RNA–Protein interactions for RNA: ENST00000601333.1

ECH1-215, Transcript of enoyl-CoA hydratase 1, humanhuman

TSL 2

Gene ECH1, Length 710 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECH1-215ENST00000601333 NISCHQ9Y2I1 1504 aa35.77■■■■□ 3.32
ECH1-215ENST00000601333 CCDC180Q9P1Z9 1646 aa31.64■■■□□ 2.66
ECH1-215ENST00000601333 ABCC9O60706 1549 aa31.03■■■□□ 2.56
ECH1-215ENST00000601333 DCAF8L2P0C7V8 631 aa29.91■■■□□ 2.38
ECH1-215ENST00000601333 ZCCHC6Q5VYS8 1495 aaKnown RBP29.83■■■□□ 2.37
ECH1-215ENST00000601333 RB1CC1Q8TDY2 1594 aa29.72■■■□□ 2.35
ECH1-215ENST00000601333 NACADO15069 1562 aa29.71■■■□□ 2.35
ECH1-215ENST00000601333 MYO15BQ96JP2 1530 aa29.5■■■□□ 2.31
ECH1-215ENST00000601333 DCAF1Q9Y4B6 1507 aa29.48■■■□□ 2.31
ECH1-215ENST00000601333 UNC13AQ9UPW8 1703 aa29.24■■■□□ 2.27
ECH1-215ENST00000601333 SCRIBQ14160 1630 aa29.07■■■□□ 2.24
ECH1-215ENST00000601333 PABPN1Q86U42 306 aaKnown RBP eCLIP29.07■■■□□ 2.24
ECH1-215ENST00000601333 BICRAQ9NZM4 1560 aa28.99■■■□□ 2.23
ECH1-215ENST00000601333 SHROOM4Q9ULL8 1493 aa28.53■■■□□ 2.16
ECH1-215ENST00000601333 DNAJC5BQ9UF47 199 aa28.47■■■□□ 2.15
ECH1-215ENST00000601333 EIF4G1Q04637 1599 aaKnown RBP28.14■■■□□ 2.1
ECH1-215ENST00000601333 CC2D2AQ9P2K1 1620 aa28.02■■■□□ 2.08
ECH1-215ENST00000601333 CECR2Q9BXF3 1484 aa27.99■■■□□ 2.07
ECH1-215ENST00000601333 SMARCA4P51532 1647 aa27.74■■■□□ 2.03
ECH1-215ENST00000601333 MROH2BQ7Z745 1585 aa27.67■■■□□ 2.02
ECH1-215ENST00000601333 BAZ1AQ9NRL2 1556 aaPredicted RBP27.65■■■□□ 2.02
ECH1-215ENST00000601333 ATAD2BQ9ULI0 1458 aa27.56■■■□□ 2
ECH1-215ENST00000601333 NCAPD3P42695 1498 aa27.45■■□□□ 1.99
ECH1-215ENST00000601333 SMARCA2P51531 1590 aa27.42■■□□□ 1.98
ECH1-215ENST00000601333 WIZO95785 1651 aa27.4■■□□□ 1.98
ECH1-215ENST00000601333 PEG3Q9GZU2 1588 aa27.39■■□□□ 1.98
ECH1-215ENST00000601333 RSF1Q96T23 1441 aaPredicted RBP27.35■■□□□ 1.97
ECH1-215ENST00000601333 HMGXB3Q12766 1538 aa27.31■■□□□ 1.96
ECH1-215ENST00000601333 BAZ1BQ9UIG0 1483 aaKnown RBP27.3■■□□□ 1.96
ECH1-215ENST00000601333 TOP2AP11388 1531 aaKnown RBP26.99■■□□□ 1.91
ECH1-215ENST00000601333 NESP48681 1621 aa26.94■■□□□ 1.9
ECH1-215ENST00000601333 SUPT5HO00267 1087 aaKnown RBP26.83■■□□□ 1.89
ECH1-215ENST00000601333 CCDC88BA6NC98 1476 aa26.74■■□□□ 1.87
ECH1-215ENST00000601333 LAMC3Q9Y6N6 1575 aa26.67■■□□□ 1.86
ECH1-215ENST00000601333 CADPSQ9ULU8 1353 aa26.67■■□□□ 1.86
ECH1-215ENST00000601333 ERCC6Q03468 1493 aa26.61■■□□□ 1.85
ECH1-215ENST00000601333 KIF21AQ7Z4S6 1674 aa26.57■■□□□ 1.84
ECH1-215ENST00000601333 CFTRP13569 1480 aa26.55■■□□□ 1.84
ECH1-215ENST00000601333 PDS5BQ9NTI5 1447 aa26.47■■□□□ 1.83
ECH1-215ENST00000601333 FANCD2Q9BXW9 1451 aa26.41■■□□□ 1.82
ECH1-215ENST00000601333 THOC2Q8NI27 1593 aaKnown RBP26.41■■□□□ 1.82
ECH1-215ENST00000601333 PRDM2Q13029 1718 aa26.35■■□□□ 1.81
ECH1-215ENST00000601333 CEP164Q9UPV0 1460 aa26.32■■□□□ 1.8
ECH1-215ENST00000601333 MRC2Q9UBG0 1479 aa26.26■■□□□ 1.79
ECH1-215ENST00000601333 CUX2O14529 1486 aa26.21■■□□□ 1.79
ECH1-215ENST00000601333 URB2Q14146 1524 aaKnown RBP26.2■■□□□ 1.79
ECH1-215ENST00000601333 WDR62O43379 1518 aa26.19■■□□□ 1.78
ECH1-215ENST00000601333 TOPBP1Q92547 1522 aa26.02■■□□□ 1.76
ECH1-215ENST00000601333 DNMBPQ6XZF7 1577 aa25.95■■□□□ 1.75
ECH1-215ENST00000601333 CUX1P39880 1505 aa25.93■■□□□ 1.74
ECH1-215ENST00000601333 ABCC8Q09428 1581 aa25.89■■□□□ 1.73
ECH1-215ENST00000601333 POLA1P09884 1462 aaPredicted RBP25.81■■□□□ 1.72
ECH1-215ENST00000601333 FGD5Q6ZNL6 1462 aa25.79■■□□□ 1.72
ECH1-215ENST00000601333 RAD54L2Q9Y4B4 1467 aa25.79■■□□□ 1.72
ECH1-215ENST00000601333 ZNF608Q9ULD9 1512 aaPredicted RBP25.78■■□□□ 1.72
ECH1-215ENST00000601333 SYNJ1O43426 1573 aa25.77■■□□□ 1.72
ECH1-215ENST00000601333 TARBP1Q13395 1621 aaKnown RBP25.74■■□□□ 1.71
ECH1-215ENST00000601333 IFT140Q96RY7 1462 aa25.73■■□□□ 1.71
ECH1-215ENST00000601333 WRNQ14191 1432 aaPredicted RBP eCLIP25.72■■□□□ 1.71
ECH1-215ENST00000601333 SOGA1O94964 1423 aa25.68■■□□□ 1.7
ECH1-215ENST00000601333 BIVM-ERCC5R4GMW8 1640 aa25.66■■□□□ 1.7
ECH1-215ENST00000601333 TOP2BQ02880 1626 aa25.66■■□□□ 1.7
ECH1-215ENST00000601333 AQRO60306 1485 aaKnown RBP eCLIP25.62■■□□□ 1.691e-6■■■■■ 64.7
ECH1-215ENST00000601333 EIF4G3O43432 1585 aaKnown RBP25.61■■□□□ 1.69
ECH1-215ENST00000601333 TDRD9Q8NDG6 1382 aaKnown RBP25.59■■□□□ 1.69
ECH1-215ENST00000601333 WDR97A6NE52 1622 aa25.56■■□□□ 1.68
ECH1-215ENST00000601333 ABCA10Q8WWZ4 1543 aa25.47■■□□□ 1.67
ECH1-215ENST00000601333 ABCA5Q8WWZ7 1642 aa25.41■■□□□ 1.66
ECH1-215ENST00000601333 GAPVD1Q14C86 1478 aa25.38■■□□□ 1.65
ECH1-215ENST00000601333 PBRM1Q86U86 1689 aa25.36■■□□□ 1.65
ECH1-215ENST00000601333 SNAPC4Q5SXM2 1469 aa25.35■■□□□ 1.65
ECH1-215ENST00000601333 DNAJC5Q9H3Z4 198 aa25.32■■□□□ 1.64
ECH1-215ENST00000601333 GRIN2BQ13224 1484 aa25.32■■□□□ 1.64
ECH1-215ENST00000601333 CHD1O14646 1710 aa25.29■■□□□ 1.64
ECH1-215ENST00000601333 FBLN2P98095 1184 aa25.24■■□□□ 1.63
ECH1-215ENST00000601333 TRIM41Q8WV44 630 aa25.21■■□□□ 1.63
ECH1-215ENST00000601333 MAGI1Q96QZ7 1491 aaPredicted RBP25.21■■□□□ 1.63
ECH1-215ENST00000601333 RUSC2Q8N2Y8 1516 aa25.19■■□□□ 1.62
ECH1-215ENST00000601333 OSCARQ8IYS5 282 aa25.18■■□□□ 1.62
ECH1-215ENST00000601333 ADAMTS12P58397 1594 aa25.15■■□□□ 1.62
ECH1-215ENST00000601333 SYNJ2O15056 1496 aa25.14■■□□□ 1.61
ECH1-215ENST00000601333 ERICH3Q5RHP9 1530 aa25.13■■□□□ 1.61
ECH1-215ENST00000601333 KIF27Q86VH2 1401 aa25.12■■□□□ 1.61
ECH1-215ENST00000601333 CHMP7Q8WUX9 453 aaPredicted RBP25.12■■□□□ 1.61
ECH1-215ENST00000601333 IGF1RP08069 1367 aa25.1■■□□□ 1.61
ECH1-215ENST00000601333 CHIC1Q5VXU3 224 aa25.1■■□□□ 1.61
ECH1-215ENST00000601333 FHAD1B1AJZ9 1412 aa25.04■■□□□ 1.6
ECH1-215ENST00000601333 GRIN2AQ12879 1464 aa25.03■■□□□ 1.6
ECH1-215ENST00000601333 CEP170Q5SW79 1584 aa24.98■■□□□ 1.59
ECH1-215ENST00000601333 CLASP1Q7Z460 1538 aa24.98■■□□□ 1.59
ECH1-215ENST00000601333 CUL7Q14999 1698 aa24.93■■□□□ 1.58
ECH1-215ENST00000601333 CARMIL1Q5VZK9 1371 aa24.92■■□□□ 1.58
ECH1-215ENST00000601333 NUP160Q12769 1436 aa24.91■■□□□ 1.58
ECH1-215ENST00000601333 RIMBP3CA6NJZ7 1639 aa24.87■■□□□ 1.57
ECH1-215ENST00000601333 RIMBP3BA6NNM3 1639 aa24.87■■□□□ 1.57
ECH1-215ENST00000601333 RIMBP3Q9UFD9 1639 aa24.87■■□□□ 1.57
ECH1-215ENST00000601333 FAM9AQ8IZU1 332 aaPredicted RBP24.86■■□□□ 1.57
ECH1-215ENST00000601333 ARHGEF11O15085 1522 aa24.86■■□□□ 1.57
ECH1-215ENST00000601333 ERCC6L2Q5T890 1561 aa24.8■■□□□ 1.56
ECH1-215ENST00000601333 RAPGEF2Q9Y4G8 1499 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms