RNA–Protein interactions for RNA: ENST00000600710.1

STRN4-220, Transcript of striatin 4, humanhuman

TSL 5

Gene STRN4, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN4-220ENST00000600710 NISCHQ9Y2I1 1504 aa33.86■■■■□ 3.01
STRN4-220ENST00000600710 CCDC180Q9P1Z9 1646 aa30.12■■■□□ 2.41
STRN4-220ENST00000600710 ABCC9O60706 1549 aa29.84■■■□□ 2.37
STRN4-220ENST00000600710 DCAF8L2P0C7V8 631 aa28.68■■■□□ 2.18
STRN4-220ENST00000600710 RB1CC1Q8TDY2 1594 aa28.56■■■□□ 2.16
STRN4-220ENST00000600710 NACADO15069 1562 aa28.46■■■□□ 2.15
STRN4-220ENST00000600710 MYO15BQ96JP2 1530 aa28.18■■■□□ 2.1
STRN4-220ENST00000600710 ZCCHC6Q5VYS8 1495 aaKnown RBP28.1■■■□□ 2.09
STRN4-220ENST00000600710 DCAF1Q9Y4B6 1507 aa27.96■■■□□ 2.07
STRN4-220ENST00000600710 PABPN1Q86U42 306 aaKnown RBP eCLIP27.94■■■□□ 2.06
STRN4-220ENST00000600710 UNC13AQ9UPW8 1703 aa27.79■■■□□ 2.04
STRN4-220ENST00000600710 DNAJC5BQ9UF47 199 aa27.64■■■□□ 2.02
STRN4-220ENST00000600710 BICRAQ9NZM4 1560 aa27.61■■■□□ 2.01
STRN4-220ENST00000600710 SCRIBQ14160 1630 aa27.52■■■□□ 2
STRN4-220ENST00000600710 SHROOM4Q9ULL8 1493 aa27.33■■□□□ 1.97
STRN4-220ENST00000600710 EIF4G1Q04637 1599 aaKnown RBP26.96■■□□□ 1.91
STRN4-220ENST00000600710 CC2D2AQ9P2K1 1620 aa26.92■■□□□ 1.9
STRN4-220ENST00000600710 CECR2Q9BXF3 1484 aa26.84■■□□□ 1.89
STRN4-220ENST00000600710 NCAPD3P42695 1498 aa26.29■■□□□ 1.8
STRN4-220ENST00000600710 SMARCA4P51532 1647 aa26.28■■□□□ 1.8
STRN4-220ENST00000600710 BAZ1AQ9NRL2 1556 aaPredicted RBP26.26■■□□□ 1.79
STRN4-220ENST00000600710 ATAD2BQ9ULI0 1458 aa26.26■■□□□ 1.79
STRN4-220ENST00000600710 SMARCA2P51531 1590 aa26.21■■□□□ 1.79
STRN4-220ENST00000600710 MROH2BQ7Z745 1585 aa26.07■■□□□ 1.76
STRN4-220ENST00000600710 HMGXB3Q12766 1538 aa26.06■■□□□ 1.76
STRN4-220ENST00000600710 BAZ1BQ9UIG0 1483 aaKnown RBP26.05■■□□□ 1.76
STRN4-220ENST00000600710 PEG3Q9GZU2 1588 aa26■■□□□ 1.75
STRN4-220ENST00000600710 ERCC6Q03468 1493 aa25.79■■□□□ 1.72
STRN4-220ENST00000600710 WIZO95785 1651 aa25.77■■□□□ 1.72
STRN4-220ENST00000600710 RSF1Q96T23 1441 aaPredicted RBP25.73■■□□□ 1.71
STRN4-220ENST00000600710 NESP48681 1621 aa25.71■■□□□ 1.71
STRN4-220ENST00000600710 LAMC3Q9Y6N6 1575 aa25.6■■□□□ 1.69
STRN4-220ENST00000600710 CADPSQ9ULU8 1353 aa25.56■■□□□ 1.68
STRN4-220ENST00000600710 PDS5BQ9NTI5 1447 aa25.54■■□□□ 1.68
STRN4-220ENST00000600710 CUX2O14529 1486 aa25.52■■□□□ 1.68
STRN4-220ENST00000600710 TOP2AP11388 1531 aaKnown RBP25.48■■□□□ 1.67
STRN4-220ENST00000600710 KIF21AQ7Z4S6 1674 aa25.34■■□□□ 1.65
STRN4-220ENST00000600710 CFTRP13569 1480 aa25.29■■□□□ 1.64
STRN4-220ENST00000600710 THOC2Q8NI27 1593 aaKnown RBP25.27■■□□□ 1.64
STRN4-220ENST00000600710 CCDC88BA6NC98 1476 aa25.25■■□□□ 1.63
STRN4-220ENST00000600710 FANCD2Q9BXW9 1451 aa25.22■■□□□ 1.63
STRN4-220ENST00000600710 MRC2Q9UBG0 1479 aa25.21■■□□□ 1.63
STRN4-220ENST00000600710 CEP164Q9UPV0 1460 aa25.21■■□□□ 1.63
STRN4-220ENST00000600710 DNAJC5Q9H3Z4 198 aa25.13■■□□□ 1.61
STRN4-220ENST00000600710 SUPT5HO00267 1087 aaKnown RBP25.1■■□□□ 1.61
STRN4-220ENST00000600710 WDR62O43379 1518 aa25.08■■□□□ 1.61
STRN4-220ENST00000600710 PRDM2Q13029 1718 aa24.98■■□□□ 1.59
STRN4-220ENST00000600710 URB2Q14146 1524 aaKnown RBP24.94■■□□□ 1.58
STRN4-220ENST00000600710 ABCC8Q09428 1581 aa24.83■■□□□ 1.57
STRN4-220ENST00000600710 TOPBP1Q92547 1522 aa24.77■■□□□ 1.56
STRN4-220ENST00000600710 IFT140Q96RY7 1462 aa24.71■■□□□ 1.55
STRN4-220ENST00000600710 DNMBPQ6XZF7 1577 aa24.7■■□□□ 1.54
STRN4-220ENST00000600710 OSCARQ8IYS5 282 aa24.59■■□□□ 1.53
STRN4-220ENST00000600710 ZNF608Q9ULD9 1512 aaPredicted RBP24.58■■□□□ 1.53
STRN4-220ENST00000600710 POLA1P09884 1462 aaPredicted RBP24.54■■□□□ 1.52
STRN4-220ENST00000600710 SOGA1O94964 1423 aa24.53■■□□□ 1.52
STRN4-220ENST00000600710 AQRO60306 1485 aaKnown RBP eCLIP24.48■■□□□ 1.513e-7■■■■□ 20.3
STRN4-220ENST00000600710 RAD54L2Q9Y4B4 1467 aa24.48■■□□□ 1.51
STRN4-220ENST00000600710 CUX1P39880 1505 aa24.46■■□□□ 1.51
STRN4-220ENST00000600710 FGD5Q6ZNL6 1462 aa24.46■■□□□ 1.51
STRN4-220ENST00000600710 TARBP1Q13395 1621 aaKnown RBP24.46■■□□□ 1.51
STRN4-220ENST00000600710 TDRD9Q8NDG6 1382 aaKnown RBP24.42■■□□□ 1.5
STRN4-220ENST00000600710 EIF4G3O43432 1585 aaKnown RBP24.42■■□□□ 1.5
STRN4-220ENST00000600710 FBLN2P98095 1184 aa24.38■■□□□ 1.49
STRN4-220ENST00000600710 WRNQ14191 1432 aaPredicted RBP eCLIP24.3■■□□□ 1.48
STRN4-220ENST00000600710 TRIM41Q8WV44 630 aa24.27■■□□□ 1.48
STRN4-220ENST00000600710 WDR97A6NE52 1622 aa24.27■■□□□ 1.48
STRN4-220ENST00000600710 CHMP7Q8WUX9 453 aaPredicted RBP24.26■■□□□ 1.47
STRN4-220ENST00000600710 GRIN2BQ13224 1484 aa24.22■■□□□ 1.47
STRN4-220ENST00000600710 ABCA10Q8WWZ4 1543 aa24.2■■□□□ 1.47
STRN4-220ENST00000600710 GAPVD1Q14C86 1478 aa24.2■■□□□ 1.47
STRN4-220ENST00000600710 SNAPC4Q5SXM2 1469 aa24.19■■□□□ 1.46
STRN4-220ENST00000600710 TOP2BQ02880 1626 aa24.19■■□□□ 1.46
STRN4-220ENST00000600710 MAGI1Q96QZ7 1491 aaPredicted RBP24.16■■□□□ 1.46
STRN4-220ENST00000600710 BIVM-ERCC5R4GMW8 1640 aa24.16■■□□□ 1.46
STRN4-220ENST00000600710 SYNJ1O43426 1573 aa24.16■■□□□ 1.46
STRN4-220ENST00000600710 CHD1O14646 1710 aa24.15■■□□□ 1.46
STRN4-220ENST00000600710 SYNJ2O15056 1496 aa24.07■■□□□ 1.44
STRN4-220ENST00000600710 PBRM1Q86U86 1689 aa24.05■■□□□ 1.44
STRN4-220ENST00000600710 ABCA5Q8WWZ7 1642 aa24.05■■□□□ 1.44
STRN4-220ENST00000600710 RIMBP3CA6NJZ7 1639 aa24.02■■□□□ 1.44
STRN4-220ENST00000600710 RIMBP3BA6NNM3 1639 aa24.02■■□□□ 1.44
STRN4-220ENST00000600710 RIMBP3Q9UFD9 1639 aa24.02■■□□□ 1.44
STRN4-220ENST00000600710 ARHGEF11O15085 1522 aa24.01■■□□□ 1.43
STRN4-220ENST00000600710 CYB5RLQ6IPT4 315 aa23.99■■□□□ 1.43
STRN4-220ENST00000600710 FHAD1B1AJZ9 1412 aa23.92■■□□□ 1.42
STRN4-220ENST00000600710 ERICH3Q5RHP9 1530 aa23.9■■□□□ 1.42
STRN4-220ENST00000600710 CLASP1Q7Z460 1538 aa23.88■■□□□ 1.41
STRN4-220ENST00000600710 GRIN2AQ12879 1464 aa23.87■■□□□ 1.41
STRN4-220ENST00000600710 KIF27Q86VH2 1401 aa23.85■■□□□ 1.41
STRN4-220ENST00000600710 ADAMTS12P58397 1594 aa23.85■■□□□ 1.41
STRN4-220ENST00000600710 ARAP1Q96P48 1450 aa23.78■■□□□ 1.4
STRN4-220ENST00000600710 IGF1RP08069 1367 aa23.78■■□□□ 1.4
STRN4-220ENST00000600710 NUP160Q12769 1436 aa23.76■■□□□ 1.39
STRN4-220ENST00000600710 CEP170Q5SW79 1584 aa23.72■■□□□ 1.39
STRN4-220ENST00000600710 JPH4Q96JJ6 628 aa23.69■■□□□ 1.38
STRN4-220ENST00000600710 CARMIL1Q5VZK9 1371 aa23.65■■□□□ 1.38
STRN4-220ENST00000600710 TRHP20396 242 aaPredicted RBP23.64■■□□□ 1.37
STRN4-220ENST00000600710 CUL7Q14999 1698 aa23.62■■□□□ 1.37
STRN4-220ENST00000600710 PRG4Q92954 1404 aaPredicted RBP23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms