RNA–Protein interactions for RNA: ENST00000599770.1

AC243960.3-202, humanhuman

TSL 4 BASIC

Gene AC243960.3, Length 594 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC243960.3-202ENST00000599770 NISCHQ9Y2I1 1504 aa14.37□□□□□ -0.11
AC243960.3-202ENST00000599770 CHIC1Q5VXU3 224 aa13.86□□□□□ -0.19
AC243960.3-202ENST00000599770 AEBP2Q6ZN18 517 aaPredicted RBP13.69□□□□□ -0.22
AC243960.3-202ENST00000599770 CCDC180Q9P1Z9 1646 aa12.55□□□□□ -0.4
AC243960.3-202ENST00000599770 PHF23Q9BUL5 403 aaPredicted RBP12.35□□□□□ -0.43
AC243960.3-202ENST00000599770 ZCCHC6Q5VYS8 1495 aaKnown RBP12.1□□□□□ -0.47
AC243960.3-202ENST00000599770 DCAF1Q9Y4B6 1507 aa11.91□□□□□ -0.5
AC243960.3-202ENST00000599770 ABCC9O60706 1549 aa11.77□□□□□ -0.52
AC243960.3-202ENST00000599770 MYO15BQ96JP2 1530 aa11.77□□□□□ -0.52
AC243960.3-202ENST00000599770 DCAF8L2P0C7V8 631 aa11.73□□□□□ -0.53
AC243960.3-202ENST00000599770 SHROOM4Q9ULL8 1493 aa11.67□□□□□ -0.54
AC243960.3-202ENST00000599770 NACADO15069 1562 aa11.67□□□□□ -0.54
AC243960.3-202ENST00000599770 RB1CC1Q8TDY2 1594 aa11.54□□□□□ -0.56
AC243960.3-202ENST00000599770 SCRIBQ14160 1630 aa11.5□□□□□ -0.57
AC243960.3-202ENST00000599770 PLPPR3Q6T4P5 718 aa11.46□□□□□ -0.57
AC243960.3-202ENST00000599770 SENP3Q9H4L4 574 aaPredicted RBP11.37□□□□□ -0.59
AC243960.3-202ENST00000599770 UNC13AQ9UPW8 1703 aa11.31□□□□□ -0.6
AC243960.3-202ENST00000599770 SUPT5HO00267 1087 aaKnown RBP11.22□□□□□ -0.61
AC243960.3-202ENST00000599770 BICRAQ9NZM4 1560 aa11.21□□□□□ -0.61
AC243960.3-202ENST00000599770 RSF1Q96T23 1441 aaPredicted RBP11.15□□□□□ -0.62
AC243960.3-202ENST00000599770 CECR2Q9BXF3 1484 aa11.14□□□□□ -0.63
AC243960.3-202ENST00000599770 MROH2BQ7Z745 1585 aa11.1□□□□□ -0.63
AC243960.3-202ENST00000599770 BAZ1AQ9NRL2 1556 aaPredicted RBP11.1□□□□□ -0.63
AC243960.3-202ENST00000599770 PABPN1Q86U42 306 aaKnown RBP eCLIP11.07□□□□□ -0.64
AC243960.3-202ENST00000599770 SMARCA4P51532 1647 aa11.05□□□□□ -0.64
AC243960.3-202ENST00000599770 WIZO95785 1651 aa11□□□□□ -0.65
AC243960.3-202ENST00000599770 PEG3Q9GZU2 1588 aa10.93□□□□□ -0.66
AC243960.3-202ENST00000599770 TOP2AP11388 1531 aaKnown RBP10.92□□□□□ -0.66
AC243960.3-202ENST00000599770 ADRA2BP18089 450 aa10.86□□□□□ -0.67
AC243960.3-202ENST00000599770 SMARCA2P51531 1590 aa10.86□□□□□ -0.67
AC243960.3-202ENST00000599770 EIF4G1Q04637 1599 aaKnown RBP10.86□□□□□ -0.67
AC243960.3-202ENST00000599770 ATAD2BQ9ULI0 1458 aa10.85□□□□□ -0.67
AC243960.3-202ENST00000599770 BAZ1BQ9UIG0 1483 aaKnown RBP10.78□□□□□ -0.68
AC243960.3-202ENST00000599770 CCDC88BA6NC98 1476 aa10.77□□□□□ -0.69
AC243960.3-202ENST00000599770 HMGXB3Q12766 1538 aa10.77□□□□□ -0.69
AC243960.3-202ENST00000599770 NCAPD3P42695 1498 aa10.75□□□□□ -0.69
AC243960.3-202ENST00000599770 KCNA4P22459 653 aa10.72□□□□□ -0.69
AC243960.3-202ENST00000599770 PPP6R1Q9UPN7 881 aa10.71□□□□□ -0.69
AC243960.3-202ENST00000599770 EHMT2Q96KQ7 1210 aa10.69□□□□□ -0.7
AC243960.3-202ENST00000599770 CC2D2AQ9P2K1 1620 aa10.68□□□□□ -0.7
AC243960.3-202ENST00000599770 FOXD1Q16676 465 aa10.58□□□□□ -0.72
AC243960.3-202ENST00000599770 TRIM41Q8WV44 630 aa10.56□□□□□ -0.72
AC243960.3-202ENST00000599770 ABCC8Q09428 1581 aa10.55□□□□□ -0.72
AC243960.3-202ENST00000599770 CFTRP13569 1480 aa10.52□□□□□ -0.73
AC243960.3-202ENST00000599770 WRNQ14191 1432 aaPredicted RBP eCLIP10.5□□□□□ -0.73
AC243960.3-202ENST00000599770 PRDM2Q13029 1718 aa10.49□□□□□ -0.73
AC243960.3-202ENST00000599770 CADPSQ9ULU8 1353 aa10.46□□□□□ -0.74
AC243960.3-202ENST00000599770 SYNJ1O43426 1573 aa10.46□□□□□ -0.74
AC243960.3-202ENST00000599770 TOP2BQ02880 1626 aa10.42□□□□□ -0.74
AC243960.3-202ENST00000599770 BIVM-ERCC5R4GMW8 1640 aa10.42□□□□□ -0.74
AC243960.3-202ENST00000599770 LAMC3Q9Y6N6 1575 aa10.39□□□□□ -0.75
AC243960.3-202ENST00000599770 CUX1P39880 1505 aa10.38□□□□□ -0.75
AC243960.3-202ENST00000599770 EEA1Q15075 1411 aa10.37□□□□□ -0.75
AC243960.3-202ENST00000599770 NESP48681 1621 aa10.36□□□□□ -0.75
AC243960.3-202ENST00000599770 FANCD2Q9BXW9 1451 aa10.36□□□□□ -0.75
AC243960.3-202ENST00000599770 FAM9AQ8IZU1 332 aaPredicted RBP10.35□□□□□ -0.75
AC243960.3-202ENST00000599770 DNAJC5BQ9UF47 199 aa10.35□□□□□ -0.75
AC243960.3-202ENST00000599770 SOGA1O94964 1423 aa10.34□□□□□ -0.75
AC243960.3-202ENST00000599770 LOC105371045A0A1W2PR82 267 aa10.34□□□□□ -0.75
AC243960.3-202ENST00000599770 CSRNP3Q8WYN3 585 aa10.32□□□□□ -0.76
AC243960.3-202ENST00000599770 RUSC2Q8N2Y8 1516 aa10.31□□□□□ -0.76
AC243960.3-202ENST00000599770 CEP164Q9UPV0 1460 aa10.3□□□□□ -0.76
AC243960.3-202ENST00000599770 DNMBPQ6XZF7 1577 aa10.29□□□□□ -0.76
AC243960.3-202ENST00000599770 PDS5BQ9NTI5 1447 aa10.28□□□□□ -0.76
AC243960.3-202ENST00000599770 FGD5Q6ZNL6 1462 aa10.26□□□□□ -0.77
AC243960.3-202ENST00000599770 TOPBP1Q92547 1522 aa10.26□□□□□ -0.77
AC243960.3-202ENST00000599770 SLC4A1APQ9BWU0 796 aaKnown RBP10.25□□□□□ -0.77
AC243960.3-202ENST00000599770 KIF21BO75037 1637 aa10.25□□□□□ -0.77
AC243960.3-202ENST00000599770 KIF21AQ7Z4S6 1674 aa10.25□□□□□ -0.77
AC243960.3-202ENST00000599770 URB2Q14146 1524 aaKnown RBP10.23□□□□□ -0.77
AC243960.3-202ENST00000599770 GOLGA3Q08378 1498 aa10.23□□□□□ -0.77
AC243960.3-202ENST00000599770 PPP4R3CPQ6ZMV5 832 aa10.22□□□□□ -0.77
AC243960.3-202ENST00000599770 KIF27Q86VH2 1401 aa10.22□□□□□ -0.77
AC243960.3-202ENST00000599770 POLA1P09884 1462 aaPredicted RBP10.21□□□□□ -0.78
AC243960.3-202ENST00000599770 CUX2O14529 1486 aa10.19□□□□□ -0.78
AC243960.3-202ENST00000599770 TNIKQ9UKE5 1360 aa10.19□□□□□ -0.78
AC243960.3-202ENST00000599770 ERICH3Q5RHP9 1530 aa10.17□□□□□ -0.78
AC243960.3-202ENST00000599770 ABCA10Q8WWZ4 1543 aa10.17□□□□□ -0.78
AC243960.3-202ENST00000599770 PRXQ9BXM0 1461 aa10.17□□□□□ -0.78
AC243960.3-202ENST00000599770 MRC2Q9UBG0 1479 aa10.17□□□□□ -0.78
AC243960.3-202ENST00000599770 WDR97A6NE52 1622 aa10.17□□□□□ -0.78
AC243960.3-202ENST00000599770 RAPGEF2Q9Y4G8 1499 aa10.16□□□□□ -0.78
AC243960.3-202ENST00000599770 RAD54L2Q9Y4B4 1467 aa10.15□□□□□ -0.78
AC243960.3-202ENST00000599770 WDR62O43379 1518 aa10.13□□□□□ -0.79
AC243960.3-202ENST00000599770 CEP162Q5TB80 1403 aa10.13□□□□□ -0.79
AC243960.3-202ENST00000599770 IGF1RP08069 1367 aa10.11□□□□□ -0.79
AC243960.3-202ENST00000599770 TARBP1Q13395 1621 aaKnown RBP10.11□□□□□ -0.79
AC243960.3-202ENST00000599770 ABCA5Q8WWZ7 1642 aa10.11□□□□□ -0.79
AC243960.3-202ENST00000599770 UBTFP17480 764 aaKnown RBP10.1□□□□□ -0.79
AC243960.3-202ENST00000599770 ERCC6Q03468 1493 aa10.1□□□□□ -0.79
AC243960.3-202ENST00000599770 THOC2Q8NI27 1593 aaKnown RBP10.09□□□□□ -0.79
AC243960.3-202ENST00000599770 CUL7Q14999 1698 aa10.07□□□□□ -0.8
AC243960.3-202ENST00000599770 PIAS4Q8N2W9 510 aaPredicted RBP10.07□□□□□ -0.8
AC243960.3-202ENST00000599770 CARMIL1Q5VZK9 1371 aa10.06□□□□□ -0.8
AC243960.3-202ENST00000599770 IFT140Q96RY7 1462 aa10.05□□□□□ -0.8
AC243960.3-202ENST00000599770 CLIP1P30622 1438 aa10.05□□□□□ -0.8
AC243960.3-202ENST00000599770 GAPVD1Q14C86 1478 aa10.04□□□□□ -0.8
AC243960.3-202ENST00000599770 TDRD9Q8NDG6 1382 aaKnown RBP10.03□□□□□ -0.8
AC243960.3-202ENST00000599770 NCBP3Q53F19 620 aaKnown RBP10.02□□□□□ -0.81
AC243960.3-202ENST00000599770 NPM3O75607 178 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms