RNA–Protein interactions for RNA: ENST00000599825.2

LSP1P1-201, Transcript of LSP1 pseudogene 1, humanhuman

BASIC

Gene LSP1P1, Length 133 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P1-201ENST00000599825 NISCHQ9Y2I1 1504 aa25.29■■□□□ 1.64
LSP1P1-201ENST00000599825 ABCC9O60706 1549 aa22.78■■□□□ 1.24
LSP1P1-201ENST00000599825 CCDC180Q9P1Z9 1646 aa22.65■■□□□ 1.22
LSP1P1-201ENST00000599825 RB1CC1Q8TDY2 1594 aa21.58■■□□□ 1.05
LSP1P1-201ENST00000599825 DCAF8L2P0C7V8 631 aa21.55■■□□□ 1.04
LSP1P1-201ENST00000599825 NACADO15069 1562 aa21.39■■□□□ 1.01
LSP1P1-201ENST00000599825 DNAJC5BQ9UF47 199 aa21.25■□□□□ 0.99
LSP1P1-201ENST00000599825 PABPN1Q86U42 306 aaKnown RBP eCLIP21.23■□□□□ 0.99
LSP1P1-201ENST00000599825 UNC13AQ9UPW8 1703 aa21.13■□□□□ 0.97
LSP1P1-201ENST00000599825 MYO15BQ96JP2 1530 aa20.99■□□□□ 0.95
LSP1P1-201ENST00000599825 ZCCHC6Q5VYS8 1495 aaKnown RBP20.98■□□□□ 0.95
LSP1P1-201ENST00000599825 BICRAQ9NZM4 1560 aa20.94■□□□□ 0.94
LSP1P1-201ENST00000599825 SCRIBQ14160 1630 aa20.82■□□□□ 0.92
LSP1P1-201ENST00000599825 DCAF1Q9Y4B6 1507 aa20.78■□□□□ 0.92
LSP1P1-201ENST00000599825 SHROOM4Q9ULL8 1493 aa20.53■□□□□ 0.88
LSP1P1-201ENST00000599825 CC2D2AQ9P2K1 1620 aa20.52■□□□□ 0.88
LSP1P1-201ENST00000599825 EIF4G1Q04637 1599 aaKnown RBP20.46■□□□□ 0.87
LSP1P1-201ENST00000599825 CECR2Q9BXF3 1484 aa20.45■□□□□ 0.86
LSP1P1-201ENST00000599825 SMARCA4P51532 1647 aa19.76■□□□□ 0.75
LSP1P1-201ENST00000599825 ATAD2BQ9ULI0 1458 aa19.74■□□□□ 0.75
LSP1P1-201ENST00000599825 NCAPD3P42695 1498 aa19.72■□□□□ 0.75
LSP1P1-201ENST00000599825 SMARCA2P51531 1590 aa19.67■□□□□ 0.74
LSP1P1-201ENST00000599825 ERCC6Q03468 1493 aa19.67■□□□□ 0.74
LSP1P1-201ENST00000599825 BAZ1AQ9NRL2 1556 aaPredicted RBP19.64■□□□□ 0.73
LSP1P1-201ENST00000599825 HMGXB3Q12766 1538 aa19.61■□□□□ 0.73
LSP1P1-201ENST00000599825 BAZ1BQ9UIG0 1483 aaKnown RBP19.6■□□□□ 0.73
LSP1P1-201ENST00000599825 NESP48681 1621 aa19.57■□□□□ 0.72
LSP1P1-201ENST00000599825 MROH2BQ7Z745 1585 aa19.54■□□□□ 0.72
LSP1P1-201ENST00000599825 CUX2O14529 1486 aa19.48■□□□□ 0.71
LSP1P1-201ENST00000599825 PEG3Q9GZU2 1588 aa19.45■□□□□ 0.7
LSP1P1-201ENST00000599825 DNAJC5Q9H3Z4 198 aa19.41■□□□□ 0.7
LSP1P1-201ENST00000599825 WIZO95785 1651 aa19.36■□□□□ 0.69
LSP1P1-201ENST00000599825 LAMC3Q9Y6N6 1575 aa19.32■□□□□ 0.68
LSP1P1-201ENST00000599825 KIF21AQ7Z4S6 1674 aa19.31■□□□□ 0.68
LSP1P1-201ENST00000599825 THOC2Q8NI27 1593 aaKnown RBP19.31■□□□□ 0.68
LSP1P1-201ENST00000599825 PDS5BQ9NTI5 1447 aa19.22■□□□□ 0.67
LSP1P1-201ENST00000599825 CADPSQ9ULU8 1353 aa19.17■□□□□ 0.66
LSP1P1-201ENST00000599825 RSF1Q96T23 1441 aaPredicted RBP19.11■□□□□ 0.65
LSP1P1-201ENST00000599825 MRC2Q9UBG0 1479 aa19.09■□□□□ 0.65
LSP1P1-201ENST00000599825 TOP2AP11388 1531 aaKnown RBP19.05■□□□□ 0.64
LSP1P1-201ENST00000599825 CEP164Q9UPV0 1460 aa19.04■□□□□ 0.64
LSP1P1-201ENST00000599825 FANCD2Q9BXW9 1451 aa19.03■□□□□ 0.64
LSP1P1-201ENST00000599825 WDR62O43379 1518 aa19.01■□□□□ 0.63
LSP1P1-201ENST00000599825 CFTRP13569 1480 aa18.95■□□□□ 0.62
LSP1P1-201ENST00000599825 URB2Q14146 1524 aaKnown RBP18.86■□□□□ 0.61
LSP1P1-201ENST00000599825 CCDC88BA6NC98 1476 aa18.84■□□□□ 0.61
LSP1P1-201ENST00000599825 PRDM2Q13029 1718 aa18.81■□□□□ 0.6
LSP1P1-201ENST00000599825 TRIM41Q8WV44 630 aa18.81■□□□□ 0.6
LSP1P1-201ENST00000599825 TOPBP1Q92547 1522 aa18.65■□□□□ 0.58
LSP1P1-201ENST00000599825 ZNF608Q9ULD9 1512 aaPredicted RBP18.65■□□□□ 0.58
LSP1P1-201ENST00000599825 IFT140Q96RY7 1462 aa18.61■□□□□ 0.57
LSP1P1-201ENST00000599825 OSCARQ8IYS5 282 aa18.61■□□□□ 0.57
LSP1P1-201ENST00000599825 DNMBPQ6XZF7 1577 aa18.59■□□□□ 0.57
LSP1P1-201ENST00000599825 EIF4G3O43432 1585 aaKnown RBP18.55■□□□□ 0.56
LSP1P1-201ENST00000599825 ABCC8Q09428 1581 aa18.51■□□□□ 0.55
LSP1P1-201ENST00000599825 AQRO60306 1485 aaKnown RBP eCLIP18.48■□□□□ 0.55
LSP1P1-201ENST00000599825 SUPT5HO00267 1087 aaKnown RBP18.48■□□□□ 0.55
LSP1P1-201ENST00000599825 POLA1P09884 1462 aaPredicted RBP18.46■□□□□ 0.55
LSP1P1-201ENST00000599825 TARBP1Q13395 1621 aaKnown RBP18.46■□□□□ 0.55
LSP1P1-201ENST00000599825 RAD54L2Q9Y4B4 1467 aa18.46■□□□□ 0.54
LSP1P1-201ENST00000599825 FBLN2P98095 1184 aa18.45■□□□□ 0.54
LSP1P1-201ENST00000599825 RIMBP3CA6NJZ7 1639 aa18.44■□□□□ 0.54
LSP1P1-201ENST00000599825 RIMBP3BA6NNM3 1639 aa18.44■□□□□ 0.54
LSP1P1-201ENST00000599825 RIMBP3Q9UFD9 1639 aa18.44■□□□□ 0.54
LSP1P1-201ENST00000599825 CHD1O14646 1710 aa18.43■□□□□ 0.54
LSP1P1-201ENST00000599825 FGD5Q6ZNL6 1462 aa18.39■□□□□ 0.54
LSP1P1-201ENST00000599825 TDRD9Q8NDG6 1382 aaKnown RBP18.39■□□□□ 0.53
LSP1P1-201ENST00000599825 SOGA1O94964 1423 aa18.39■□□□□ 0.53
LSP1P1-201ENST00000599825 ARHGEF11O15085 1522 aa18.37■□□□□ 0.53
LSP1P1-201ENST00000599825 CUX1P39880 1505 aa18.36■□□□□ 0.53
LSP1P1-201ENST00000599825 SNAPC4Q5SXM2 1469 aa18.32■□□□□ 0.52
LSP1P1-201ENST00000599825 CYB5RLQ6IPT4 315 aa18.27■□□□□ 0.52
LSP1P1-201ENST00000599825 CHMP7Q8WUX9 453 aaPredicted RBP18.22■□□□□ 0.51
LSP1P1-201ENST00000599825 WDR97A6NE52 1622 aa18.22■□□□□ 0.51
LSP1P1-201ENST00000599825 GRIN2BQ13224 1484 aa18.2■□□□□ 0.5
LSP1P1-201ENST00000599825 PBRM1Q86U86 1689 aa18.2■□□□□ 0.5
LSP1P1-201ENST00000599825 ARAP1Q96P48 1450 aa18.2■□□□□ 0.5
LSP1P1-201ENST00000599825 MAGI1Q96QZ7 1491 aaPredicted RBP18.17■□□□□ 0.5
LSP1P1-201ENST00000599825 GAPVD1Q14C86 1478 aa18.16■□□□□ 0.5
LSP1P1-201ENST00000599825 SYNJ1O43426 1573 aa18.16■□□□□ 0.5
LSP1P1-201ENST00000599825 SYNJ2O15056 1496 aa18.14■□□□□ 0.49
LSP1P1-201ENST00000599825 CLASP1Q7Z460 1538 aa18.13■□□□□ 0.49
LSP1P1-201ENST00000599825 TRHP20396 242 aaPredicted RBP18.13■□□□□ 0.49
LSP1P1-201ENST00000599825 ABCA5Q8WWZ7 1642 aa18.11■□□□□ 0.49
LSP1P1-201ENST00000599825 ABCA10Q8WWZ4 1543 aa18.1■□□□□ 0.49
LSP1P1-201ENST00000599825 WRNQ14191 1432 aaPredicted RBP eCLIP18.07■□□□□ 0.48
LSP1P1-201ENST00000599825 TOP2BQ02880 1626 aa18.05■□□□□ 0.48
LSP1P1-201ENST00000599825 BIVM-ERCC5R4GMW8 1640 aa18.05■□□□□ 0.48
LSP1P1-201ENST00000599825 ADAMTS12P58397 1594 aa18■□□□□ 0.47
LSP1P1-201ENST00000599825 GRIN2AQ12879 1464 aa17.99■□□□□ 0.47
LSP1P1-201ENST00000599825 CEP170Q5SW79 1584 aa17.96■□□□□ 0.46
LSP1P1-201ENST00000599825 ERCC6L2Q5T890 1561 aa17.95■□□□□ 0.46
LSP1P1-201ENST00000599825 FHAD1B1AJZ9 1412 aa17.9■□□□□ 0.46
LSP1P1-201ENST00000599825 ERICH3Q5RHP9 1530 aa17.88■□□□□ 0.45
LSP1P1-201ENST00000599825 NUP160Q12769 1436 aa17.87■□□□□ 0.45
LSP1P1-201ENST00000599825 SHROOM2Q13796 1616 aa17.79■□□□□ 0.44
LSP1P1-201ENST00000599825 PRG4Q92954 1404 aaPredicted RBP17.78■□□□□ 0.44
LSP1P1-201ENST00000599825 RUSC2Q8N2Y8 1516 aa17.75■□□□□ 0.43
LSP1P1-201ENST00000599825 JPH4Q96JJ6 628 aa17.71■□□□□ 0.43
LSP1P1-201ENST00000599825 KIF27Q86VH2 1401 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms