RNA–Protein interactions for RNA: ENST00000599906.5

ZNF43-212, Transcript of zinc finger protein 43, humanhuman

TSL 4

Gene ZNF43, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF43-212ENST00000599906 AEBP2Q6ZN18 517 aaPredicted RBP24.71■■□□□ 1.55
ZNF43-212ENST00000599906 CHIC1Q5VXU3 224 aa23.34■■□□□ 1.33
ZNF43-212ENST00000599906 NISCHQ9Y2I1 1504 aa21.85■■□□□ 1.09
ZNF43-212ENST00000599906 SENP3Q9H4L4 574 aaPredicted RBP21.09■□□□□ 0.97
ZNF43-212ENST00000599906 PHF23Q9BUL5 403 aaPredicted RBP20.76■□□□□ 0.91
ZNF43-212ENST00000599906 POTEDQ86YR6 584 aa20.17■□□□□ 0.82
ZNF43-212ENST00000599906 FOXD1Q16676 465 aa19.67■□□□□ 0.74
ZNF43-212ENST00000599906 CCDC180Q9P1Z9 1646 aa19.54■□□□□ 0.72
ZNF43-212ENST00000599906 ABCC9O60706 1549 aa19.34■□□□□ 0.69
ZNF43-212ENST00000599906 PLPPR3Q6T4P5 718 aa18.57■□□□□ 0.56
ZNF43-212ENST00000599906 MSH5O43196 834 aa18.56■□□□□ 0.56
ZNF43-212ENST00000599906 RB1CC1Q8TDY2 1594 aa18.45■□□□□ 0.54
ZNF43-212ENST00000599906 NACADO15069 1562 aa18.38■□□□□ 0.53
ZNF43-212ENST00000599906 PIAS4Q8N2W9 510 aaPredicted RBP18.35■□□□□ 0.53
ZNF43-212ENST00000599906 PPP6R1Q9UPN7 881 aa18.27■□□□□ 0.52
ZNF43-212ENST00000599906 DCAF8L2P0C7V8 631 aa18.24■□□□□ 0.51
ZNF43-212ENST00000599906 UNC13AQ9UPW8 1703 aa18.21■□□□□ 0.51
ZNF43-212ENST00000599906 ADRA2BP18089 450 aa18.2■□□□□ 0.5
ZNF43-212ENST00000599906 MYO15BQ96JP2 1530 aa18.18■□□□□ 0.5
ZNF43-212ENST00000599906 ZCCHC6Q5VYS8 1495 aaKnown RBP18.18■□□□□ 0.5
ZNF43-212ENST00000599906 DCAF1Q9Y4B6 1507 aa18.03■□□□□ 0.48
ZNF43-212ENST00000599906 BICRAQ9NZM4 1560 aa18.02■□□□□ 0.48
ZNF43-212ENST00000599906 PABPN1Q86U42 306 aaKnown RBP eCLIP18.01■□□□□ 0.47
ZNF43-212ENST00000599906 DNAJC5BQ9UF47 199 aa18.01■□□□□ 0.47
ZNF43-212ENST00000599906 SCRIBQ14160 1630 aa17.85■□□□□ 0.45
ZNF43-212ENST00000599906 SHROOM4Q9ULL8 1493 aa17.65■□□□□ 0.42
ZNF43-212ENST00000599906 CC2D2AQ9P2K1 1620 aa17.5■□□□□ 0.39
ZNF43-212ENST00000599906 EIF4G1Q04637 1599 aaKnown RBP17.5■□□□□ 0.39
ZNF43-212ENST00000599906 CECR2Q9BXF3 1484 aa17.37■□□□□ 0.37
ZNF43-212ENST00000599906 SMARCA4P51532 1647 aa17.03■□□□□ 0.32
ZNF43-212ENST00000599906 ATAD2BQ9ULI0 1458 aa16.97■□□□□ 0.31
ZNF43-212ENST00000599906 NCAPD3P42695 1498 aa16.96■□□□□ 0.31
ZNF43-212ENST00000599906 BAZ1AQ9NRL2 1556 aaPredicted RBP16.92■□□□□ 0.3
ZNF43-212ENST00000599906 SMARCA2P51531 1590 aa16.89■□□□□ 0.29
ZNF43-212ENST00000599906 MROH2BQ7Z745 1585 aa16.88■□□□□ 0.29
ZNF43-212ENST00000599906 HMGXB3Q12766 1538 aa16.87■□□□□ 0.29
ZNF43-212ENST00000599906 PEG3Q9GZU2 1588 aa16.85■□□□□ 0.29
ZNF43-212ENST00000599906 BAZ1BQ9UIG0 1483 aaKnown RBP16.78■□□□□ 0.28
ZNF43-212ENST00000599906 MAPK8IP2Q13387 824 aaPredicted RBP16.75■□□□□ 0.27
ZNF43-212ENST00000599906 NESP48681 1621 aa16.71■□□□□ 0.27
ZNF43-212ENST00000599906 DMRT2Q9Y5R5 561 aa16.71■□□□□ 0.27
ZNF43-212ENST00000599906 WIZO95785 1651 aa16.71■□□□□ 0.27
ZNF43-212ENST00000599906 SCAF1Q9H7N4 1312 aaKnown RBP16.63■□□□□ 0.25
ZNF43-212ENST00000599906 ERCC6Q03468 1493 aa16.61■□□□□ 0.25
ZNF43-212ENST00000599906 CACNB1Q02641 598 aaPredicted RBP16.59■□□□□ 0.25
ZNF43-212ENST00000599906 RSF1Q96T23 1441 aaPredicted RBP16.57■□□□□ 0.24
ZNF43-212ENST00000599906 LAMC3Q9Y6N6 1575 aa16.55■□□□□ 0.24
ZNF43-212ENST00000599906 KIF21AQ7Z4S6 1674 aa16.53■□□□□ 0.24
ZNF43-212ENST00000599906 CUX2O14529 1486 aa16.53■□□□□ 0.24
ZNF43-212ENST00000599906 THOC2Q8NI27 1593 aaKnown RBP16.52■□□□□ 0.24
ZNF43-212ENST00000599906 TOP2AP11388 1531 aaKnown RBP16.46■□□□□ 0.23
ZNF43-212ENST00000599906 CADPSQ9ULU8 1353 aa16.43■□□□□ 0.22
ZNF43-212ENST00000599906 PDS5BQ9NTI5 1447 aa16.39■□□□□ 0.21
ZNF43-212ENST00000599906 CFTRP13569 1480 aa16.32■□□□□ 0.2
ZNF43-212ENST00000599906 MRC2Q9UBG0 1479 aa16.3■□□□□ 0.2
ZNF43-212ENST00000599906 WDR62O43379 1518 aa16.29■□□□□ 0.2
ZNF43-212ENST00000599906 DNAJC5Q9H3Z4 198 aa16.28■□□□□ 0.2
ZNF43-212ENST00000599906 FANCD2Q9BXW9 1451 aa16.28■□□□□ 0.2
ZNF43-212ENST00000599906 PRDM2Q13029 1718 aa16.27■□□□□ 0.19
ZNF43-212ENST00000599906 CCDC88BA6NC98 1476 aa16.27■□□□□ 0.19
ZNF43-212ENST00000599906 PPP4R3CPQ6ZMV5 832 aa16.26■□□□□ 0.19
ZNF43-212ENST00000599906 CEP164Q9UPV0 1460 aa16.26■□□□□ 0.19
ZNF43-212ENST00000599906 URB2Q14146 1524 aaKnown RBP16.19■□□□□ 0.18
ZNF43-212ENST00000599906 HOXD11P31277 338 aaPredicted RBP16.05■□□□□ 0.16
ZNF43-212ENST00000599906 TOPBP1Q92547 1522 aa16.02■□□□□ 0.15
ZNF43-212ENST00000599906 DCAF8L1A6NGE4 600 aa15.98■□□□□ 0.15
ZNF43-212ENST00000599906 CNKSR2Q8WXI2 1034 aa15.98■□□□□ 0.15
ZNF43-212ENST00000599906 DNMBPQ6XZF7 1577 aa15.97■□□□□ 0.15
ZNF43-212ENST00000599906 ZNF608Q9ULD9 1512 aaPredicted RBP15.96■□□□□ 0.15
ZNF43-212ENST00000599906 IFT140Q96RY7 1462 aa15.92■□□□□ 0.14
ZNF43-212ENST00000599906 SUPT5HO00267 1087 aaKnown RBP15.91■□□□□ 0.14
ZNF43-212ENST00000599906 TARBP1Q13395 1621 aaKnown RBP15.9■□□□□ 0.14
ZNF43-212ENST00000599906 ABCC8Q09428 1581 aa15.89■□□□□ 0.13
ZNF43-212ENST00000599906 EIF4G3O43432 1585 aaKnown RBP15.88■□□□□ 0.13
ZNF43-212ENST00000599906 POLA1P09884 1462 aaPredicted RBP15.87■□□□□ 0.13
ZNF43-212ENST00000599906 RNF216Q9NWF9 866 aaPredicted RBP15.87■□□□□ 0.13
ZNF43-212ENST00000599906 CUX1P39880 1505 aa15.84■□□□□ 0.13
ZNF43-212ENST00000599906 RAD54L2Q9Y4B4 1467 aa15.83■□□□□ 0.12
ZNF43-212ENST00000599906 RNF39Q9H2S5 420 aa15.82■□□□□ 0.12
ZNF43-212ENST00000599906 AQRO60306 1485 aaKnown RBP eCLIP15.8■□□□□ 0.12
ZNF43-212ENST00000599906 FGD5Q6ZNL6 1462 aa15.79■□□□□ 0.12
ZNF43-212ENST00000599906 CHD1O14646 1710 aa15.76■□□□□ 0.11
ZNF43-212ENST00000599906 WDR97A6NE52 1622 aa15.76■□□□□ 0.11
ZNF43-212ENST00000599906 OSCARQ8IYS5 282 aa15.74■□□□□ 0.11
ZNF43-212ENST00000599906 SOGA1O94964 1423 aa15.74■□□□□ 0.11
ZNF43-212ENST00000599906 TDRD9Q8NDG6 1382 aaKnown RBP15.71■□□□□ 0.11
ZNF43-212ENST00000599906 RIMBP3CA6NJZ7 1639 aa15.67■□□□□ 0.1
ZNF43-212ENST00000599906 RIMBP3BA6NNM3 1639 aa15.67■□□□□ 0.1
ZNF43-212ENST00000599906 RIMBP3Q9UFD9 1639 aa15.67■□□□□ 0.1
ZNF43-212ENST00000599906 SYNJ1O43426 1573 aa15.66■□□□□ 0.1
ZNF43-212ENST00000599906 SNAPC4Q5SXM2 1469 aa15.65■□□□□ 0.1
ZNF43-212ENST00000599906 BIVM-ERCC5R4GMW8 1640 aa15.65■□□□□ 0.1
ZNF43-212ENST00000599906 PBRM1Q86U86 1689 aa15.64■□□□□ 0.09
ZNF43-212ENST00000599906 TRIM41Q8WV44 630 aa15.64■□□□□ 0.09
ZNF43-212ENST00000599906 ABCA5Q8WWZ7 1642 aa15.63■□□□□ 0.09
ZNF43-212ENST00000599906 TOP2BQ02880 1626 aa15.62■□□□□ 0.09
ZNF43-212ENST00000599906 ABCA10Q8WWZ4 1543 aa15.62■□□□□ 0.09
ZNF43-212ENST00000599906 ARHGEF11O15085 1522 aa15.6■□□□□ 0.09
ZNF43-212ENST00000599906 GRIN2BQ13224 1484 aa15.59■□□□□ 0.09
ZNF43-212ENST00000599906 WRNQ14191 1432 aaPredicted RBP eCLIP15.58■□□□□ 0.085e-6■■■■■ 29.2
Retrieved 100 of 20,778 RNA–protein pairs in 149.7 ms