RNA–Protein interactions for RNA: ENST00000601411.1

SNRNP70-210, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 5

Gene SNRNP70, Length 377 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-210ENST00000601411 NISCHQ9Y2I1 1504 aa23.3■■□□□ 1.32
SNRNP70-210ENST00000601411 CCDC180Q9P1Z9 1646 aa20.62■□□□□ 0.89
SNRNP70-210ENST00000601411 ABCC9O60706 1549 aa19.95■□□□□ 0.78
SNRNP70-210ENST00000601411 DCAF8L2P0C7V8 631 aa19.44■□□□□ 0.7
SNRNP70-210ENST00000601411 ZCCHC6Q5VYS8 1495 aaKnown RBP19.41■□□□□ 0.7
SNRNP70-210ENST00000601411 NACADO15069 1562 aa19.39■□□□□ 0.69
SNRNP70-210ENST00000601411 MYO15BQ96JP2 1530 aa19.36■□□□□ 0.69
SNRNP70-210ENST00000601411 RB1CC1Q8TDY2 1594 aa19.34■□□□□ 0.69
SNRNP70-210ENST00000601411 DCAF1Q9Y4B6 1507 aa19.33■□□□□ 0.68
SNRNP70-210ENST00000601411 UNC13AQ9UPW8 1703 aa18.8■□□□□ 0.6
SNRNP70-210ENST00000601411 SCRIBQ14160 1630 aa18.75■□□□□ 0.59
SNRNP70-210ENST00000601411 PABPN1Q86U42 306 aaKnown RBP eCLIP18.7■□□□□ 0.58
SNRNP70-210ENST00000601411 BICRAQ9NZM4 1560 aa18.67■□□□□ 0.58
SNRNP70-210ENST00000601411 SHROOM4Q9ULL8 1493 aa18.61■□□□□ 0.57
SNRNP70-210ENST00000601411 EIF4G1Q04637 1599 aaKnown RBP18.18■□□□□ 0.5
SNRNP70-210ENST00000601411 DNAJC5BQ9UF47 199 aa18.14■□□□□ 0.49
SNRNP70-210ENST00000601411 CECR2Q9BXF3 1484 aa18.07■□□□□ 0.48
SNRNP70-210ENST00000601411 BAZ1AQ9NRL2 1556 aaPredicted RBP18.06■□□□□ 0.48
SNRNP70-210ENST00000601411 CC2D2AQ9P2K1 1620 aa18.05■□□□□ 0.48
SNRNP70-210ENST00000601411 SMARCA4P51532 1647 aa18■□□□□ 0.47
SNRNP70-210ENST00000601411 MROH2BQ7Z745 1585 aa17.91■□□□□ 0.46
SNRNP70-210ENST00000601411 SMARCA2P51531 1590 aa17.91■□□□□ 0.46
SNRNP70-210ENST00000601411 NCAPD3P42695 1498 aa17.89■□□□□ 0.45
SNRNP70-210ENST00000601411 ATAD2BQ9ULI0 1458 aa17.89■□□□□ 0.45
SNRNP70-210ENST00000601411 PEG3Q9GZU2 1588 aa17.86■□□□□ 0.45
SNRNP70-210ENST00000601411 RSF1Q96T23 1441 aaPredicted RBP17.82■□□□□ 0.44
SNRNP70-210ENST00000601411 HMGXB3Q12766 1538 aa17.78■□□□□ 0.44
SNRNP70-210ENST00000601411 BAZ1BQ9UIG0 1483 aaKnown RBP17.75■□□□□ 0.43
SNRNP70-210ENST00000601411 WIZO95785 1651 aa17.71■□□□□ 0.43
SNRNP70-210ENST00000601411 SUPT5HO00267 1087 aaKnown RBP17.58■□□□□ 0.4
SNRNP70-210ENST00000601411 TOP2AP11388 1531 aaKnown RBP17.57■□□□□ 0.4
SNRNP70-210ENST00000601411 CCDC88BA6NC98 1476 aa17.39■□□□□ 0.37
SNRNP70-210ENST00000601411 CADPSQ9ULU8 1353 aa17.39■□□□□ 0.37
SNRNP70-210ENST00000601411 LAMC3Q9Y6N6 1575 aa17.36■□□□□ 0.37
SNRNP70-210ENST00000601411 CFTRP13569 1480 aa17.3■□□□□ 0.36
SNRNP70-210ENST00000601411 PDS5BQ9NTI5 1447 aa17.3■□□□□ 0.36
SNRNP70-210ENST00000601411 NESP48681 1621 aa17.29■□□□□ 0.36
SNRNP70-210ENST00000601411 ERCC6Q03468 1493 aa17.23■□□□□ 0.35
SNRNP70-210ENST00000601411 FANCD2Q9BXW9 1451 aa17.14■□□□□ 0.33
SNRNP70-210ENST00000601411 PRDM2Q13029 1718 aa17.13■□□□□ 0.33
SNRNP70-210ENST00000601411 CEP164Q9UPV0 1460 aa17.11■□□□□ 0.33
SNRNP70-210ENST00000601411 KIF21AQ7Z4S6 1674 aa17.09■□□□□ 0.33
SNRNP70-210ENST00000601411 MRC2Q9UBG0 1479 aa17.04■□□□□ 0.32
SNRNP70-210ENST00000601411 CUX2O14529 1486 aa17■□□□□ 0.31
SNRNP70-210ENST00000601411 ABCC8Q09428 1581 aa17■□□□□ 0.31
SNRNP70-210ENST00000601411 THOC2Q8NI27 1593 aaKnown RBP16.98■□□□□ 0.31
SNRNP70-210ENST00000601411 WDR62O43379 1518 aa16.94■□□□□ 0.3
SNRNP70-210ENST00000601411 URB2Q14146 1524 aaKnown RBP16.91■□□□□ 0.3
SNRNP70-210ENST00000601411 TOPBP1Q92547 1522 aa16.88■□□□□ 0.29
SNRNP70-210ENST00000601411 DNMBPQ6XZF7 1577 aa16.88■□□□□ 0.29
SNRNP70-210ENST00000601411 WRNQ14191 1432 aaPredicted RBP eCLIP16.81■□□□□ 0.28
SNRNP70-210ENST00000601411 CUX1P39880 1505 aa16.79■□□□□ 0.28
SNRNP70-210ENST00000601411 IFT140Q96RY7 1462 aa16.76■□□□□ 0.27
SNRNP70-210ENST00000601411 BIVM-ERCC5R4GMW8 1640 aa16.74■□□□□ 0.27
SNRNP70-210ENST00000601411 SOGA1O94964 1423 aa16.74■□□□□ 0.27
SNRNP70-210ENST00000601411 TOP2BQ02880 1626 aa16.74■□□□□ 0.27
SNRNP70-210ENST00000601411 POLA1P09884 1462 aaPredicted RBP16.73■□□□□ 0.27
SNRNP70-210ENST00000601411 CHIC1Q5VXU3 224 aa16.72■□□□□ 0.27
SNRNP70-210ENST00000601411 FGD5Q6ZNL6 1462 aa16.72■□□□□ 0.27
SNRNP70-210ENST00000601411 SYNJ1O43426 1573 aa16.69■□□□□ 0.26
SNRNP70-210ENST00000601411 TRIM41Q8WV44 630 aa16.65■□□□□ 0.26
SNRNP70-210ENST00000601411 TARBP1Q13395 1621 aaKnown RBP16.65■□□□□ 0.26
SNRNP70-210ENST00000601411 RAD54L2Q9Y4B4 1467 aa16.64■□□□□ 0.25
SNRNP70-210ENST00000601411 WDR97A6NE52 1622 aa16.62■□□□□ 0.25
SNRNP70-210ENST00000601411 ABCA10Q8WWZ4 1543 aa16.6■□□□□ 0.25
SNRNP70-210ENST00000601411 TDRD9Q8NDG6 1382 aaKnown RBP16.58■□□□□ 0.24
SNRNP70-210ENST00000601411 ZNF608Q9ULD9 1512 aaPredicted RBP16.58■□□□□ 0.24
SNRNP70-210ENST00000601411 AQRO60306 1485 aaKnown RBP eCLIP16.56■□□□□ 0.242e-10■■■■■ 43.1
SNRNP70-210ENST00000601411 GAPVD1Q14C86 1478 aa16.53■□□□□ 0.24
SNRNP70-210ENST00000601411 EIF4G3O43432 1585 aaKnown RBP16.51■□□□□ 0.23
SNRNP70-210ENST00000601411 GRIN2BQ13224 1484 aa16.51■□□□□ 0.23
SNRNP70-210ENST00000601411 EEA1Q15075 1411 aa16.48■□□□□ 0.23
SNRNP70-210ENST00000601411 KIF27Q86VH2 1401 aa16.48■□□□□ 0.23
SNRNP70-210ENST00000601411 ABCA5Q8WWZ7 1642 aa16.46■□□□□ 0.23
SNRNP70-210ENST00000601411 MAGI1Q96QZ7 1491 aaPredicted RBP16.44■□□□□ 0.22
SNRNP70-210ENST00000601411 ERICH3Q5RHP9 1530 aa16.43■□□□□ 0.22
SNRNP70-210ENST00000601411 CHMP7Q8WUX9 453 aaPredicted RBP16.41■□□□□ 0.22
SNRNP70-210ENST00000601411 PBRM1Q86U86 1689 aa16.4■□□□□ 0.22
SNRNP70-210ENST00000601411 OSCARQ8IYS5 282 aa16.4■□□□□ 0.22
SNRNP70-210ENST00000601411 IGF1RP08069 1367 aa16.39■□□□□ 0.21
SNRNP70-210ENST00000601411 SNAPC4Q5SXM2 1469 aa16.39■□□□□ 0.21
SNRNP70-210ENST00000601411 FBLN2P98095 1184 aa16.38■□□□□ 0.21
SNRNP70-210ENST00000601411 SYNJ2O15056 1496 aa16.36■□□□□ 0.21
SNRNP70-210ENST00000601411 FHAD1B1AJZ9 1412 aa16.36■□□□□ 0.21
SNRNP70-210ENST00000601411 CARMIL1Q5VZK9 1371 aa16.31■□□□□ 0.2
SNRNP70-210ENST00000601411 CSRNP3Q8WYN3 585 aa16.3■□□□□ 0.2
SNRNP70-210ENST00000601411 CUL7Q14999 1698 aa16.3■□□□□ 0.2
SNRNP70-210ENST00000601411 RUSC2Q8N2Y8 1516 aa16.29■□□□□ 0.2
SNRNP70-210ENST00000601411 DNAJC5Q9H3Z4 198 aa16.28■□□□□ 0.2
SNRNP70-210ENST00000601411 ADAMTS12P58397 1594 aa16.28■□□□□ 0.2
SNRNP70-210ENST00000601411 CHD1O14646 1710 aa16.27■□□□□ 0.19
SNRNP70-210ENST00000601411 GRIN2AQ12879 1464 aa16.26■□□□□ 0.19
SNRNP70-210ENST00000601411 KIF21BO75037 1637 aa16.24■□□□□ 0.19
SNRNP70-210ENST00000601411 RAPGEF2Q9Y4G8 1499 aa16.22■□□□□ 0.19
SNRNP70-210ENST00000601411 PRXQ9BXM0 1461 aa16.21■□□□□ 0.19
SNRNP70-210ENST00000601411 FAM9AQ8IZU1 332 aaPredicted RBP16.2■□□□□ 0.18
SNRNP70-210ENST00000601411 NUP160Q12769 1436 aa16.19■□□□□ 0.18
SNRNP70-210ENST00000601411 GOLGA3Q08378 1498 aa16.16■□□□□ 0.18
SNRNP70-210ENST00000601411 CLASP1Q7Z460 1538 aa16.13■□□□□ 0.17
SNRNP70-210ENST00000601411 KIAA0586Q9BVV6 1533 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms