RNA–Protein interactions for RNA: ENST00000598999.1

HNRNPM-212, Transcript of heterogeneous nuclear ribonucleoprotein M, humanhuman

TSL 2

Gene HNRNPM, Length 409 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPM-212ENST00000598999 NISCHQ9Y2I1 1504 aa41.4■■■■■ 4.22
HNRNPM-212ENST00000598999 ABCC9O60706 1549 aa37.71■■■■□ 3.63
HNRNPM-212ENST00000598999 CCDC180Q9P1Z9 1646 aa37.23■■■■□ 3.55
HNRNPM-212ENST00000598999 DNAJC5BQ9UF47 199 aa35.81■■■■□ 3.32
HNRNPM-212ENST00000598999 RB1CC1Q8TDY2 1594 aa35.68■■■■□ 3.3
HNRNPM-212ENST00000598999 NACADO15069 1562 aa35.37■■■■□ 3.25
HNRNPM-212ENST00000598999 DCAF8L2P0C7V8 631 aa35.18■■■■□ 3.22
HNRNPM-212ENST00000598999 PABPN1Q86U42 306 aaKnown RBP eCLIP35.1■■■■□ 3.21
HNRNPM-212ENST00000598999 MYO15BQ96JP2 1530 aa34.8■■■■□ 3.16
HNRNPM-212ENST00000598999 UNC13AQ9UPW8 1703 aa34.72■■■■□ 3.15
HNRNPM-212ENST00000598999 BICRAQ9NZM4 1560 aa34.66■■■■□ 3.14
HNRNPM-212ENST00000598999 ZCCHC6Q5VYS8 1495 aaKnown RBP34.21■■■■□ 3.07
HNRNPM-212ENST00000598999 SHROOM4Q9ULL8 1493 aa34.2■■■■□ 3.06
HNRNPM-212ENST00000598999 DCAF1Q9Y4B6 1507 aa34.18■■■■□ 3.06
HNRNPM-212ENST00000598999 CECR2Q9BXF3 1484 aa34.02■■■■□ 3.04
HNRNPM-212ENST00000598999 CC2D2AQ9P2K1 1620 aa34■■■■□ 3.03
HNRNPM-212ENST00000598999 SCRIBQ14160 1630 aa33.91■■■■□ 3.02
HNRNPM-212ENST00000598999 EIF4G1Q04637 1599 aaKnown RBP33.85■■■■□ 3.01
HNRNPM-212ENST00000598999 DNAJC5Q9H3Z4 198 aa33.18■■■□□ 2.9
HNRNPM-212ENST00000598999 NCAPD3P42695 1498 aa32.72■■■□□ 2.83
HNRNPM-212ENST00000598999 CUX2O14529 1486 aa32.67■■■□□ 2.82
HNRNPM-212ENST00000598999 ERCC6Q03468 1493 aa32.58■■■□□ 2.81
HNRNPM-212ENST00000598999 ATAD2BQ9ULI0 1458 aa32.53■■■□□ 2.8
HNRNPM-212ENST00000598999 SMARCA2P51531 1590 aa32.38■■■□□ 2.77
HNRNPM-212ENST00000598999 HMGXB3Q12766 1538 aa32.36■■■□□ 2.77
HNRNPM-212ENST00000598999 SMARCA4P51532 1647 aa32.33■■■□□ 2.77
HNRNPM-212ENST00000598999 NESP48681 1621 aa32.27■■■□□ 2.76
HNRNPM-212ENST00000598999 BAZ1BQ9UIG0 1483 aaKnown RBP32.17■■■□□ 2.74
HNRNPM-212ENST00000598999 BAZ1AQ9NRL2 1556 aaPredicted RBP32.15■■■□□ 2.74
HNRNPM-212ENST00000598999 PEG3Q9GZU2 1588 aa32.05■■■□□ 2.72
HNRNPM-212ENST00000598999 THOC2Q8NI27 1593 aaKnown RBP31.97■■■□□ 2.71
HNRNPM-212ENST00000598999 LAMC3Q9Y6N6 1575 aa31.96■■■□□ 2.71
HNRNPM-212ENST00000598999 MROH2BQ7Z745 1585 aa31.89■■■□□ 2.7
HNRNPM-212ENST00000598999 PDS5BQ9NTI5 1447 aa31.86■■■□□ 2.69
HNRNPM-212ENST00000598999 KIF21AQ7Z4S6 1674 aa31.73■■■□□ 2.67
HNRNPM-212ENST00000598999 CADPSQ9ULU8 1353 aa31.71■■■□□ 2.67
HNRNPM-212ENST00000598999 MRC2Q9UBG0 1479 aa31.57■■■□□ 2.64
HNRNPM-212ENST00000598999 TRIM41Q8WV44 630 aa31.51■■■□□ 2.63
HNRNPM-212ENST00000598999 WDR62O43379 1518 aa31.49■■■□□ 2.63
HNRNPM-212ENST00000598999 WIZO95785 1651 aa31.42■■■□□ 2.62
HNRNPM-212ENST00000598999 CEP164Q9UPV0 1460 aa31.35■■■□□ 2.61
HNRNPM-212ENST00000598999 FANCD2Q9BXW9 1451 aa31.31■■■□□ 2.6
HNRNPM-212ENST00000598999 CFTRP13569 1480 aa31.24■■■□□ 2.59
HNRNPM-212ENST00000598999 OSCARQ8IYS5 282 aa31.19■■■□□ 2.58
HNRNPM-212ENST00000598999 RSF1Q96T23 1441 aaPredicted RBP31.13■■■□□ 2.57
HNRNPM-212ENST00000598999 URB2Q14146 1524 aaKnown RBP31.07■■■□□ 2.56
HNRNPM-212ENST00000598999 TOP2AP11388 1531 aaKnown RBP31.04■■■□□ 2.56
HNRNPM-212ENST00000598999 IFT140Q96RY7 1462 aa30.77■■■□□ 2.52
HNRNPM-212ENST00000598999 ZNF608Q9ULD9 1512 aaPredicted RBP30.75■■■□□ 2.51
HNRNPM-212ENST00000598999 CCDC88BA6NC98 1476 aa30.75■■■□□ 2.51
HNRNPM-212ENST00000598999 RIMBP3CA6NJZ7 1639 aa30.69■■■□□ 2.5
HNRNPM-212ENST00000598999 RIMBP3BA6NNM3 1639 aa30.69■■■□□ 2.5
HNRNPM-212ENST00000598999 RIMBP3Q9UFD9 1639 aa30.69■■■□□ 2.5
HNRNPM-212ENST00000598999 PRDM2Q13029 1718 aa30.68■■■□□ 2.5
HNRNPM-212ENST00000598999 TOPBP1Q92547 1522 aa30.66■■■□□ 2.5
HNRNPM-212ENST00000598999 ABCC8Q09428 1581 aa30.59■■■□□ 2.49
HNRNPM-212ENST00000598999 ARHGEF11O15085 1522 aa30.59■■■□□ 2.49
HNRNPM-212ENST00000598999 EIF4G3O43432 1585 aaKnown RBP30.49■■■□□ 2.47
HNRNPM-212ENST00000598999 DNMBPQ6XZF7 1577 aa30.48■■■□□ 2.47
HNRNPM-212ENST00000598999 CYB5RLQ6IPT4 315 aa30.46■■■□□ 2.47
HNRNPM-212ENST00000598999 AQRO60306 1485 aaKnown RBP eCLIP30.44■■■□□ 2.464e-9■■■■■ 31.4
HNRNPM-212ENST00000598999 TARBP1Q13395 1621 aaKnown RBP30.38■■■□□ 2.45
HNRNPM-212ENST00000598999 FBLN2P98095 1184 aa30.35■■■□□ 2.45
HNRNPM-212ENST00000598999 POLA1P09884 1462 aaPredicted RBP30.32■■■□□ 2.44
HNRNPM-212ENST00000598999 CHD1O14646 1710 aa30.27■■■□□ 2.44
HNRNPM-212ENST00000598999 ARAP1Q96P48 1450 aa30.27■■■□□ 2.44
HNRNPM-212ENST00000598999 TRHP20396 242 aaPredicted RBP30.25■■■□□ 2.43
HNRNPM-212ENST00000598999 RAD54L2Q9Y4B4 1467 aa30.23■■■□□ 2.43
HNRNPM-212ENST00000598999 SOGA1O94964 1423 aa30.22■■■□□ 2.43
HNRNPM-212ENST00000598999 TDRD9Q8NDG6 1382 aaKnown RBP30.22■■■□□ 2.43
HNRNPM-212ENST00000598999 SNAPC4Q5SXM2 1469 aa30.09■■■□□ 2.41
HNRNPM-212ENST00000598999 CHMP7Q8WUX9 453 aaPredicted RBP30.08■■■□□ 2.41
HNRNPM-212ENST00000598999 FGD5Q6ZNL6 1462 aa30.07■■■□□ 2.4
HNRNPM-212ENST00000598999 WDR97A6NE52 1622 aa30.04■■■□□ 2.4
HNRNPM-212ENST00000598999 CLASP1Q7Z460 1538 aa30.02■■■□□ 2.4
HNRNPM-212ENST00000598999 MAGI1Q96QZ7 1491 aaPredicted RBP30.01■■■□□ 2.4
HNRNPM-212ENST00000598999 GRIN2BQ13224 1484 aa29.98■■■□□ 2.39
HNRNPM-212ENST00000598999 CUX1P39880 1505 aa29.97■■■□□ 2.39
HNRNPM-212ENST00000598999 SYNJ1O43426 1573 aa29.96■■■□□ 2.39
HNRNPM-212ENST00000598999 SYNJ2O15056 1496 aa29.93■■■□□ 2.38
HNRNPM-212ENST00000598999 GAPVD1Q14C86 1478 aa29.81■■■□□ 2.36
HNRNPM-212ENST00000598999 ABCA10Q8WWZ4 1543 aa29.72■■■□□ 2.35
HNRNPM-212ENST00000598999 PBRM1Q86U86 1689 aa29.69■■■□□ 2.34
HNRNPM-212ENST00000598999 ABCA5Q8WWZ7 1642 aa29.65■■■□□ 2.34
HNRNPM-212ENST00000598999 AEBP2Q6ZN18 517 aaPredicted RBP29.65■■■□□ 2.34
HNRNPM-212ENST00000598999 GRIN2AQ12879 1464 aa29.58■■■□□ 2.33
HNRNPM-212ENST00000598999 WRNQ14191 1432 aaPredicted RBP eCLIP29.55■■■□□ 2.32
HNRNPM-212ENST00000598999 ERCC6L2Q5T890 1561 aa29.52■■■□□ 2.32
HNRNPM-212ENST00000598999 NUP160Q12769 1436 aa29.52■■■□□ 2.32
HNRNPM-212ENST00000598999 SUPT5HO00267 1087 aaKnown RBP29.47■■■□□ 2.31
HNRNPM-212ENST00000598999 ADAMTS12P58397 1594 aa29.46■■■□□ 2.31
HNRNPM-212ENST00000598999 CEP170Q5SW79 1584 aa29.45■■■□□ 2.31
HNRNPM-212ENST00000598999 FHAD1B1AJZ9 1412 aa29.45■■■□□ 2.3
HNRNPM-212ENST00000598999 TOP2BQ02880 1626 aa29.36■■■□□ 2.29
HNRNPM-212ENST00000598999 SHROOM2Q13796 1616 aa29.36■■■□□ 2.29
HNRNPM-212ENST00000598999 BIVM-ERCC5R4GMW8 1640 aa29.34■■■□□ 2.29
HNRNPM-212ENST00000598999 ERICH3Q5RHP9 1530 aa29.33■■■□□ 2.29
HNRNPM-212ENST00000598999 PRG4Q92954 1404 aaPredicted RBP29.28■■■□□ 2.28
HNRNPM-212ENST00000598999 JPH4Q96JJ6 628 aa29.27■■■□□ 2.28
HNRNPM-212ENST00000598999 NPM1P06748 294 aaKnown RBP eCLIP29.1■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms