RNA–Protein interactions for RNA: ENST00000600432.1

CHERP-207, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 3

Gene CHERP, Length 554 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-207ENST00000600432 NISCHQ9Y2I1 1504 aa30.83■■■□□ 2.53
CHERP-207ENST00000600432 CCDC180Q9P1Z9 1646 aa27.47■■□□□ 1.99
CHERP-207ENST00000600432 ABCC9O60706 1549 aa27.19■■□□□ 1.94
CHERP-207ENST00000600432 RB1CC1Q8TDY2 1594 aa25.99■■□□□ 1.75
CHERP-207ENST00000600432 DCAF8L2P0C7V8 631 aa25.92■■□□□ 1.74
CHERP-207ENST00000600432 NACADO15069 1562 aa25.9■■□□□ 1.74
CHERP-207ENST00000600432 ZCCHC6Q5VYS8 1495 aaKnown RBP25.64■■□□□ 1.69
CHERP-207ENST00000600432 MYO15BQ96JP2 1530 aa25.63■■□□□ 1.69
CHERP-207ENST00000600432 DCAF1Q9Y4B6 1507 aa25.46■■□□□ 1.67
CHERP-207ENST00000600432 UNC13AQ9UPW8 1703 aa25.43■■□□□ 1.66
CHERP-207ENST00000600432 PABPN1Q86U42 306 aaKnown RBP eCLIP25.39■■□□□ 1.66
CHERP-207ENST00000600432 BICRAQ9NZM4 1560 aa25.25■■□□□ 1.63
CHERP-207ENST00000600432 DNAJC5BQ9UF47 199 aa25.21■■□□□ 1.63
CHERP-207ENST00000600432 SCRIBQ14160 1630 aa25.12■■□□□ 1.61
CHERP-207ENST00000600432 SHROOM4Q9ULL8 1493 aa24.87■■□□□ 1.57
CHERP-207ENST00000600432 EIF4G1Q04637 1599 aaKnown RBP24.59■■□□□ 1.53
CHERP-207ENST00000600432 CC2D2AQ9P2K1 1620 aa24.56■■□□□ 1.52
CHERP-207ENST00000600432 CECR2Q9BXF3 1484 aa24.43■■□□□ 1.5
CHERP-207ENST00000600432 SMARCA4P51532 1647 aa23.98■■□□□ 1.43
CHERP-207ENST00000600432 NCAPD3P42695 1498 aa23.92■■□□□ 1.42
CHERP-207ENST00000600432 ATAD2BQ9ULI0 1458 aa23.92■■□□□ 1.42
CHERP-207ENST00000600432 BAZ1AQ9NRL2 1556 aaPredicted RBP23.9■■□□□ 1.42
CHERP-207ENST00000600432 SMARCA2P51531 1590 aa23.83■■□□□ 1.41
CHERP-207ENST00000600432 MROH2BQ7Z745 1585 aa23.78■■□□□ 1.4
CHERP-207ENST00000600432 HMGXB3Q12766 1538 aa23.76■■□□□ 1.39
CHERP-207ENST00000600432 PEG3Q9GZU2 1588 aa23.73■■□□□ 1.39
CHERP-207ENST00000600432 BAZ1BQ9UIG0 1483 aaKnown RBP23.69■■□□□ 1.38
CHERP-207ENST00000600432 WIZO95785 1651 aa23.52■■□□□ 1.36
CHERP-207ENST00000600432 NESP48681 1621 aa23.47■■□□□ 1.35
CHERP-207ENST00000600432 RSF1Q96T23 1441 aaPredicted RBP23.42■■□□□ 1.34
CHERP-207ENST00000600432 ERCC6Q03468 1493 aa23.42■■□□□ 1.34
CHERP-207ENST00000600432 LAMC3Q9Y6N6 1575 aa23.31■■□□□ 1.32
CHERP-207ENST00000600432 CUX2O14529 1486 aa23.23■■□□□ 1.31
CHERP-207ENST00000600432 TOP2AP11388 1531 aaKnown RBP23.23■■□□□ 1.31
CHERP-207ENST00000600432 CADPSQ9ULU8 1353 aa23.22■■□□□ 1.31
CHERP-207ENST00000600432 PDS5BQ9NTI5 1447 aa23.16■■□□□ 1.3
CHERP-207ENST00000600432 KIF21AQ7Z4S6 1674 aa23.16■■□□□ 1.3
CHERP-207ENST00000600432 THOC2Q8NI27 1593 aaKnown RBP23.13■■□□□ 1.29
CHERP-207ENST00000600432 CFTRP13569 1480 aa23.03■■□□□ 1.28
CHERP-207ENST00000600432 CCDC88BA6NC98 1476 aa22.98■■□□□ 1.27
CHERP-207ENST00000600432 FANCD2Q9BXW9 1451 aa22.96■■□□□ 1.27
CHERP-207ENST00000600432 MRC2Q9UBG0 1479 aa22.95■■□□□ 1.26
CHERP-207ENST00000600432 CEP164Q9UPV0 1460 aa22.93■■□□□ 1.26
CHERP-207ENST00000600432 WDR62O43379 1518 aa22.88■■□□□ 1.25
CHERP-207ENST00000600432 DNAJC5Q9H3Z4 198 aa22.83■■□□□ 1.25
CHERP-207ENST00000600432 PRDM2Q13029 1718 aa22.8■■□□□ 1.24
CHERP-207ENST00000600432 URB2Q14146 1524 aaKnown RBP22.76■■□□□ 1.23
CHERP-207ENST00000600432 SUPT5HO00267 1087 aaKnown RBP22.7■■□□□ 1.22
CHERP-207ENST00000600432 TOPBP1Q92547 1522 aa22.57■■□□□ 1.2
CHERP-207ENST00000600432 DNMBPQ6XZF7 1577 aa22.5■■□□□ 1.19
CHERP-207ENST00000600432 ABCC8Q09428 1581 aa22.5■■□□□ 1.19
CHERP-207ENST00000600432 IFT140Q96RY7 1462 aa22.46■■□□□ 1.19
CHERP-207ENST00000600432 ZNF608Q9ULD9 1512 aaPredicted RBP22.43■■□□□ 1.18
CHERP-207ENST00000600432 POLA1P09884 1462 aaPredicted RBP22.36■■□□□ 1.17
CHERP-207ENST00000600432 TARBP1Q13395 1621 aaKnown RBP22.33■■□□□ 1.17
CHERP-207ENST00000600432 CUX1P39880 1505 aa22.31■■□□□ 1.16
CHERP-207ENST00000600432 EIF4G3O43432 1585 aaKnown RBP22.3■■□□□ 1.16
CHERP-207ENST00000600432 RAD54L2Q9Y4B4 1467 aa22.3■■□□□ 1.16
CHERP-207ENST00000600432 FGD5Q6ZNL6 1462 aa22.28■■□□□ 1.16
CHERP-207ENST00000600432 AQRO60306 1485 aaKnown RBP eCLIP22.28■■□□□ 1.16
CHERP-207ENST00000600432 SOGA1O94964 1423 aa22.26■■□□□ 1.15
CHERP-207ENST00000600432 OSCARQ8IYS5 282 aa22.25■■□□□ 1.15
CHERP-207ENST00000600432 TDRD9Q8NDG6 1382 aaKnown RBP22.19■■□□□ 1.14
CHERP-207ENST00000600432 WDR97A6NE52 1622 aa22.09■■□□□ 1.13
CHERP-207ENST00000600432 WRNQ14191 1432 aaPredicted RBP eCLIP22.08■■□□□ 1.13
CHERP-207ENST00000600432 CHD1O14646 1710 aa22.06■■□□□ 1.12
CHERP-207ENST00000600432 SYNJ1O43426 1573 aa22.06■■□□□ 1.12
CHERP-207ENST00000600432 FBLN2P98095 1184 aa22.05■■□□□ 1.12
CHERP-207ENST00000600432 TOP2BQ02880 1626 aa22.04■■□□□ 1.12
CHERP-207ENST00000600432 BIVM-ERCC5R4GMW8 1640 aa22.04■■□□□ 1.12
CHERP-207ENST00000600432 SNAPC4Q5SXM2 1469 aa22.03■■□□□ 1.12
CHERP-207ENST00000600432 ABCA10Q8WWZ4 1543 aa22.03■■□□□ 1.12
CHERP-207ENST00000600432 GRIN2BQ13224 1484 aa22.02■■□□□ 1.12
CHERP-207ENST00000600432 TRIM41Q8WV44 630 aa22.01■■□□□ 1.11
CHERP-207ENST00000600432 GAPVD1Q14C86 1478 aa21.99■■□□□ 1.11
CHERP-207ENST00000600432 ABCA5Q8WWZ7 1642 aa21.97■■□□□ 1.11
CHERP-207ENST00000600432 MAGI1Q96QZ7 1491 aaPredicted RBP21.96■■□□□ 1.11
CHERP-207ENST00000600432 PBRM1Q86U86 1689 aa21.96■■□□□ 1.11
CHERP-207ENST00000600432 RIMBP3CA6NJZ7 1639 aa21.93■■□□□ 1.1
CHERP-207ENST00000600432 RIMBP3BA6NNM3 1639 aa21.93■■□□□ 1.1
CHERP-207ENST00000600432 CHMP7Q8WUX9 453 aaPredicted RBP21.93■■□□□ 1.1
CHERP-207ENST00000600432 RIMBP3Q9UFD9 1639 aa21.93■■□□□ 1.1
CHERP-207ENST00000600432 ARHGEF11O15085 1522 aa21.9■■□□□ 1.1
CHERP-207ENST00000600432 SYNJ2O15056 1496 aa21.9■■□□□ 1.1
CHERP-207ENST00000600432 CLASP1Q7Z460 1538 aa21.81■■□□□ 1.08
CHERP-207ENST00000600432 ADAMTS12P58397 1594 aa21.78■■□□□ 1.08
CHERP-207ENST00000600432 ERICH3Q5RHP9 1530 aa21.75■■□□□ 1.07
CHERP-207ENST00000600432 CYB5RLQ6IPT4 315 aa21.74■■□□□ 1.07
CHERP-207ENST00000600432 GRIN2AQ12879 1464 aa21.74■■□□□ 1.07
CHERP-207ENST00000600432 FHAD1B1AJZ9 1412 aa21.72■■□□□ 1.07
CHERP-207ENST00000600432 ARAP1Q96P48 1450 aa21.71■■□□□ 1.07
CHERP-207ENST00000600432 CEP170Q5SW79 1584 aa21.65■■□□□ 1.06
CHERP-207ENST00000600432 NUP160Q12769 1436 aa21.65■■□□□ 1.06
CHERP-207ENST00000600432 KIF27Q86VH2 1401 aa21.62■■□□□ 1.05
CHERP-207ENST00000600432 IGF1RP08069 1367 aa21.59■■□□□ 1.05
CHERP-207ENST00000600432 ERCC6L2Q5T890 1561 aa21.54■■□□□ 1.04
CHERP-207ENST00000600432 SHROOM2Q13796 1616 aa21.51■■□□□ 1.03
CHERP-207ENST00000600432 CUL7Q14999 1698 aa21.5■■□□□ 1.03
CHERP-207ENST00000600432 RUSC2Q8N2Y8 1516 aa21.46■■□□□ 1.03
CHERP-207ENST00000600432 CARMIL1Q5VZK9 1371 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 222.6 ms