RNA–Protein interactions for RNA: ENST00000601763.1

CCDC61-208, Transcript of coiled-coil domain containing 61, humanhuman

TSL 3

Gene CCDC61, Length 291 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-208ENST00000601763 NISCHQ9Y2I1 1504 aa39.19■■■■□ 3.86
CCDC61-208ENST00000601763 CCDC180Q9P1Z9 1646 aa34.75■■■■□ 3.15
CCDC61-208ENST00000601763 ABCC9O60706 1549 aa34.18■■■■□ 3.06
CCDC61-208ENST00000601763 DCAF8L2P0C7V8 631 aa32.8■■■□□ 2.84
CCDC61-208ENST00000601763 RB1CC1Q8TDY2 1594 aa32.71■■■□□ 2.83
CCDC61-208ENST00000601763 NACADO15069 1562 aa32.66■■■□□ 2.82
CCDC61-208ENST00000601763 ZCCHC6Q5VYS8 1495 aaKnown RBP32.65■■■□□ 2.82
CCDC61-208ENST00000601763 MYO15BQ96JP2 1530 aa32.42■■■□□ 2.78
CCDC61-208ENST00000601763 DCAF1Q9Y4B6 1507 aa32.32■■■□□ 2.76
CCDC61-208ENST00000601763 UNC13AQ9UPW8 1703 aa32.12■■■□□ 2.73
CCDC61-208ENST00000601763 PABPN1Q86U42 306 aaKnown RBP eCLIP31.97■■■□□ 2.71
CCDC61-208ENST00000601763 BICRAQ9NZM4 1560 aa31.88■■■□□ 2.69
CCDC61-208ENST00000601763 SCRIBQ14160 1630 aa31.86■■■□□ 2.69
CCDC61-208ENST00000601763 DNAJC5BQ9UF47 199 aa31.48■■■□□ 2.63
CCDC61-208ENST00000601763 SHROOM4Q9ULL8 1493 aa31.27■■■□□ 2.6
CCDC61-208ENST00000601763 EIF4G1Q04637 1599 aaKnown RBP30.96■■■□□ 2.55
CCDC61-208ENST00000601763 CC2D2AQ9P2K1 1620 aa30.87■■■□□ 2.53
CCDC61-208ENST00000601763 CECR2Q9BXF3 1484 aa30.65■■■□□ 2.5
CCDC61-208ENST00000601763 SMARCA4P51532 1647 aa30.41■■■□□ 2.46
CCDC61-208ENST00000601763 BAZ1AQ9NRL2 1556 aaPredicted RBP30.31■■■□□ 2.44
CCDC61-208ENST00000601763 MROH2BQ7Z745 1585 aa30.28■■■□□ 2.44
CCDC61-208ENST00000601763 ATAD2BQ9ULI0 1458 aa30.25■■■□□ 2.43
CCDC61-208ENST00000601763 NCAPD3P42695 1498 aa30.19■■■□□ 2.42
CCDC61-208ENST00000601763 SMARCA2P51531 1590 aa30.13■■■□□ 2.41
CCDC61-208ENST00000601763 PEG3Q9GZU2 1588 aa30.07■■■□□ 2.4
CCDC61-208ENST00000601763 HMGXB3Q12766 1538 aa30.01■■■□□ 2.4
CCDC61-208ENST00000601763 BAZ1BQ9UIG0 1483 aaKnown RBP29.97■■■□□ 2.39
CCDC61-208ENST00000601763 WIZO95785 1651 aa29.96■■■□□ 2.39
CCDC61-208ENST00000601763 RSF1Q96T23 1441 aaPredicted RBP29.9■■■□□ 2.38
CCDC61-208ENST00000601763 NESP48681 1621 aa29.62■■■□□ 2.33
CCDC61-208ENST00000601763 TOP2AP11388 1531 aaKnown RBP29.55■■■□□ 2.32
CCDC61-208ENST00000601763 LAMC3Q9Y6N6 1575 aa29.36■■■□□ 2.29
CCDC61-208ENST00000601763 ERCC6Q03468 1493 aa29.34■■■□□ 2.29
CCDC61-208ENST00000601763 CADPSQ9ULU8 1353 aa29.31■■■□□ 2.28
CCDC61-208ENST00000601763 CCDC88BA6NC98 1476 aa29.26■■■□□ 2.27
CCDC61-208ENST00000601763 KIF21AQ7Z4S6 1674 aa29.21■■■□□ 2.27
CCDC61-208ENST00000601763 SUPT5HO00267 1087 aaKnown RBP29.2■■■□□ 2.26
CCDC61-208ENST00000601763 CFTRP13569 1480 aa29.16■■■□□ 2.26
CCDC61-208ENST00000601763 PDS5BQ9NTI5 1447 aa29.14■■■□□ 2.26
CCDC61-208ENST00000601763 THOC2Q8NI27 1593 aaKnown RBP29.09■■■□□ 2.25
CCDC61-208ENST00000601763 FANCD2Q9BXW9 1451 aa29.01■■■□□ 2.23
CCDC61-208ENST00000601763 CUX2O14529 1486 aa28.98■■■□□ 2.23
CCDC61-208ENST00000601763 CEP164Q9UPV0 1460 aa28.94■■■□□ 2.22
CCDC61-208ENST00000601763 MRC2Q9UBG0 1479 aa28.91■■■□□ 2.22
CCDC61-208ENST00000601763 PRDM2Q13029 1718 aa28.89■■■□□ 2.21
CCDC61-208ENST00000601763 WDR62O43379 1518 aa28.82■■■□□ 2.2
CCDC61-208ENST00000601763 URB2Q14146 1524 aaKnown RBP28.79■■■□□ 2.2
CCDC61-208ENST00000601763 TOPBP1Q92547 1522 aa28.56■■■□□ 2.16
CCDC61-208ENST00000601763 DNMBPQ6XZF7 1577 aa28.49■■■□□ 2.15
CCDC61-208ENST00000601763 ABCC8Q09428 1581 aa28.4■■■□□ 2.14
CCDC61-208ENST00000601763 CUX1P39880 1505 aa28.39■■■□□ 2.14
CCDC61-208ENST00000601763 POLA1P09884 1462 aaPredicted RBP28.33■■■□□ 2.13
CCDC61-208ENST00000601763 ZNF608Q9ULD9 1512 aaPredicted RBP28.33■■■□□ 2.13
CCDC61-208ENST00000601763 IFT140Q96RY7 1462 aa28.31■■■□□ 2.12
CCDC61-208ENST00000601763 RAD54L2Q9Y4B4 1467 aa28.27■■■□□ 2.12
CCDC61-208ENST00000601763 TARBP1Q13395 1621 aaKnown RBP28.27■■■□□ 2.12
CCDC61-208ENST00000601763 FGD5Q6ZNL6 1462 aa28.27■■■□□ 2.12
CCDC61-208ENST00000601763 SOGA1O94964 1423 aa28.18■■■□□ 2.1
CCDC61-208ENST00000601763 DNAJC5Q9H3Z4 198 aa28.18■■■□□ 2.1
CCDC61-208ENST00000601763 SYNJ1O43426 1573 aa28.16■■■□□ 2.1
CCDC61-208ENST00000601763 EIF4G3O43432 1585 aaKnown RBP28.15■■■□□ 2.1
CCDC61-208ENST00000601763 AQRO60306 1485 aaKnown RBP eCLIP28.15■■■□□ 2.1
CCDC61-208ENST00000601763 WRNQ14191 1432 aaPredicted RBP eCLIP28.14■■■□□ 2.11e-6■■■■■ 58.5
CCDC61-208ENST00000601763 TDRD9Q8NDG6 1382 aaKnown RBP28.1■■■□□ 2.09
CCDC61-208ENST00000601763 BIVM-ERCC5R4GMW8 1640 aa28.08■■■□□ 2.09
CCDC61-208ENST00000601763 TOP2BQ02880 1626 aa28.07■■■□□ 2.08
CCDC61-208ENST00000601763 WDR97A6NE52 1622 aa28.03■■■□□ 2.08
CCDC61-208ENST00000601763 ABCA10Q8WWZ4 1543 aa27.94■■■□□ 2.06
CCDC61-208ENST00000601763 ABCA5Q8WWZ7 1642 aa27.86■■■□□ 2.05
CCDC61-208ENST00000601763 GAPVD1Q14C86 1478 aa27.85■■■□□ 2.05
CCDC61-208ENST00000601763 SNAPC4Q5SXM2 1469 aa27.84■■■□□ 2.05
CCDC61-208ENST00000601763 GRIN2BQ13224 1484 aa27.82■■■□□ 2.04
CCDC61-208ENST00000601763 CHD1O14646 1710 aa27.81■■■□□ 2.04
CCDC61-208ENST00000601763 OSCARQ8IYS5 282 aa27.81■■■□□ 2.04
CCDC61-208ENST00000601763 PBRM1Q86U86 1689 aa27.81■■■□□ 2.04
CCDC61-208ENST00000601763 FBLN2P98095 1184 aa27.77■■■□□ 2.04
CCDC61-208ENST00000601763 MAGI1Q96QZ7 1491 aaPredicted RBP27.71■■■□□ 2.03
CCDC61-208ENST00000601763 SYNJ2O15056 1496 aa27.64■■■□□ 2.01
CCDC61-208ENST00000601763 CHMP7Q8WUX9 453 aaPredicted RBP27.63■■■□□ 2.01
CCDC61-208ENST00000601763 ADAMTS12P58397 1594 aa27.6■■■□□ 2.01
CCDC61-208ENST00000601763 ERICH3Q5RHP9 1530 aa27.57■■■□□ 2
CCDC61-208ENST00000601763 KIF27Q86VH2 1401 aa27.5■■□□□ 1.99
CCDC61-208ENST00000601763 GRIN2AQ12879 1464 aa27.5■■□□□ 1.99
CCDC61-208ENST00000601763 FHAD1B1AJZ9 1412 aa27.5■■□□□ 1.99
CCDC61-208ENST00000601763 CLASP1Q7Z460 1538 aa27.49■■□□□ 1.99
CCDC61-208ENST00000601763 IGF1RP08069 1367 aa27.48■■□□□ 1.99
CCDC61-208ENST00000601763 RUSC2Q8N2Y8 1516 aa27.47■■□□□ 1.99
CCDC61-208ENST00000601763 TRIM41Q8WV44 630 aa27.47■■□□□ 1.99
CCDC61-208ENST00000601763 RIMBP3CA6NJZ7 1639 aa27.45■■□□□ 1.99
CCDC61-208ENST00000601763 RIMBP3BA6NNM3 1639 aa27.45■■□□□ 1.99
CCDC61-208ENST00000601763 RIMBP3Q9UFD9 1639 aa27.45■■□□□ 1.99
CCDC61-208ENST00000601763 ARHGEF11O15085 1522 aa27.43■■□□□ 1.98
CCDC61-208ENST00000601763 CEP170Q5SW79 1584 aa27.42■■□□□ 1.98
CCDC61-208ENST00000601763 NUP160Q12769 1436 aa27.36■■□□□ 1.97
CCDC61-208ENST00000601763 CUL7Q14999 1698 aa27.3■■□□□ 1.96
CCDC61-208ENST00000601763 CARMIL1Q5VZK9 1371 aa27.27■■□□□ 1.96
CCDC61-208ENST00000601763 ARAP1Q96P48 1450 aa27.25■■□□□ 1.95
CCDC61-208ENST00000601763 CHIC1Q5VXU3 224 aa27.24■■□□□ 1.95
CCDC61-208ENST00000601763 ERCC6L2Q5T890 1561 aa27.23■■□□□ 1.95
CCDC61-208ENST00000601763 CYB5RLQ6IPT4 315 aa27.2■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms