RNA–Protein interactions for RNA: ENST00000599748.5

SPHK2-210, Transcript of sphingosine kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPHK2, Length 2,683 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK2-210ENST00000599748 NISCHQ9Y2I1 1504 aa31.21■■■□□ 2.59
SPHK2-210ENST00000599748 CCDC180Q9P1Z9 1646 aa27.44■■□□□ 1.98
SPHK2-210ENST00000599748 ABCC9O60706 1549 aa26.68■■□□□ 1.86
SPHK2-210ENST00000599748 SHROOM4Q9ULL8 1493 aa26.22■■□□□ 1.79
SPHK2-210ENST00000599748 ZCCHC6Q5VYS8 1495 aaKnown RBP26.16■■□□□ 1.78
SPHK2-210ENST00000599748 DCAF8L2P0C7V8 631 aa26.09■■□□□ 1.77
SPHK2-210ENST00000599748 SUPT5HO00267 1087 aaKnown RBP26.01■■□□□ 1.75
SPHK2-210ENST00000599748 HRCP23327 699 aa25.89■■□□□ 1.74
SPHK2-210ENST00000599748 NACADO15069 1562 aa25.76■■□□□ 1.71
SPHK2-210ENST00000599748 DCAF1Q9Y4B6 1507 aa25.76■■□□□ 1.71
SPHK2-210ENST00000599748 MYO15BQ96JP2 1530 aa25.71■■□□□ 1.71
SPHK2-210ENST00000599748 RB1CC1Q8TDY2 1594 aa25.7■■□□□ 1.7
SPHK2-210ENST00000599748 PCGF6Q9BYE7 350 aa25.55■■□□□ 1.68
SPHK2-210ENST00000599748 PPARGC1BQ86YN6 1023 aaKnown RBP25.51■■□□□ 1.67
SPHK2-210ENST00000599748 CHIC1Q5VXU3 224 aa25.46■■□□□ 1.67
SPHK2-210ENST00000599748 SCRIBQ14160 1630 aa25.21■■□□□ 1.63
SPHK2-210ENST00000599748 UNC13AQ9UPW8 1703 aa25.14■■□□□ 1.62
SPHK2-210ENST00000599748 PABPN1Q86U42 306 aaKnown RBP eCLIP25.09■■□□□ 1.61
SPHK2-210ENST00000599748 BICRAQ9NZM4 1560 aa24.99■■□□□ 1.59
SPHK2-210ENST00000599748 LOC105371045A0A1W2PR82 267 aa24.93■■□□□ 1.58
SPHK2-210ENST00000599748 TRIM26Q12899 539 aaPredicted RBP24.69■■□□□ 1.54
SPHK2-210ENST00000599748 PELP1Q8IZL8 1130 aaKnown RBP24.47■■□□□ 1.51
SPHK2-210ENST00000599748 SCAF1Q9H7N4 1312 aaKnown RBP24.44■■□□□ 1.5
SPHK2-210ENST00000599748 CECR2Q9BXF3 1484 aa24.37■■□□□ 1.49
SPHK2-210ENST00000599748 ZEB1P37275 1124 aaPredicted RBP24.32■■□□□ 1.48
SPHK2-210ENST00000599748 RSF1Q96T23 1441 aaPredicted RBP24.3■■□□□ 1.48
SPHK2-210ENST00000599748 EIF4G1Q04637 1599 aaKnown RBP24.27■■□□□ 1.48
SPHK2-210ENST00000599748 DNAJC5BQ9UF47 199 aa24.27■■□□□ 1.48
SPHK2-210ENST00000599748 MROH2BQ7Z745 1585 aa24.15■■□□□ 1.46
SPHK2-210ENST00000599748 BAZ1AQ9NRL2 1556 aaPredicted RBP24.12■■□□□ 1.45
SPHK2-210ENST00000599748 SMARCA4P51532 1647 aa24.11■■□□□ 1.45
SPHK2-210ENST00000599748 CC2D2AQ9P2K1 1620 aa24.09■■□□□ 1.45
SPHK2-210ENST00000599748 FAM9AQ8IZU1 332 aaPredicted RBP24.07■■□□□ 1.44
SPHK2-210ENST00000599748 EHMT2Q96KQ7 1210 aa24.04■■□□□ 1.44
SPHK2-210ENST00000599748 TRIM41Q8WV44 630 aa24■■□□□ 1.43
SPHK2-210ENST00000599748 WIZO95785 1651 aa23.99■■□□□ 1.43
SPHK2-210ENST00000599748 ATAD2BQ9ULI0 1458 aa23.93■■□□□ 1.42
SPHK2-210ENST00000599748 NEUROD1Q13562 356 aa23.85■■□□□ 1.41
SPHK2-210ENST00000599748 ACIN1Q9UKV3 1341 aaKnown RBP23.84■■□□□ 1.41
SPHK2-210ENST00000599748 SMARCA2P51531 1590 aa23.83■■□□□ 1.41
SPHK2-210ENST00000599748 PEG3Q9GZU2 1588 aa23.83■■□□□ 1.41
SPHK2-210ENST00000599748 NCAPD3P42695 1498 aa23.83■■□□□ 1.41
SPHK2-210ENST00000599748 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.77■■□□□ 1.4
SPHK2-210ENST00000599748 BAZ1BQ9UIG0 1483 aaKnown RBP23.72■■□□□ 1.39
SPHK2-210ENST00000599748 HMGXB3Q12766 1538 aa23.68■■□□□ 1.38
SPHK2-210ENST00000599748 GTF3C3Q9Y5Q9 886 aa23.68■■□□□ 1.38
SPHK2-210ENST00000599748 CCER1Q8TC90 406 aaPredicted RBP23.66■■□□□ 1.38
SPHK2-210ENST00000599748 TOP2AP11388 1531 aaKnown RBP23.58■■□□□ 1.36
SPHK2-210ENST00000599748 DIEXFQ68CQ4 756 aaKnown RBP23.57■■□□□ 1.36
SPHK2-210ENST00000599748 CENPBP07199 599 aaPredicted RBP23.5■■□□□ 1.35
SPHK2-210ENST00000599748 CCDC88BA6NC98 1476 aa23.46■■□□□ 1.35
SPHK2-210ENST00000599748 TTBK1Q5TCY1 1321 aaPredicted RBP23.42■■□□□ 1.34
SPHK2-210ENST00000599748 MYT1Q01538 1121 aa23.37■■□□□ 1.33
SPHK2-210ENST00000599748 YTHDC1Q96MU7 727 aaKnown RBP23.26■■□□□ 1.31
SPHK2-210ENST00000599748 NESP48681 1621 aa23.23■■□□□ 1.31
SPHK2-210ENST00000599748 CADPSQ9ULU8 1353 aa23.19■■□□□ 1.3
SPHK2-210ENST00000599748 ZNF316A6NFI3 1004 aaPredicted RBP23.14■■□□□ 1.29
SPHK2-210ENST00000599748 ABCC8Q09428 1581 aa23.14■■□□□ 1.29
SPHK2-210ENST00000599748 CFTRP13569 1480 aa23.11■■□□□ 1.29
SPHK2-210ENST00000599748 LAMC3Q9Y6N6 1575 aa23.08■■□□□ 1.28
SPHK2-210ENST00000599748 WRNQ14191 1432 aaPredicted RBP eCLIP23.04■■□□□ 1.28
SPHK2-210ENST00000599748 MIER1Q8N108 512 aa23.04■■□□□ 1.28
SPHK2-210ENST00000599748 CEP162Q5TB80 1403 aa23.02■■□□□ 1.28
SPHK2-210ENST00000599748 PDS5BQ9NTI5 1447 aa22.95■■□□□ 1.26
SPHK2-210ENST00000599748 FANCD2Q9BXW9 1451 aa22.9■■□□□ 1.26
SPHK2-210ENST00000599748 ERCC6Q03468 1493 aa22.9■■□□□ 1.26
SPHK2-210ENST00000599748 SOGA1O94964 1423 aa22.87■■□□□ 1.25
SPHK2-210ENST00000599748 KIF21AQ7Z4S6 1674 aa22.86■■□□□ 1.25
SPHK2-210ENST00000599748 TNIKQ9UKE5 1360 aa22.83■■□□□ 1.24
SPHK2-210ENST00000599748 HNRNPUL2Q1KMD3 747 aaKnown RBP22.83■■□□□ 1.24
SPHK2-210ENST00000599748 PRDM2Q13029 1718 aa22.82■■□□□ 1.24
SPHK2-210ENST00000599748 UBTFP17480 764 aaKnown RBP22.82■■□□□ 1.24
SPHK2-210ENST00000599748 CEP164Q9UPV0 1460 aa22.8■■□□□ 1.24
SPHK2-210ENST00000599748 SYNJ1O43426 1573 aa22.78■■□□□ 1.24
SPHK2-210ENST00000599748 RUSC2Q8N2Y8 1516 aa22.77■■□□□ 1.24
SPHK2-210ENST00000599748 CSRNP3Q8WYN3 585 aa22.71■■□□□ 1.23
SPHK2-210ENST00000599748 MRC2Q9UBG0 1479 aa22.69■■□□□ 1.22
SPHK2-210ENST00000599748 THOC2Q8NI27 1593 aaKnown RBP22.68■■□□□ 1.22
SPHK2-210ENST00000599748 URB2Q14146 1524 aaKnown RBP22.67■■□□□ 1.22
SPHK2-210ENST00000599748 WDR62O43379 1518 aa22.59■■□□□ 1.21
SPHK2-210ENST00000599748 CUX1P39880 1505 aa22.58■■□□□ 1.21
SPHK2-210ENST00000599748 TOPBP1Q92547 1522 aa22.58■■□□□ 1.21
SPHK2-210ENST00000599748 SUPT16HQ9Y5B9 1047 aaKnown RBP22.58■■□□□ 1.2
SPHK2-210ENST00000599748 GOLGA3Q08378 1498 aa22.58■■□□□ 1.2
SPHK2-210ENST00000599748 TOP2BQ02880 1626 aa22.56■■□□□ 1.2
SPHK2-210ENST00000599748 EEA1Q15075 1411 aa22.54■■□□□ 1.2
SPHK2-210ENST00000599748 DNMBPQ6XZF7 1577 aa22.54■■□□□ 1.2
SPHK2-210ENST00000599748 BIVM-ERCC5R4GMW8 1640 aa22.5■■□□□ 1.19
SPHK2-210ENST00000599748 CUX2O14529 1486 aa22.46■■□□□ 1.19
SPHK2-210ENST00000599748 FGD5Q6ZNL6 1462 aa22.43■■□□□ 1.18
SPHK2-210ENST00000599748 RANGAP1P46060 587 aaPredicted RBP22.43■■□□□ 1.18
SPHK2-210ENST00000599748 TSHZ2Q9NRE2 1034 aa22.43■■□□□ 1.18
SPHK2-210ENST00000599748 POLA1P09884 1462 aaPredicted RBP22.43■■□□□ 1.18
SPHK2-210ENST00000599748 CLIP1P30622 1438 aa22.42■■□□□ 1.18
SPHK2-210ENST00000599748 RAD54L2Q9Y4B4 1467 aa22.39■■□□□ 1.17
SPHK2-210ENST00000599748 VPS8Q8N3P4 1428 aa22.36■■□□□ 1.17
SPHK2-210ENST00000599748 APLP2Q06481 763 aa22.36■■□□□ 1.17
SPHK2-210ENST00000599748 CLSPNQ9HAW4 1339 aa22.35■■□□□ 1.17
SPHK2-210ENST00000599748 ANP32EQ9BTT0 268 aa22.32■■□□□ 1.16
SPHK2-210ENST00000599748 DHX57Q6P158 1386 aaKnown RBP22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms