RNA–Protein interactions for RNA: ENST00000599539.5

RPS16-204, Transcript of ribosomal protein S16, humanhuman

TSL 2 BASIC

Gene RPS16, Length 555 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS16-204ENST00000599539 NISCHQ9Y2I1 1504 aa24.45■■□□□ 1.51
RPS16-204ENST00000599539 ABCC9O60706 1549 aa21.87■■□□□ 1.09
RPS16-204ENST00000599539 CCDC180Q9P1Z9 1646 aa21.84■■□□□ 1.09
RPS16-204ENST00000599539 RB1CC1Q8TDY2 1594 aa20.78■□□□□ 0.92
RPS16-204ENST00000599539 NACADO15069 1562 aa20.67■□□□□ 0.9
RPS16-204ENST00000599539 DCAF8L2P0C7V8 631 aa20.59■□□□□ 0.89
RPS16-204ENST00000599539 DNAJC5BQ9UF47 199 aa20.55■□□□□ 0.88
RPS16-204ENST00000599539 MYO15BQ96JP2 1530 aa20.43■□□□□ 0.86
RPS16-204ENST00000599539 PABPN1Q86U42 306 aaKnown RBP eCLIP20.4■□□□□ 0.86
RPS16-204ENST00000599539 UNC13AQ9UPW8 1703 aa20.28■□□□□ 0.84
RPS16-204ENST00000599539 ZCCHC6Q5VYS8 1495 aaKnown RBP20.28■□□□□ 0.84
RPS16-204ENST00000599539 BICRAQ9NZM4 1560 aa20.25■□□□□ 0.83
RPS16-204ENST00000599539 DCAF1Q9Y4B6 1507 aa20.18■□□□□ 0.82
RPS16-204ENST00000599539 SCRIBQ14160 1630 aa19.94■□□□□ 0.78
RPS16-204ENST00000599539 SHROOM4Q9ULL8 1493 aa19.92■□□□□ 0.78
RPS16-204ENST00000599539 CC2D2AQ9P2K1 1620 aa19.73■□□□□ 0.75
RPS16-204ENST00000599539 EIF4G1Q04637 1599 aaKnown RBP19.7■□□□□ 0.74
RPS16-204ENST00000599539 CECR2Q9BXF3 1484 aa19.68■□□□□ 0.74
RPS16-204ENST00000599539 NCAPD3P42695 1498 aa19.13■□□□□ 0.65
RPS16-204ENST00000599539 ATAD2BQ9ULI0 1458 aa19.09■□□□□ 0.65
RPS16-204ENST00000599539 SMARCA4P51532 1647 aa19.03■□□□□ 0.64
RPS16-204ENST00000599539 SMARCA2P51531 1590 aa18.97■□□□□ 0.63
RPS16-204ENST00000599539 HMGXB3Q12766 1538 aa18.95■□□□□ 0.62
RPS16-204ENST00000599539 BAZ1AQ9NRL2 1556 aaPredicted RBP18.93■□□□□ 0.62
RPS16-204ENST00000599539 MROH2BQ7Z745 1585 aa18.86■□□□□ 0.61
RPS16-204ENST00000599539 PEG3Q9GZU2 1588 aa18.86■□□□□ 0.61
RPS16-204ENST00000599539 BAZ1BQ9UIG0 1483 aaKnown RBP18.85■□□□□ 0.61
RPS16-204ENST00000599539 ERCC6Q03468 1493 aa18.82■□□□□ 0.6
RPS16-204ENST00000599539 NESP48681 1621 aa18.82■□□□□ 0.6
RPS16-204ENST00000599539 CUX2O14529 1486 aa18.78■□□□□ 0.6
RPS16-204ENST00000599539 DNAJC5Q9H3Z4 198 aa18.77■□□□□ 0.6
RPS16-204ENST00000599539 LAMC3Q9Y6N6 1575 aa18.63■□□□□ 0.57
RPS16-204ENST00000599539 WIZO95785 1651 aa18.6■□□□□ 0.57
RPS16-204ENST00000599539 THOC2Q8NI27 1593 aaKnown RBP18.58■□□□□ 0.56
RPS16-204ENST00000599539 CADPSQ9ULU8 1353 aa18.55■□□□□ 0.56
RPS16-204ENST00000599539 PDS5BQ9NTI5 1447 aa18.54■□□□□ 0.56
RPS16-204ENST00000599539 RSF1Q96T23 1441 aaPredicted RBP18.5■□□□□ 0.55
RPS16-204ENST00000599539 KIF21AQ7Z4S6 1674 aa18.5■□□□□ 0.55
RPS16-204ENST00000599539 MRC2Q9UBG0 1479 aa18.39■□□□□ 0.53
RPS16-204ENST00000599539 TOP2AP11388 1531 aaKnown RBP18.37■□□□□ 0.53
RPS16-204ENST00000599539 WDR62O43379 1518 aa18.34■□□□□ 0.53
RPS16-204ENST00000599539 CFTRP13569 1480 aa18.34■□□□□ 0.53
RPS16-204ENST00000599539 FANCD2Q9BXW9 1451 aa18.32■□□□□ 0.52
RPS16-204ENST00000599539 CEP164Q9UPV0 1460 aa18.3■□□□□ 0.52
RPS16-204ENST00000599539 CCDC88BA6NC98 1476 aa18.2■□□□□ 0.5
RPS16-204ENST00000599539 URB2Q14146 1524 aaKnown RBP18.19■□□□□ 0.5
RPS16-204ENST00000599539 PRDM2Q13029 1718 aa18.03■□□□□ 0.48
RPS16-204ENST00000599539 TOPBP1Q92547 1522 aa17.98■□□□□ 0.47
RPS16-204ENST00000599539 ZNF608Q9ULD9 1512 aaPredicted RBP17.97■□□□□ 0.47
RPS16-204ENST00000599539 IFT140Q96RY7 1462 aa17.95■□□□□ 0.46
RPS16-204ENST00000599539 OSCARQ8IYS5 282 aa17.95■□□□□ 0.46
RPS16-204ENST00000599539 TRIM41Q8WV44 630 aa17.94■□□□□ 0.46
RPS16-204ENST00000599539 ABCC8Q09428 1581 aa17.9■□□□□ 0.46
RPS16-204ENST00000599539 DNMBPQ6XZF7 1577 aa17.9■□□□□ 0.46
RPS16-204ENST00000599539 TARBP1Q13395 1621 aaKnown RBP17.81■□□□□ 0.44
RPS16-204ENST00000599539 EIF4G3O43432 1585 aaKnown RBP17.81■□□□□ 0.44
RPS16-204ENST00000599539 AQRO60306 1485 aaKnown RBP eCLIP17.81■□□□□ 0.443e-15■■■■□ 21.7
RPS16-204ENST00000599539 POLA1P09884 1462 aaPredicted RBP17.81■□□□□ 0.44
RPS16-204ENST00000599539 RAD54L2Q9Y4B4 1467 aa17.77■□□□□ 0.44
RPS16-204ENST00000599539 SOGA1O94964 1423 aa17.72■□□□□ 0.43
RPS16-204ENST00000599539 CUX1P39880 1505 aa17.71■□□□□ 0.43
RPS16-204ENST00000599539 FGD5Q6ZNL6 1462 aa17.7■□□□□ 0.42
RPS16-204ENST00000599539 TDRD9Q8NDG6 1382 aaKnown RBP17.7■□□□□ 0.42
RPS16-204ENST00000599539 RIMBP3CA6NJZ7 1639 aa17.7■□□□□ 0.42
RPS16-204ENST00000599539 RIMBP3BA6NNM3 1639 aa17.7■□□□□ 0.42
RPS16-204ENST00000599539 RIMBP3Q9UFD9 1639 aa17.7■□□□□ 0.42
RPS16-204ENST00000599539 SUPT5HO00267 1087 aaKnown RBP17.69■□□□□ 0.42
RPS16-204ENST00000599539 ARHGEF11O15085 1522 aa17.67■□□□□ 0.42
RPS16-204ENST00000599539 FBLN2P98095 1184 aa17.63■□□□□ 0.41
RPS16-204ENST00000599539 CHD1O14646 1710 aa17.63■□□□□ 0.41
RPS16-204ENST00000599539 SNAPC4Q5SXM2 1469 aa17.6■□□□□ 0.41
RPS16-204ENST00000599539 WDR97A6NE52 1622 aa17.58■□□□□ 0.41
RPS16-204ENST00000599539 GRIN2BQ13224 1484 aa17.55■□□□□ 0.4
RPS16-204ENST00000599539 CYB5RLQ6IPT4 315 aa17.54■□□□□ 0.4
RPS16-204ENST00000599539 MAGI1Q96QZ7 1491 aaPredicted RBP17.54■□□□□ 0.4
RPS16-204ENST00000599539 ARAP1Q96P48 1450 aa17.52■□□□□ 0.4
RPS16-204ENST00000599539 CHMP7Q8WUX9 453 aaPredicted RBP17.51■□□□□ 0.39
RPS16-204ENST00000599539 ABCA10Q8WWZ4 1543 aa17.51■□□□□ 0.39
RPS16-204ENST00000599539 CLASP1Q7Z460 1538 aa17.5■□□□□ 0.39
RPS16-204ENST00000599539 GAPVD1Q14C86 1478 aa17.5■□□□□ 0.39
RPS16-204ENST00000599539 SYNJ2O15056 1496 aa17.48■□□□□ 0.39
RPS16-204ENST00000599539 ABCA5Q8WWZ7 1642 aa17.46■□□□□ 0.39
RPS16-204ENST00000599539 SYNJ1O43426 1573 aa17.44■□□□□ 0.38
RPS16-204ENST00000599539 PBRM1Q86U86 1689 aa17.42■□□□□ 0.38
RPS16-204ENST00000599539 WRNQ14191 1432 aaPredicted RBP eCLIP17.42■□□□□ 0.385e-6■□□□□ 8.4
RPS16-204ENST00000599539 TOP2BQ02880 1626 aa17.39■□□□□ 0.38
RPS16-204ENST00000599539 BIVM-ERCC5R4GMW8 1640 aa17.39■□□□□ 0.37
RPS16-204ENST00000599539 GRIN2AQ12879 1464 aa17.33■□□□□ 0.37
RPS16-204ENST00000599539 ADAMTS12P58397 1594 aa17.32■□□□□ 0.36
RPS16-204ENST00000599539 NUP160Q12769 1436 aa17.3■□□□□ 0.36
RPS16-204ENST00000599539 TRHP20396 242 aaPredicted RBP17.29■□□□□ 0.36
RPS16-204ENST00000599539 FHAD1B1AJZ9 1412 aa17.29■□□□□ 0.36
RPS16-204ENST00000599539 CEP170Q5SW79 1584 aa17.27■□□□□ 0.35
RPS16-204ENST00000599539 ERCC6L2Q5T890 1561 aa17.27■□□□□ 0.35
RPS16-204ENST00000599539 ERICH3Q5RHP9 1530 aa17.26■□□□□ 0.35
RPS16-204ENST00000599539 SHROOM2Q13796 1616 aa17.18■□□□□ 0.34
RPS16-204ENST00000599539 IGF1RP08069 1367 aa17.12■□□□□ 0.33
RPS16-204ENST00000599539 JPH4Q96JJ6 628 aa17.11■□□□□ 0.33
RPS16-204ENST00000599539 PRG4Q92954 1404 aaPredicted RBP17.11■□□□□ 0.33
RPS16-204ENST00000599539 RUSC2Q8N2Y8 1516 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms