RNA–Protein interactions for RNA: ENST00000601853.5

FARP1-237, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 749 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-237ENST00000601853 NISCHQ9Y2I1 1504 aa38.85■■■■□ 3.81
FARP1-237ENST00000601853 ABCC9O60706 1549 aa35.62■■■■□ 3.29
FARP1-237ENST00000601853 CCDC180Q9P1Z9 1646 aa35.05■■■■□ 3.2
FARP1-237ENST00000601853 DNAJC5BQ9UF47 199 aa34.03■■■■□ 3.04
FARP1-237ENST00000601853 RB1CC1Q8TDY2 1594 aa33.67■■■□□ 2.98
FARP1-237ENST00000601853 NACADO15069 1562 aa33.33■■■□□ 2.93
FARP1-237ENST00000601853 PABPN1Q86U42 306 aaKnown RBP eCLIP33.13■■■□□ 2.89
FARP1-237ENST00000601853 DCAF8L2P0C7V8 631 aa33.06■■■□□ 2.88
FARP1-237ENST00000601853 UNC13AQ9UPW8 1703 aa32.84■■■□□ 2.85
FARP1-237ENST00000601853 BICRAQ9NZM4 1560 aa32.73■■■□□ 2.83
FARP1-237ENST00000601853 MYO15BQ96JP2 1530 aa32.72■■■□□ 2.83
FARP1-237ENST00000601853 SHROOM4Q9ULL8 1493 aa32.24■■■□□ 2.75
FARP1-237ENST00000601853 CECR2Q9BXF3 1484 aa32.17■■■□□ 2.74
FARP1-237ENST00000601853 CC2D2AQ9P2K1 1620 aa32.15■■■□□ 2.74
FARP1-237ENST00000601853 DCAF1Q9Y4B6 1507 aa32.08■■■□□ 2.73
FARP1-237ENST00000601853 ZCCHC6Q5VYS8 1495 aaKnown RBP32.05■■■□□ 2.72
FARP1-237ENST00000601853 EIF4G1Q04637 1599 aaKnown RBP31.94■■■□□ 2.7
FARP1-237ENST00000601853 SCRIBQ14160 1630 aa31.87■■■□□ 2.69
FARP1-237ENST00000601853 DNAJC5Q9H3Z4 198 aa31.68■■■□□ 2.66
FARP1-237ENST00000601853 CUX2O14529 1486 aa30.96■■■□□ 2.55
FARP1-237ENST00000601853 NCAPD3P42695 1498 aa30.82■■■□□ 2.53
FARP1-237ENST00000601853 ERCC6Q03468 1493 aa30.79■■■□□ 2.52
FARP1-237ENST00000601853 ATAD2BQ9ULI0 1458 aa30.61■■■□□ 2.49
FARP1-237ENST00000601853 HMGXB3Q12766 1538 aa30.47■■■□□ 2.47
FARP1-237ENST00000601853 SMARCA2P51531 1590 aa30.47■■■□□ 2.47
FARP1-237ENST00000601853 NESP48681 1621 aa30.45■■■□□ 2.47
FARP1-237ENST00000601853 SMARCA4P51532 1647 aa30.39■■■□□ 2.46
FARP1-237ENST00000601853 BAZ1BQ9UIG0 1483 aaKnown RBP30.25■■■□□ 2.43
FARP1-237ENST00000601853 THOC2Q8NI27 1593 aaKnown RBP30.21■■■□□ 2.43
FARP1-237ENST00000601853 BAZ1AQ9NRL2 1556 aaPredicted RBP30.17■■■□□ 2.42
FARP1-237ENST00000601853 LAMC3Q9Y6N6 1575 aa30.15■■■□□ 2.42
FARP1-237ENST00000601853 PEG3Q9GZU2 1588 aa30.14■■■□□ 2.42
FARP1-237ENST00000601853 PDS5BQ9NTI5 1447 aa30.04■■■□□ 2.4
FARP1-237ENST00000601853 KIF21AQ7Z4S6 1674 aa29.98■■■□□ 2.39
FARP1-237ENST00000601853 TRIM41Q8WV44 630 aa29.97■■■□□ 2.39
FARP1-237ENST00000601853 MROH2BQ7Z745 1585 aa29.92■■■□□ 2.38
FARP1-237ENST00000601853 CADPSQ9ULU8 1353 aa29.85■■■□□ 2.37
FARP1-237ENST00000601853 MRC2Q9UBG0 1479 aa29.77■■■□□ 2.36
FARP1-237ENST00000601853 WDR62O43379 1518 aa29.71■■■□□ 2.35
FARP1-237ENST00000601853 OSCARQ8IYS5 282 aa29.53■■■□□ 2.32
FARP1-237ENST00000601853 CEP164Q9UPV0 1460 aa29.53■■■□□ 2.32
FARP1-237ENST00000601853 WIZO95785 1651 aa29.5■■■□□ 2.31
FARP1-237ENST00000601853 FANCD2Q9BXW9 1451 aa29.47■■■□□ 2.31
FARP1-237ENST00000601853 CFTRP13569 1480 aa29.38■■■□□ 2.29
FARP1-237ENST00000601853 URB2Q14146 1524 aaKnown RBP29.26■■■□□ 2.27
FARP1-237ENST00000601853 RSF1Q96T23 1441 aaPredicted RBP29.13■■■□□ 2.25
FARP1-237ENST00000601853 TOP2AP11388 1531 aaKnown RBP29.1■■■□□ 2.25
FARP1-237ENST00000601853 RIMBP3CA6NJZ7 1639 aa29.09■■■□□ 2.25
FARP1-237ENST00000601853 RIMBP3BA6NNM3 1639 aa29.09■■■□□ 2.25
FARP1-237ENST00000601853 RIMBP3Q9UFD9 1639 aa29.09■■■□□ 2.25
FARP1-237ENST00000601853 IFT140Q96RY7 1462 aa28.99■■■□□ 2.23
FARP1-237ENST00000601853 ZNF608Q9ULD9 1512 aaPredicted RBP28.99■■■□□ 2.23
FARP1-237ENST00000601853 ARHGEF11O15085 1522 aa28.97■■■□□ 2.23
FARP1-237ENST00000601853 PRDM2Q13029 1718 aa28.91■■■□□ 2.22
FARP1-237ENST00000601853 CYB5RLQ6IPT4 315 aa28.85■■■□□ 2.21
FARP1-237ENST00000601853 TOPBP1Q92547 1522 aa28.84■■■□□ 2.21
FARP1-237ENST00000601853 CCDC88BA6NC98 1476 aa28.82■■■□□ 2.2
FARP1-237ENST00000601853 ABCC8Q09428 1581 aa28.78■■■□□ 2.2
FARP1-237ENST00000601853 EIF4G3O43432 1585 aaKnown RBP28.74■■■□□ 2.19
FARP1-237ENST00000601853 TRHP20396 242 aaPredicted RBP28.69■■■□□ 2.18
FARP1-237ENST00000601853 AQRO60306 1485 aaKnown RBP eCLIP28.67■■■□□ 2.182e-8■■□□□ 13.4
FARP1-237ENST00000601853 DNMBPQ6XZF7 1577 aa28.67■■■□□ 2.18
FARP1-237ENST00000601853 ARAP1Q96P48 1450 aa28.65■■■□□ 2.18
FARP1-237ENST00000601853 TARBP1Q13395 1621 aaKnown RBP28.62■■■□□ 2.17
FARP1-237ENST00000601853 CHD1O14646 1710 aa28.62■■■□□ 2.17
FARP1-237ENST00000601853 FBLN2P98095 1184 aa28.61■■■□□ 2.17
FARP1-237ENST00000601853 POLA1P09884 1462 aaPredicted RBP28.51■■■□□ 2.15
FARP1-237ENST00000601853 TDRD9Q8NDG6 1382 aaKnown RBP28.43■■■□□ 2.14
FARP1-237ENST00000601853 RAD54L2Q9Y4B4 1467 aa28.42■■■□□ 2.14
FARP1-237ENST00000601853 SOGA1O94964 1423 aa28.41■■■□□ 2.14
FARP1-237ENST00000601853 CLASP1Q7Z460 1538 aa28.33■■■□□ 2.13
FARP1-237ENST00000601853 CHMP7Q8WUX9 453 aaPredicted RBP28.33■■■□□ 2.13
FARP1-237ENST00000601853 SNAPC4Q5SXM2 1469 aa28.32■■■□□ 2.12
FARP1-237ENST00000601853 WDR97A6NE52 1622 aa28.29■■■□□ 2.12
FARP1-237ENST00000601853 AEBP2Q6ZN18 517 aaPredicted RBP28.27■■■□□ 2.12
FARP1-237ENST00000601853 MAGI1Q96QZ7 1491 aaPredicted RBP28.26■■■□□ 2.11
FARP1-237ENST00000601853 SYNJ1O43426 1573 aa28.25■■■□□ 2.11
FARP1-237ENST00000601853 FGD5Q6ZNL6 1462 aa28.24■■■□□ 2.11
FARP1-237ENST00000601853 GRIN2BQ13224 1484 aa28.21■■■□□ 2.11
FARP1-237ENST00000601853 SYNJ2O15056 1496 aa28.18■■■□□ 2.1
FARP1-237ENST00000601853 CUX1P39880 1505 aa28.13■■■□□ 2.09
FARP1-237ENST00000601853 GAPVD1Q14C86 1478 aa28.09■■■□□ 2.09
FARP1-237ENST00000601853 PBRM1Q86U86 1689 aa27.96■■■□□ 2.07
FARP1-237ENST00000601853 ABCA10Q8WWZ4 1543 aa27.92■■■□□ 2.06
FARP1-237ENST00000601853 ABCA5Q8WWZ7 1642 aa27.87■■■□□ 2.05
FARP1-237ENST00000601853 ERCC6L2Q5T890 1561 aa27.84■■■□□ 2.05
FARP1-237ENST00000601853 GRIN2AQ12879 1464 aa27.83■■■□□ 2.04
FARP1-237ENST00000601853 NUP160Q12769 1436 aa27.78■■■□□ 2.04
FARP1-237ENST00000601853 CEP170Q5SW79 1584 aa27.77■■■□□ 2.04
FARP1-237ENST00000601853 WRNQ14191 1432 aaPredicted RBP eCLIP27.71■■■□□ 2.03
FARP1-237ENST00000601853 ADAMTS12P58397 1594 aa27.69■■■□□ 2.02
FARP1-237ENST00000601853 SHROOM2Q13796 1616 aa27.68■■■□□ 2.02
FARP1-237ENST00000601853 FHAD1B1AJZ9 1412 aa27.67■■■□□ 2.02
FARP1-237ENST00000601853 KIF13AQ9H1H9 1805 aa27.6■■■□□ 2.01
FARP1-237ENST00000601853 PRG4Q92954 1404 aaPredicted RBP27.56■■■□□ 2
FARP1-237ENST00000601853 JPH4Q96JJ6 628 aa27.55■■■□□ 2
FARP1-237ENST00000601853 ERICH3Q5RHP9 1530 aa27.55■■■□□ 2
FARP1-237ENST00000601853 TOP2BQ02880 1626 aa27.52■■■□□ 2
FARP1-237ENST00000601853 BIVM-ERCC5R4GMW8 1640 aa27.51■■□□□ 1.99
FARP1-237ENST00000601853 FAM69CQ0P6D2 419 aa27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms