RNA–Protein interactions for RNA: ENST00000601778.5

ECH1-216, Transcript of enoyl-CoA hydratase 1, humanhuman

TSL 5

Gene ECH1, Length 799 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECH1-216ENST00000601778 NISCHQ9Y2I1 1504 aa35.27■■■■□ 3.24
ECH1-216ENST00000601778 CCDC180Q9P1Z9 1646 aa31.29■■■□□ 2.6
ECH1-216ENST00000601778 ABCC9O60706 1549 aa30.75■■■□□ 2.51
ECH1-216ENST00000601778 RB1CC1Q8TDY2 1594 aa29.44■■■□□ 2.3
ECH1-216ENST00000601778 ZCCHC6Q5VYS8 1495 aaKnown RBP29.42■■■□□ 2.3
ECH1-216ENST00000601778 DCAF8L2P0C7V8 631 aa29.41■■■□□ 2.3
ECH1-216ENST00000601778 NACADO15069 1562 aa29.4■■■□□ 2.3
ECH1-216ENST00000601778 MYO15BQ96JP2 1530 aa29.21■■■□□ 2.27
ECH1-216ENST00000601778 DCAF1Q9Y4B6 1507 aa29.11■■■□□ 2.25
ECH1-216ENST00000601778 UNC13AQ9UPW8 1703 aa28.91■■■□□ 2.22
ECH1-216ENST00000601778 PABPN1Q86U42 306 aaKnown RBP eCLIP28.74■■■□□ 2.19
ECH1-216ENST00000601778 BICRAQ9NZM4 1560 aa28.73■■■□□ 2.19
ECH1-216ENST00000601778 SCRIBQ14160 1630 aa28.68■■■□□ 2.18
ECH1-216ENST00000601778 DNAJC5BQ9UF47 199 aa28.33■■■□□ 2.13
ECH1-216ENST00000601778 SHROOM4Q9ULL8 1493 aa28.2■■■□□ 2.1
ECH1-216ENST00000601778 EIF4G1Q04637 1599 aaKnown RBP27.9■■■□□ 2.06
ECH1-216ENST00000601778 CC2D2AQ9P2K1 1620 aa27.79■■■□□ 2.04
ECH1-216ENST00000601778 CECR2Q9BXF3 1484 aa27.59■■■□□ 2.01
ECH1-216ENST00000601778 SMARCA4P51532 1647 aa27.38■■□□□ 1.97
ECH1-216ENST00000601778 BAZ1AQ9NRL2 1556 aaPredicted RBP27.28■■□□□ 1.96
ECH1-216ENST00000601778 MROH2BQ7Z745 1585 aa27.26■■□□□ 1.96
ECH1-216ENST00000601778 ATAD2BQ9ULI0 1458 aa27.24■■□□□ 1.95
ECH1-216ENST00000601778 NCAPD3P42695 1498 aa27.18■■□□□ 1.94
ECH1-216ENST00000601778 SMARCA2P51531 1590 aa27.11■■□□□ 1.93
ECH1-216ENST00000601778 PEG3Q9GZU2 1588 aa27.09■■□□□ 1.93
ECH1-216ENST00000601778 HMGXB3Q12766 1538 aa27.05■■□□□ 1.92
ECH1-216ENST00000601778 BAZ1BQ9UIG0 1483 aaKnown RBP26.97■■□□□ 1.91
ECH1-216ENST00000601778 WIZO95785 1651 aa26.95■■□□□ 1.91
ECH1-216ENST00000601778 RSF1Q96T23 1441 aaPredicted RBP26.91■■□□□ 1.9
ECH1-216ENST00000601778 NESP48681 1621 aa26.67■■□□□ 1.86
ECH1-216ENST00000601778 TOP2AP11388 1531 aaKnown RBP26.6■■□□□ 1.85
ECH1-216ENST00000601778 LAMC3Q9Y6N6 1575 aa26.43■■□□□ 1.82
ECH1-216ENST00000601778 ERCC6Q03468 1493 aa26.39■■□□□ 1.82
ECH1-216ENST00000601778 CADPSQ9ULU8 1353 aa26.38■■□□□ 1.81
ECH1-216ENST00000601778 CCDC88BA6NC98 1476 aa26.32■■□□□ 1.8
ECH1-216ENST00000601778 KIF21AQ7Z4S6 1674 aa26.29■■□□□ 1.8
ECH1-216ENST00000601778 CFTRP13569 1480 aa26.25■■□□□ 1.79
ECH1-216ENST00000601778 THOC2Q8NI27 1593 aaKnown RBP26.22■■□□□ 1.79
ECH1-216ENST00000601778 PDS5BQ9NTI5 1447 aa26.21■■□□□ 1.79
ECH1-216ENST00000601778 SUPT5HO00267 1087 aaKnown RBP26.18■■□□□ 1.78
ECH1-216ENST00000601778 CUX2O14529 1486 aa26.11■■□□□ 1.77
ECH1-216ENST00000601778 FANCD2Q9BXW9 1451 aa26.11■■□□□ 1.77
ECH1-216ENST00000601778 CEP164Q9UPV0 1460 aa26.04■■□□□ 1.76
ECH1-216ENST00000601778 MRC2Q9UBG0 1479 aa26.03■■□□□ 1.76
ECH1-216ENST00000601778 PRDM2Q13029 1718 aa26■■□□□ 1.75
ECH1-216ENST00000601778 WDR62O43379 1518 aa25.97■■□□□ 1.75
ECH1-216ENST00000601778 URB2Q14146 1524 aaKnown RBP25.92■■□□□ 1.74
ECH1-216ENST00000601778 TOPBP1Q92547 1522 aa25.71■■□□□ 1.71
ECH1-216ENST00000601778 DNMBPQ6XZF7 1577 aa25.65■■□□□ 1.7
ECH1-216ENST00000601778 CUX1P39880 1505 aa25.57■■□□□ 1.68
ECH1-216ENST00000601778 ABCC8Q09428 1581 aa25.53■■□□□ 1.68
ECH1-216ENST00000601778 POLA1P09884 1462 aaPredicted RBP25.51■■□□□ 1.67
ECH1-216ENST00000601778 ZNF608Q9ULD9 1512 aaPredicted RBP25.51■■□□□ 1.67
ECH1-216ENST00000601778 IFT140Q96RY7 1462 aa25.48■■□□□ 1.67
ECH1-216ENST00000601778 TARBP1Q13395 1621 aaKnown RBP25.46■■□□□ 1.67
ECH1-216ENST00000601778 FGD5Q6ZNL6 1462 aa25.44■■□□□ 1.66
ECH1-216ENST00000601778 RAD54L2Q9Y4B4 1467 aa25.44■■□□□ 1.66
ECH1-216ENST00000601778 SYNJ1O43426 1573 aa25.35■■□□□ 1.65
ECH1-216ENST00000601778 EIF4G3O43432 1585 aaKnown RBP25.35■■□□□ 1.65
ECH1-216ENST00000601778 DNAJC5Q9H3Z4 198 aa25.35■■□□□ 1.65
ECH1-216ENST00000601778 SOGA1O94964 1423 aa25.33■■□□□ 1.65
ECH1-216ENST00000601778 AQRO60306 1485 aaKnown RBP eCLIP25.32■■□□□ 1.645e-7■■■■■ 59.6
ECH1-216ENST00000601778 WRNQ14191 1432 aaPredicted RBP eCLIP25.31■■□□□ 1.64
ECH1-216ENST00000601778 BIVM-ERCC5R4GMW8 1640 aa25.28■■□□□ 1.64
ECH1-216ENST00000601778 TOP2BQ02880 1626 aa25.27■■□□□ 1.64
ECH1-216ENST00000601778 TDRD9Q8NDG6 1382 aaKnown RBP25.26■■□□□ 1.63
ECH1-216ENST00000601778 WDR97A6NE52 1622 aa25.26■■□□□ 1.63
ECH1-216ENST00000601778 ABCA10Q8WWZ4 1543 aa25.15■■□□□ 1.62
ECH1-216ENST00000601778 ABCA5Q8WWZ7 1642 aa25.1■■□□□ 1.61
ECH1-216ENST00000601778 SNAPC4Q5SXM2 1469 aa25.07■■□□□ 1.6
ECH1-216ENST00000601778 GAPVD1Q14C86 1478 aa25.05■■□□□ 1.6
ECH1-216ENST00000601778 PBRM1Q86U86 1689 aa25.03■■□□□ 1.6
ECH1-216ENST00000601778 CHD1O14646 1710 aa25.03■■□□□ 1.6
ECH1-216ENST00000601778 GRIN2BQ13224 1484 aa25.02■■□□□ 1.6
ECH1-216ENST00000601778 OSCARQ8IYS5 282 aa24.99■■□□□ 1.59
ECH1-216ENST00000601778 MAGI1Q96QZ7 1491 aaPredicted RBP24.95■■□□□ 1.58
ECH1-216ENST00000601778 FBLN2P98095 1184 aa24.92■■□□□ 1.58
ECH1-216ENST00000601778 SYNJ2O15056 1496 aa24.88■■□□□ 1.57
ECH1-216ENST00000601778 ADAMTS12P58397 1594 aa24.86■■□□□ 1.57
ECH1-216ENST00000601778 ERICH3Q5RHP9 1530 aa24.81■■□□□ 1.56
ECH1-216ENST00000601778 CHMP7Q8WUX9 453 aaPredicted RBP24.81■■□□□ 1.56
ECH1-216ENST00000601778 CLASP1Q7Z460 1538 aa24.77■■□□□ 1.56
ECH1-216ENST00000601778 GRIN2AQ12879 1464 aa24.75■■□□□ 1.55
ECH1-216ENST00000601778 FHAD1B1AJZ9 1412 aa24.74■■□□□ 1.55
ECH1-216ENST00000601778 RIMBP3CA6NJZ7 1639 aa24.72■■□□□ 1.55
ECH1-216ENST00000601778 RIMBP3BA6NNM3 1639 aa24.72■■□□□ 1.55
ECH1-216ENST00000601778 RIMBP3Q9UFD9 1639 aa24.72■■□□□ 1.55
ECH1-216ENST00000601778 KIF27Q86VH2 1401 aa24.72■■□□□ 1.55
ECH1-216ENST00000601778 IGF1RP08069 1367 aa24.71■■□□□ 1.55
ECH1-216ENST00000601778 ARHGEF11O15085 1522 aa24.71■■□□□ 1.55
ECH1-216ENST00000601778 RUSC2Q8N2Y8 1516 aa24.71■■□□□ 1.55
ECH1-216ENST00000601778 CEP170Q5SW79 1584 aa24.69■■□□□ 1.54
ECH1-216ENST00000601778 NUP160Q12769 1436 aa24.65■■□□□ 1.54
ECH1-216ENST00000601778 TRIM41Q8WV44 630 aa24.64■■□□□ 1.54
ECH1-216ENST00000601778 CUL7Q14999 1698 aa24.57■■□□□ 1.52
ECH1-216ENST00000601778 ARAP1Q96P48 1450 aa24.55■■□□□ 1.52
ECH1-216ENST00000601778 ERCC6L2Q5T890 1561 aa24.53■■□□□ 1.52
ECH1-216ENST00000601778 CARMIL1Q5VZK9 1371 aa24.52■■□□□ 1.52
ECH1-216ENST00000601778 SHROOM2Q13796 1616 aa24.47■■□□□ 1.51
ECH1-216ENST00000601778 CHIC1Q5VXU3 224 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms