RNA–Protein interactions for RNA: ENST00000599916.5

ZNF208-204, Transcript of zinc finger protein 208, humanhuman

TSL 1 (best) BASIC

Gene ZNF208, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF208-204ENST00000599916 AEBP2Q6ZN18 517 aaPredicted RBP19.2■□□□□ 0.66
ZNF208-204ENST00000599916 CHIC1Q5VXU3 224 aa18.33■□□□□ 0.52
ZNF208-204ENST00000599916 SENP3Q9H4L4 574 aaPredicted RBP16.26■□□□□ 0.19
ZNF208-204ENST00000599916 PHF23Q9BUL5 403 aaPredicted RBP16.13■□□□□ 0.17
ZNF208-204ENST00000599916 FOXD1Q16676 465 aa15.19■□□□□ 0.02
ZNF208-204ENST00000599916 PLPPR3Q6T4P5 718 aa14.68□□□□□ -0.06
ZNF208-204ENST00000599916 PPP6R1Q9UPN7 881 aa14.35□□□□□ -0.11
ZNF208-204ENST00000599916 ADRA2BP18089 450 aa14.3□□□□□ -0.12
ZNF208-204ENST00000599916 PIAS4Q8N2W9 510 aaPredicted RBP14.21□□□□□ -0.13
ZNF208-204ENST00000599916 MSH5O43196 834 aa14.09□□□□□ -0.15
ZNF208-204ENST00000599916 NISCHQ9Y2I1 1504 aa13.79□□□□□ -0.2
ZNF208-204ENST00000599916 POTEDQ86YR6 584 aa13.56□□□□□ -0.24
ZNF208-204ENST00000599916 ABCC9O60706 1549 aa13.4□□□□□ -0.26
ZNF208-204ENST00000599916 DNAJC5BQ9UF47 199 aa13.15□□□□□ -0.3
ZNF208-204ENST00000599916 MAPK8IP2Q13387 824 aaPredicted RBP13.09□□□□□ -0.31
ZNF208-204ENST00000599916 SCAF1Q9H7N4 1312 aaKnown RBP12.97□□□□□ -0.33
ZNF208-204ENST00000599916 DMRT2Q9Y5R5 561 aa12.95□□□□□ -0.34
ZNF208-204ENST00000599916 PPP4R3CPQ6ZMV5 832 aa12.91□□□□□ -0.34
ZNF208-204ENST00000599916 CCDC180Q9P1Z9 1646 aa12.63□□□□□ -0.39
ZNF208-204ENST00000599916 CNKSR2Q8WXI2 1034 aa12.61□□□□□ -0.39
ZNF208-204ENST00000599916 DNAJC5Q9H3Z4 198 aa12.61□□□□□ -0.39
ZNF208-204ENST00000599916 HOXD11P31277 338 aaPredicted RBP12.53□□□□□ -0.4
ZNF208-204ENST00000599916 RNF216Q9NWF9 866 aaPredicted RBP12.46□□□□□ -0.41
ZNF208-204ENST00000599916 RB1CC1Q8TDY2 1594 aa12.42□□□□□ -0.42
ZNF208-204ENST00000599916 PABPN1Q86U42 306 aaKnown RBP eCLIP12.4□□□□□ -0.42
ZNF208-204ENST00000599916 NCBP3Q53F19 620 aaKnown RBP12.39□□□□□ -0.43
ZNF208-204ENST00000599916 DCAF8L1A6NGE4 600 aa12.38□□□□□ -0.43
ZNF208-204ENST00000599916 NPM3O75607 178 aaKnown RBP12.3□□□□□ -0.44
ZNF208-204ENST00000599916 KCNA4P22459 653 aa12.22□□□□□ -0.45
ZNF208-204ENST00000599916 NACADO15069 1562 aa12.14□□□□□ -0.47
ZNF208-204ENST00000599916 CECR2Q9BXF3 1484 aa12.14□□□□□ -0.47
ZNF208-204ENST00000599916 DCAF8L2P0C7V8 631 aa12.11□□□□□ -0.47
ZNF208-204ENST00000599916 RNF39Q9H2S5 420 aa12.08□□□□□ -0.48
ZNF208-204ENST00000599916 UNC13AQ9UPW8 1703 aa12.03□□□□□ -0.48
ZNF208-204ENST00000599916 BICRAQ9NZM4 1560 aa12.02□□□□□ -0.49
ZNF208-204ENST00000599916 CC2D2AQ9P2K1 1620 aa12.02□□□□□ -0.49
ZNF208-204ENST00000599916 CACNB1Q02641 598 aaPredicted RBP12.01□□□□□ -0.49
ZNF208-204ENST00000599916 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.9□□□□□ -0.5
ZNF208-204ENST00000599916 C1QBPQ07021 282 aaKnown RBP11.87□□□□□ -0.51
ZNF208-204ENST00000599916 TRIM41Q8WV44 630 aa11.86□□□□□ -0.51
ZNF208-204ENST00000599916 EIF4G1Q04637 1599 aaKnown RBP11.82□□□□□ -0.52
ZNF208-204ENST00000599916 CUX2O14529 1486 aa11.82□□□□□ -0.52
ZNF208-204ENST00000599916 SHROOM4Q9ULL8 1493 aa11.82□□□□□ -0.52
ZNF208-204ENST00000599916 SLC4A2P04920 1241 aa11.73□□□□□ -0.53
ZNF208-204ENST00000599916 U3KPZ7 1027 aaPredicted RBP11.73□□□□□ -0.53
ZNF208-204ENST00000599916 MYO15BQ96JP2 1530 aa11.7□□□□□ -0.54
ZNF208-204ENST00000599916 ERCC6Q03468 1493 aa11.67□□□□□ -0.54
ZNF208-204ENST00000599916 SCRIBQ14160 1630 aa11.55□□□□□ -0.56
ZNF208-204ENST00000599916 SPINK5Q9NQ38 1064 aaPredicted RBP11.53□□□□□ -0.56
ZNF208-204ENST00000599916 SLC4A1APQ9BWU0 796 aaKnown RBP11.52□□□□□ -0.57
ZNF208-204ENST00000599916 CAPN15O75808 1086 aa11.44□□□□□ -0.58
ZNF208-204ENST00000599916 DSG3P32926 999 aa11.37□□□□□ -0.59
ZNF208-204ENST00000599916 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.35□□□□□ -0.59
ZNF208-204ENST00000599916 HNRNPUL2Q1KMD3 747 aaKnown RBP11.35□□□□□ -0.59
ZNF208-204ENST00000599916 MYCNP04198 464 aaPredicted RBP11.34□□□□□ -0.59
ZNF208-204ENST00000599916 DCAF1Q9Y4B6 1507 aa11.31□□□□□ -0.6
ZNF208-204ENST00000599916 SAMD1Q6SPF0 538 aaPredicted RBP11.31□□□□□ -0.6
ZNF208-204ENST00000599916 FOXD4L1Q9NU39 408 aa11.31□□□□□ -0.6
ZNF208-204ENST00000599916 TRHP20396 242 aaPredicted RBP11.3□□□□□ -0.6
ZNF208-204ENST00000599916 APLP2Q06481 763 aa11.3□□□□□ -0.6
ZNF208-204ENST00000599916 NESP48681 1621 aa11.28□□□□□ -0.6
ZNF208-204ENST00000599916 ZBTB22O15209 634 aa11.27□□□□□ -0.61
ZNF208-204ENST00000599916 ZCCHC6Q5VYS8 1495 aaKnown RBP11.26□□□□□ -0.61
ZNF208-204ENST00000599916 THOC2Q8NI27 1593 aaKnown RBP11.26□□□□□ -0.61
ZNF208-204ENST00000599916 ZNF219Q9P2Y4 722 aaPredicted RBP11.26□□□□□ -0.61
ZNF208-204ENST00000599916 ABCB7O75027 752 aa11.23□□□□□ -0.61
ZNF208-204ENST00000599916 NCAPD3P42695 1498 aa11.22□□□□□ -0.61
ZNF208-204ENST00000599916 OSCARQ8IYS5 282 aa11.22□□□□□ -0.61
ZNF208-204ENST00000599916 SMARCA2P51531 1590 aa11.21□□□□□ -0.61
ZNF208-204ENST00000599916 BAZ1AQ9NRL2 1556 aaPredicted RBP11.15□□□□□ -0.62
ZNF208-204ENST00000599916 ATF5Q9Y2D1 282 aaPredicted RBP11.14□□□□□ -0.63
ZNF208-204ENST00000599916 ATAD2BQ9ULI0 1458 aa11.1□□□□□ -0.63
ZNF208-204ENST00000599916 PDS5BQ9NTI5 1447 aa11.09□□□□□ -0.63
ZNF208-204ENST00000599916 LAMC3Q9Y6N6 1575 aa11.08□□□□□ -0.64
ZNF208-204ENST00000599916 KIF21AQ7Z4S6 1674 aa11.08□□□□□ -0.64
ZNF208-204ENST00000599916 RIMBP3CA6NJZ7 1639 aa11.07□□□□□ -0.64
ZNF208-204ENST00000599916 RIMBP3BA6NNM3 1639 aa11.07□□□□□ -0.64
ZNF208-204ENST00000599916 RIMBP3Q9UFD9 1639 aa11.07□□□□□ -0.64
ZNF208-204ENST00000599916 HMGXB3Q12766 1538 aa11.06□□□□□ -0.64
ZNF208-204ENST00000599916 POLA2Q14181 598 aa11.04□□□□□ -0.64
ZNF208-204ENST00000599916 MRC2Q9UBG0 1479 aa11.02□□□□□ -0.65
ZNF208-204ENST00000599916 CYB5RLQ6IPT4 315 aa11.02□□□□□ -0.65
ZNF208-204ENST00000599916 BAZ1BQ9UIG0 1483 aaKnown RBP11□□□□□ -0.65
ZNF208-204ENST00000599916 ARHGEF11O15085 1522 aa10.98□□□□□ -0.65
ZNF208-204ENST00000599916 WDR62O43379 1518 aa10.97□□□□□ -0.65
ZNF208-204ENST00000599916 ILDR1Q86SU0 546 aaPredicted RBP10.94□□□□□ -0.66
ZNF208-204ENST00000599916 ATXN8OSP0DMR3 200 aa10.91□□□□□ -0.66
ZNF208-204ENST00000599916 SMARCA4P51532 1647 aa10.9□□□□□ -0.66
ZNF208-204ENST00000599916 CADPSQ9ULU8 1353 aa10.89□□□□□ -0.67
ZNF208-204ENST00000599916 CSRNP3Q8WYN3 585 aa10.86□□□□□ -0.67
ZNF208-204ENST00000599916 CEP164Q9UPV0 1460 aa10.85□□□□□ -0.67
ZNF208-204ENST00000599916 EHMT2Q96KQ7 1210 aa10.84□□□□□ -0.67
ZNF208-204ENST00000599916 ARAP1Q96P48 1450 aa10.82□□□□□ -0.68
ZNF208-204ENST00000599916 RBM42Q9BTD8 480 aaKnown RBP10.78□□□□□ -0.68
ZNF208-204ENST00000599916 ZBTB12Q9Y330 459 aaPredicted RBP10.77□□□□□ -0.69
ZNF208-204ENST00000599916 FANCD2Q9BXW9 1451 aa10.76□□□□□ -0.69
ZNF208-204ENST00000599916 PEG3Q9GZU2 1588 aa10.75□□□□□ -0.69
ZNF208-204ENST00000599916 RSF1Q96T23 1441 aaPredicted RBP10.69□□□□□ -0.7
ZNF208-204ENST00000599916 FBLN2P98095 1184 aa10.69□□□□□ -0.7
ZNF208-204ENST00000599916 URB2Q14146 1524 aaKnown RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms