown RBP23.36■■□□□ 1.33
RAB11B-205ENST00000601897 ABCC8Q09428 1581 aa23.27■■□□□ 1.32
RAB11B-205ENST00000601897 TOPBP1Q92547 1522 aa23.23■■□□□ 1.31
RAB11B-205ENST00000601897 IFT140Q96RY7 1462 aa23.2■■□□□ 1.3
RAB11B-205ENST00000601897 DNMBPQ6XZF7 1577 aa23.18■■□□□ 1.3
RAB11B-205ENST00000601897 OSCARQ8IYS5 282 aa23.12■■□□□ 1.29
RAB11B-205ENST00000601897 ZNF608Q9ULD9 1512 aaPredicted RBP23.08■■□□□ 1.28
RAB11B-205ENST00000601897 POLA1P09884 1462 aaPredicted RBP23■■□□□ 1.27
RAB11B-205ENST00000601897 EIF4G3O43432 1585 aaKnown RBP22.99■■□□□ 1.27
RAB11B-205ENST00000601897 TRIM41Q8WV44 630 aa22.99■■□□□ 1.27
RAB11B-205ENST00000601897 SOGA1O94964 1423 aa22.98■■□□□ 1.27
RAB11B-205ENST00000601897 AQRO60306 1485 aaKnown RBP eCLIP22.95■■□□□ 1.267e-12■■■□□ 15.7
RAB11B-205ENST00000601897 TARBP1Q13395 1621 aaKnown RBP22.95■■□□□ 1.26
RAB11B-205ENST00000601897 FGD5Q6ZNL6 1462 aa22.93■■□□□ 1.26
RAB11B-205ENST00000601897 RAD54L2Q9Y4B4 1467 aa22.93■■□□□ 1.26
RAB11B-205ENST00000601897 FBLN2P98095 1184 aa22.93■■□□□ 1.26
RAB11B-205ENST00000601897 CUX1P39880 1505 aa22.9■■□□□ 1.26
RAB11B-205ENST00000601897 TDRD9Q8NDG6 1382 aaKnown RBP22.88■■□□□ 1.25
RAB11B-205ENST00000601897 CHD1O14646 1710 aa22.79■■□□□ 1.24
RAB11B-205ENST00000601897 WDR97A6NE52 1622 aa22.79■■□□□ 1.24
RAB11B-205ENST00000601897 CHMP7Q8WUX9 453 aaPredicted RBP22.76■■□□□ 1.23
RAB11B-205ENST00000601897 SNAPC4Q5SXM2 1469 aa22.73■■□□□ 1.23
RAB11B-205ENST00000601897 GRIN2BQ13224 1484 aa22.73■■□□□ 1.23
RAB11B-205ENST00000601897 WRNQ14191 1432 aaPredicted RBP eCLIP22.71■■□□□ 1.23
RAB11B-205ENST00000601897 RIMBP3CA6NJZ7 1639 aa22.69■■□□□ 1.22
RAB11B-205ENST00000601897 RIMBP3BA6NNM3 1639 aa22.69■■□□□ 1.22
RAB11B-205ENST00000601897 RIMBP3Q9UFD9 1639 aa22.69■■□□□ 1.22
RAB11B-205ENST00000601897 GAPVD1Q14C86 1478 aa22.69■■□□□ 1.22
RAB11B-205ENST00000601897 MAGI1Q96QZ7 1491 aaPredicted RBP22.68■■□□□ 1.22
RAB11B-205ENST00000601897 ABCA10Q8WWZ4 1543 aa22.66■■□□□ 1.22
RAB11B-205ENST00000601897 ARHGEF11O15085 1522 aa22.65■■□□□ 1.22
RAB11B-205ENST00000601897 PBRM1Q86U86 1689 aa22.65■■□□□ 1.22
RAB11B-205ENST00000601897 TOP2BQ02880 1626 aa22.64■■□□□ 1.21
RAB11B-205ENST00000601897 BIVM-ERCC5R4GMW8 1640 aa22.62■■□□□ 1.21
RAB11B-205ENST00000601897 SYNJ2O15056 1496 aa22.6■■□□□ 1.21
RAB11B-205ENST00000601897 SYNJ1O43426 1573 aa22.6■■□□□ 1.21
RAB11B-205ENST00000601897 CYB5RLQ6IPT4 315 aa22.58■■□□□ 1.21
RAB11B-205ENST00000601897 ABCA5Q8WWZ7 1642 aa22.57■■□□□ 1.2
RAB11B-205ENST00000601897 CLASP1Q7Z460 1538 aa22.46■■□□□ 1.19
RAB11B-205ENST00000601897 GRIN2AQ12879 1464 aa22.41■■□□□ 1.18
RAB11B-205ENST00000601897 ARAP1Q96P48 1450 aa22.41■■□□□ 1.18
RAB11B-205ENST00000601897 ADAMTS12P58397 1594 aa22.41■■□□□ 1.18
RAB11B-205ENST00000601897 FHAD1B1AJZ9 1412 aa22.4■■□□□ 1.18
RAB11B-205ENST00000601897 ERICH3Q5RHP9 1530 aa22.4■■□□□ 1.18
RAB11B-205ENST00000601897 TRHP20396 242 aaPredicted RBP22.35■■□□□ 1.17
RAB11B-205ENST00000601897 KIF27Q86VH2 1401 aa22.3■■□□□ 1.16
RAB11B-205ENST00000601897 CEP170Q5SW79 1584 aa22.28■■□□□ 1.16
RAB11B-205ENST00000601897 NUP160Q12769 1436 aa22.27■■□□□ 1.16
RAB11B-205ENST00000601897 CUL7Q14999 1698 aa22.17■■□□□ 1.14
RAB11B-205ENST00000601897 IGF1RP08069 1367 aa22.15■■□□□ 1.14
RAB11B-205ENST00000601897 JPH4Q96JJ6 628 aa22.15■■□□□ 1.14
RAB11B-205ENST00000601897 PRG4Q92954 1404 aaPredicted RBP22.14■■□□□ 1.13
RAB11B-205ENST00000601897 ERCC6L2Q5T890 1561 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms