RNA–Protein interactions for RNA: ENST00000599841.1

AC135012.3-201, humanhuman

TSL 4 BASIC

Gene AC135012.3, Length 4,039 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC135012.3-201ENST00000599841 NISCHQ9Y2I1 1504 aa15.09■□□□□ 0.01
AC135012.3-201ENST00000599841 DCAF8L2P0C7V8 631 aa13.81□□□□□ -0.2
AC135012.3-201ENST00000599841 PELP1Q8IZL8 1130 aaKnown RBP13.62□□□□□ -0.23
AC135012.3-201ENST00000599841 SHROOM4Q9ULL8 1493 aa13.44□□□□□ -0.26
AC135012.3-201ENST00000599841 HRCP23327 699 aa13.35□□□□□ -0.27
AC135012.3-201ENST00000599841 MYT1Q01538 1121 aa13.26□□□□□ -0.29
AC135012.3-201ENST00000599841 SUPT5HO00267 1087 aaKnown RBP13.12□□□□□ -0.31
AC135012.3-201ENST00000599841 ABCC9O60706 1549 aa13.12□□□□□ -0.31
AC135012.3-201ENST00000599841 PPARGC1BQ86YN6 1023 aaKnown RBP13.01□□□□□ -0.33
AC135012.3-201ENST00000599841 PCGF6Q9BYE7 350 aa12.96□□□□□ -0.34
AC135012.3-201ENST00000599841 CCDC180Q9P1Z9 1646 aa12.89□□□□□ -0.35
AC135012.3-201ENST00000599841 SCAF1Q9H7N4 1312 aaKnown RBP12.79□□□□□ -0.36
AC135012.3-201ENST00000599841 PABPN1Q86U42 306 aaKnown RBP eCLIP12.59□□□□□ -0.39
AC135012.3-201ENST00000599841 ZCCHC6Q5VYS8 1495 aaKnown RBP12.55□□□□□ -0.4
AC135012.3-201ENST00000599841 ZEB1P37275 1124 aaPredicted RBP12.54□□□□□ -0.4
AC135012.3-201ENST00000599841 TTBK1Q5TCY1 1321 aaPredicted RBP12.52□□□□□ -0.41
AC135012.3-201ENST00000599841 EHMT2Q96KQ7 1210 aa12.46□□□□□ -0.41
AC135012.3-201ENST00000599841 ACIN1Q9UKV3 1341 aaKnown RBP12.45□□□□□ -0.42
AC135012.3-201ENST00000599841 TRIM26Q12899 539 aaPredicted RBP12.43□□□□□ -0.42
AC135012.3-201ENST00000599841 SCRIBQ14160 1630 aa12.4□□□□□ -0.42
AC135012.3-201ENST00000599841 MYO15BQ96JP2 1530 aa12.38□□□□□ -0.43
AC135012.3-201ENST00000599841 CHIC1Q5VXU3 224 aa12.38□□□□□ -0.43
AC135012.3-201ENST00000599841 GTF3C3Q9Y5Q9 886 aa12.38□□□□□ -0.43
AC135012.3-201ENST00000599841 CENPBP07199 599 aaPredicted RBP12.38□□□□□ -0.43
AC135012.3-201ENST00000599841 NEUROD1Q13562 356 aa12.35□□□□□ -0.43
AC135012.3-201ENST00000599841 DCAF1Q9Y4B6 1507 aa12.33□□□□□ -0.44
AC135012.3-201ENST00000599841 RB1CC1Q8TDY2 1594 aa12.29□□□□□ -0.44
AC135012.3-201ENST00000599841 FAM9AQ8IZU1 332 aaPredicted RBP12.28□□□□□ -0.44
AC135012.3-201ENST00000599841 NACADO15069 1562 aa12.24□□□□□ -0.45
AC135012.3-201ENST00000599841 BCL11AQ9H165 835 aa12.19□□□□□ -0.46
AC135012.3-201ENST00000599841 LOC105371045A0A1W2PR82 267 aa12.16□□□□□ -0.46
AC135012.3-201ENST00000599841 TRIM41Q8WV44 630 aa12.07□□□□□ -0.48
AC135012.3-201ENST00000599841 DIEXFQ68CQ4 756 aaKnown RBP12.07□□□□□ -0.48
AC135012.3-201ENST00000599841 CECR2Q9BXF3 1484 aa11.98□□□□□ -0.49
AC135012.3-201ENST00000599841 ANP32EQ9BTT0 268 aa11.97□□□□□ -0.49
AC135012.3-201ENST00000599841 YTHDC1Q96MU7 727 aaKnown RBP11.96□□□□□ -0.5
AC135012.3-201ENST00000599841 PRKCSHP14314 528 aaPredicted RBP11.95□□□□□ -0.5
AC135012.3-201ENST00000599841 CCER1Q8TC90 406 aaPredicted RBP11.93□□□□□ -0.5
AC135012.3-201ENST00000599841 RANGAP1P46060 587 aaPredicted RBP11.92□□□□□ -0.5
AC135012.3-201ENST00000599841 RSF1Q96T23 1441 aaPredicted RBP11.92□□□□□ -0.5
AC135012.3-201ENST00000599841 ERICH6Q7L0X2 663 aa11.88□□□□□ -0.51
AC135012.3-201ENST00000599841 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.85□□□□□ -0.51
AC135012.3-201ENST00000599841 UNC13AQ9UPW8 1703 aa11.83□□□□□ -0.52
AC135012.3-201ENST00000599841 CSRNP3Q8WYN3 585 aa11.81□□□□□ -0.52
AC135012.3-201ENST00000599841 BICRAQ9NZM4 1560 aa11.8□□□□□ -0.52
AC135012.3-201ENST00000599841 MROH2BQ7Z745 1585 aa11.79□□□□□ -0.52
AC135012.3-201ENST00000599841 DNAJC5BQ9UF47 199 aa11.75□□□□□ -0.53
AC135012.3-201ENST00000599841 ZNF316A6NFI3 1004 aaPredicted RBP11.72□□□□□ -0.53
AC135012.3-201ENST00000599841 CLSPNQ9HAW4 1339 aa11.72□□□□□ -0.53
AC135012.3-201ENST00000599841 UBTFP17480 764 aaKnown RBP11.71□□□□□ -0.53
AC135012.3-201ENST00000599841 TSHZ2Q9NRE2 1034 aa11.69□□□□□ -0.54
AC135012.3-201ENST00000599841 BAZ1AQ9NRL2 1556 aaPredicted RBP11.67□□□□□ -0.54
AC135012.3-201ENST00000599841 WIZO95785 1651 aa11.66□□□□□ -0.54
AC135012.3-201ENST00000599841 MIER1Q8N108 512 aa11.66□□□□□ -0.54
AC135012.3-201ENST00000599841 SUPT16HQ9Y5B9 1047 aaKnown RBP11.65□□□□□ -0.54
AC135012.3-201ENST00000599841 BAZ1BQ9UIG0 1483 aaKnown RBP11.62□□□□□ -0.55
AC135012.3-201ENST00000599841 EIF4G1Q04637 1599 aaKnown RBP11.61□□□□□ -0.55
AC135012.3-201ENST00000599841 SMARCA4P51532 1647 aa11.6□□□□□ -0.55
AC135012.3-201ENST00000599841 APLP2Q06481 763 aa11.56□□□□□ -0.56
AC135012.3-201ENST00000599841 ATAD2BQ9ULI0 1458 aa11.56□□□□□ -0.56
AC135012.3-201ENST00000599841 CC2D2AQ9P2K1 1620 aa11.53□□□□□ -0.56
AC135012.3-201ENST00000599841 CCDC88BA6NC98 1476 aa11.51□□□□□ -0.57
AC135012.3-201ENST00000599841 ATP1B4Q9UN42 357 aaPredicted RBP11.5□□□□□ -0.57
AC135012.3-201ENST00000599841 SMARCA2P51531 1590 aa11.46□□□□□ -0.57
AC135012.3-201ENST00000599841 ABCC8Q09428 1581 aa11.46□□□□□ -0.57
AC135012.3-201ENST00000599841 BCANQ96GW7 911 aa11.44□□□□□ -0.58
AC135012.3-201ENST00000599841 RBM19Q9Y4C8 960 aaKnown RBP11.42□□□□□ -0.58
AC135012.3-201ENST00000599841 MYT1LQ9UL68 1186 aa11.42□□□□□ -0.58
AC135012.3-201ENST00000599841 TOP2AP11388 1531 aaKnown RBP11.38□□□□□ -0.59
AC135012.3-201ENST00000599841 ANO8Q9HCE9 1232 aaPredicted RBP11.38□□□□□ -0.59
AC135012.3-201ENST00000599841 NCAPD3P42695 1498 aa11.37□□□□□ -0.59
AC135012.3-201ENST00000599841 SOGA1O94964 1423 aa11.37□□□□□ -0.59
AC135012.3-201ENST00000599841 NEFLP07196 543 aa11.37□□□□□ -0.59
AC135012.3-201ENST00000599841 NESP48681 1621 aa11.36□□□□□ -0.59
AC135012.3-201ENST00000599841 P3H3Q8IVL6 736 aa11.34□□□□□ -0.59
AC135012.3-201ENST00000599841 FKBP8Q14318 412 aa11.34□□□□□ -0.59
AC135012.3-201ENST00000599841 WRNQ14191 1432 aaPredicted RBP eCLIP11.34□□□□□ -0.59
AC135012.3-201ENST00000599841 ERCC6Q03468 1493 aa11.31□□□□□ -0.6
AC135012.3-201ENST00000599841 DEKP35659 375 aaKnown RBP11.31□□□□□ -0.6
AC135012.3-201ENST00000599841 RUSC2Q8N2Y8 1516 aa11.29□□□□□ -0.6
AC135012.3-201ENST00000599841 ITGAEP38570 1179 aa11.28□□□□□ -0.6
AC135012.3-201ENST00000599841 FBLN2P98095 1184 aa11.28□□□□□ -0.6
AC135012.3-201ENST00000599841 CADPSQ9ULU8 1353 aa11.28□□□□□ -0.6
AC135012.3-201ENST00000599841 HNRNPUL2Q1KMD3 747 aaKnown RBP11.27□□□□□ -0.6
AC135012.3-201ENST00000599841 MSH5O43196 834 aa11.26□□□□□ -0.61
AC135012.3-201ENST00000599841 ARID3CA6NKF2 412 aa11.25□□□□□ -0.61
AC135012.3-201ENST00000599841 ERICH6BQ5W0A0 696 aa11.24□□□□□ -0.61
AC135012.3-201ENST00000599841 HMGXB3Q12766 1538 aa11.22□□□□□ -0.61
AC135012.3-201ENST00000599841 FANCIQ9NVI1 1328 aa11.22□□□□□ -0.61
AC135012.3-201ENST00000599841 SALL2Q9Y467 1007 aaPredicted RBP11.22□□□□□ -0.61
AC135012.3-201ENST00000599841 CDK11AQ9UQ88 783 aaPredicted RBP11.19□□□□□ -0.62
AC135012.3-201ENST00000599841 CCDC136Q96JN2 1154 aa11.19□□□□□ -0.62
AC135012.3-201ENST00000599841 UBE2Q2Q8WVN8 375 aa11.19□□□□□ -0.62
AC135012.3-201ENST00000599841 PEG3Q9GZU2 1588 aa11.18□□□□□ -0.62
AC135012.3-201ENST00000599841 FANCD2Q9BXW9 1451 aa11.17□□□□□ -0.62
AC135012.3-201ENST00000599841 SLC24A1O60721 1099 aa11.17□□□□□ -0.62
AC135012.3-201ENST00000599841 PDS5BQ9NTI5 1447 aa11.16□□□□□ -0.62
AC135012.3-201ENST00000599841 CEP162Q5TB80 1403 aa11.12□□□□□ -0.63
AC135012.3-201ENST00000599841 NBR1Q14596 966 aa11.12□□□□□ -0.63
AC135012.3-201ENST00000599841 RTL5Q5HYW3 569 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms