RNA–Protein interactions for RNA: ENST00000598962.5

PLD3-219, Transcript of phospholipase D family member 3, humanhuman

TSL 4

Gene PLD3, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLD3-219ENST00000598962 NISCHQ9Y2I1 1504 aa49.55■■■■■ 5.52
PLD3-219ENST00000598962 ABCC9O60706 1549 aa44.84■■■■■ 4.77
PLD3-219ENST00000598962 CCDC180Q9P1Z9 1646 aa44.66■■■■■ 4.74
PLD3-219ENST00000598962 RB1CC1Q8TDY2 1594 aa42.61■■■■■ 4.41
PLD3-219ENST00000598962 DNAJC5BQ9UF47 199 aa42.32■■■■■ 4.37
PLD3-219ENST00000598962 NACADO15069 1562 aa42.25■■■■■ 4.35
PLD3-219ENST00000598962 DCAF8L2P0C7V8 631 aa41.83■■■■■ 4.29
PLD3-219ENST00000598962 UNC13AQ9UPW8 1703 aa41.74■■■■■ 4.27
PLD3-219ENST00000598962 PABPN1Q86U42 306 aaKnown RBP eCLIP41.66■■■■■ 4.26
PLD3-219ENST00000598962 MYO15BQ96JP2 1530 aa41.59■■■■■ 4.25
PLD3-219ENST00000598962 BICRAQ9NZM4 1560 aa41.4■■■■■ 4.22
PLD3-219ENST00000598962 ZCCHC6Q5VYS8 1495 aaKnown RBP41.01■■■■■ 4.16
PLD3-219ENST00000598962 DCAF1Q9Y4B6 1507 aa40.95■■■■■ 4.15
PLD3-219ENST00000598962 SHROOM4Q9ULL8 1493 aa40.82■■■■■ 4.12
PLD3-219ENST00000598962 SCRIBQ14160 1630 aa40.6■■■■■ 4.09
PLD3-219ENST00000598962 CC2D2AQ9P2K1 1620 aa40.55■■■■■ 4.08
PLD3-219ENST00000598962 CECR2Q9BXF3 1484 aa40.44■■■■■ 4.06
PLD3-219ENST00000598962 EIF4G1Q04637 1599 aaKnown RBP40.39■■■■■ 4.06
PLD3-219ENST00000598962 DNAJC5Q9H3Z4 198 aa39.09■■■■□ 3.85
PLD3-219ENST00000598962 NCAPD3P42695 1498 aa38.99■■■■□ 3.83
PLD3-219ENST00000598962 ATAD2BQ9ULI0 1458 aa38.82■■■■□ 3.81
PLD3-219ENST00000598962 CUX2O14529 1486 aa38.81■■■■□ 3.8
PLD3-219ENST00000598962 SMARCA4P51532 1647 aa38.74■■■■□ 3.79
PLD3-219ENST00000598962 ERCC6Q03468 1493 aa38.73■■■■□ 3.79
PLD3-219ENST00000598962 SMARCA2P51531 1590 aa38.71■■■■□ 3.79
PLD3-219ENST00000598962 HMGXB3Q12766 1538 aa38.69■■■■□ 3.78
PLD3-219ENST00000598962 BAZ1AQ9NRL2 1556 aaPredicted RBP38.48■■■■□ 3.75
PLD3-219ENST00000598962 NESP48681 1621 aa38.45■■■■□ 3.75
PLD3-219ENST00000598962 BAZ1BQ9UIG0 1483 aaKnown RBP38.41■■■■□ 3.74
PLD3-219ENST00000598962 PEG3Q9GZU2 1588 aa38.39■■■■□ 3.74
PLD3-219ENST00000598962 LAMC3Q9Y6N6 1575 aa38.19■■■■□ 3.7
PLD3-219ENST00000598962 THOC2Q8NI27 1593 aaKnown RBP38.18■■■■□ 3.7
PLD3-219ENST00000598962 MROH2BQ7Z745 1585 aa38.17■■■■□ 3.7
PLD3-219ENST00000598962 KIF21AQ7Z4S6 1674 aa38.02■■■■□ 3.68
PLD3-219ENST00000598962 PDS5BQ9NTI5 1447 aa37.93■■■■□ 3.66
PLD3-219ENST00000598962 CADPSQ9ULU8 1353 aa37.77■■■■□ 3.64
PLD3-219ENST00000598962 WIZO95785 1651 aa37.72■■■■□ 3.63
PLD3-219ENST00000598962 MRC2Q9UBG0 1479 aa37.63■■■■□ 3.61
PLD3-219ENST00000598962 WDR62O43379 1518 aa37.57■■■■□ 3.61
PLD3-219ENST00000598962 CEP164Q9UPV0 1460 aa37.42■■■■□ 3.58
PLD3-219ENST00000598962 FANCD2Q9BXW9 1451 aa37.34■■■■□ 3.57
PLD3-219ENST00000598962 CFTRP13569 1480 aa37.29■■■■□ 3.56
PLD3-219ENST00000598962 RSF1Q96T23 1441 aaPredicted RBP37.26■■■■□ 3.55
PLD3-219ENST00000598962 TOP2AP11388 1531 aaKnown RBP37.21■■■■□ 3.55
PLD3-219ENST00000598962 TRIM41Q8WV44 630 aa37.2■■■■□ 3.55
PLD3-219ENST00000598962 URB2Q14146 1524 aaKnown RBP37.07■■■■□ 3.53
PLD3-219ENST00000598962 PRDM2Q13029 1718 aa37.01■■■■□ 3.51
PLD3-219ENST00000598962 OSCARQ8IYS5 282 aa36.94■■■■□ 3.5
PLD3-219ENST00000598962 CCDC88BA6NC98 1476 aa36.77■■■■□ 3.48
PLD3-219ENST00000598962 IFT140Q96RY7 1462 aa36.69■■■■□ 3.46
PLD3-219ENST00000598962 ZNF608Q9ULD9 1512 aaPredicted RBP36.64■■■■□ 3.46
PLD3-219ENST00000598962 TOPBP1Q92547 1522 aa36.62■■■■□ 3.45
PLD3-219ENST00000598962 RIMBP3CA6NJZ7 1639 aa36.57■■■■□ 3.44
PLD3-219ENST00000598962 RIMBP3BA6NNM3 1639 aa36.57■■■■□ 3.44
PLD3-219ENST00000598962 RIMBP3Q9UFD9 1639 aa36.57■■■■□ 3.44
PLD3-219ENST00000598962 ABCC8Q09428 1581 aa36.54■■■■□ 3.44
PLD3-219ENST00000598962 DNMBPQ6XZF7 1577 aa36.48■■■■□ 3.43
PLD3-219ENST00000598962 EIF4G3O43432 1585 aaKnown RBP36.47■■■■□ 3.43
PLD3-219ENST00000598962 ARHGEF11O15085 1522 aa36.39■■■■□ 3.42
PLD3-219ENST00000598962 TARBP1Q13395 1621 aaKnown RBP36.35■■■■□ 3.41
PLD3-219ENST00000598962 CHD1O14646 1710 aa36.28■■■■□ 3.4
PLD3-219ENST00000598962 AQRO60306 1485 aaKnown RBP eCLIP36.26■■■■□ 3.4
PLD3-219ENST00000598962 POLA1P09884 1462 aaPredicted RBP36.22■■■■□ 3.39
PLD3-219ENST00000598962 CYB5RLQ6IPT4 315 aa36.08■■■■□ 3.37
PLD3-219ENST00000598962 RAD54L2Q9Y4B4 1467 aa36.07■■■■□ 3.37
PLD3-219ENST00000598962 FBLN2P98095 1184 aa36.03■■■■□ 3.36
PLD3-219ENST00000598962 SOGA1O94964 1423 aa36.02■■■■□ 3.36
PLD3-219ENST00000598962 ARAP1Q96P48 1450 aa36■■■■□ 3.35
PLD3-219ENST00000598962 WDR97A6NE52 1622 aa35.99■■■■□ 3.35
PLD3-219ENST00000598962 TDRD9Q8NDG6 1382 aaKnown RBP35.97■■■■□ 3.35
PLD3-219ENST00000598962 FGD5Q6ZNL6 1462 aa35.94■■■■□ 3.34
PLD3-219ENST00000598962 SNAPC4Q5SXM2 1469 aa35.9■■■■□ 3.34
PLD3-219ENST00000598962 CUX1P39880 1505 aa35.88■■■■□ 3.33
PLD3-219ENST00000598962 CLASP1Q7Z460 1538 aa35.83■■■■□ 3.33
PLD3-219ENST00000598962 MAGI1Q96QZ7 1491 aaPredicted RBP35.81■■■■□ 3.32
PLD3-219ENST00000598962 SYNJ1O43426 1573 aa35.78■■■■□ 3.32
PLD3-219ENST00000598962 GRIN2BQ13224 1484 aa35.77■■■■□ 3.32
PLD3-219ENST00000598962 TRHP20396 242 aaPredicted RBP35.75■■■■□ 3.31
PLD3-219ENST00000598962 CHMP7Q8WUX9 453 aaPredicted RBP35.75■■■■□ 3.31
PLD3-219ENST00000598962 SYNJ2O15056 1496 aa35.68■■■■□ 3.3
PLD3-219ENST00000598962 PBRM1Q86U86 1689 aa35.68■■■■□ 3.3
PLD3-219ENST00000598962 GAPVD1Q14C86 1478 aa35.6■■■■□ 3.29
PLD3-219ENST00000598962 ABCA5Q8WWZ7 1642 aa35.54■■■■□ 3.28
PLD3-219ENST00000598962 ABCA10Q8WWZ4 1543 aa35.54■■■■□ 3.28
PLD3-219ENST00000598962 GRIN2AQ12879 1464 aa35.31■■■■□ 3.24
PLD3-219ENST00000598962 SUPT5HO00267 1087 aaKnown RBP35.31■■■■□ 3.24
PLD3-219ENST00000598962 WRNQ14191 1432 aaPredicted RBP eCLIP35.29■■■■□ 3.24
PLD3-219ENST00000598962 BIVM-ERCC5R4GMW8 1640 aa35.28■■■■□ 3.24
PLD3-219ENST00000598962 ADAMTS12P58397 1594 aa35.28■■■■□ 3.24
PLD3-219ENST00000598962 TOP2BQ02880 1626 aa35.25■■■■□ 3.23
PLD3-219ENST00000598962 ERCC6L2Q5T890 1561 aa35.23■■■■□ 3.23
PLD3-219ENST00000598962 NUP160Q12769 1436 aa35.22■■■■□ 3.23
PLD3-219ENST00000598962 CEP170Q5SW79 1584 aa35.21■■■■□ 3.23
PLD3-219ENST00000598962 FHAD1B1AJZ9 1412 aa35.14■■■■□ 3.22
PLD3-219ENST00000598962 SHROOM2Q13796 1616 aa35.14■■■■□ 3.22
PLD3-219ENST00000598962 ERICH3Q5RHP9 1530 aa35.1■■■■□ 3.21
PLD3-219ENST00000598962 AEBP2Q6ZN18 517 aaPredicted RBP34.93■■■■□ 3.18
PLD3-219ENST00000598962 KIF13AQ9H1H9 1805 aa34.86■■■■□ 3.17
PLD3-219ENST00000598962 PRG4Q92954 1404 aaPredicted RBP34.86■■■■□ 3.17
PLD3-219ENST00000598962 JPH4Q96JJ6 628 aa34.82■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms