RNA–Protein interactions for RNA: ENST00000598871.5

CALM3-211, Transcript of calmodulin 3, humanhuman

TSL 4 BASIC

Gene CALM3, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3-211ENST00000598871 NISCHQ9Y2I1 1504 aa43.88■■■■■ 4.61
CALM3-211ENST00000598871 ABCC9O60706 1549 aa39.27■■■■□ 3.88
CALM3-211ENST00000598871 CCDC180Q9P1Z9 1646 aa39.22■■■■□ 3.87
CALM3-211ENST00000598871 RB1CC1Q8TDY2 1594 aa37.37■■■■□ 3.57
CALM3-211ENST00000598871 NACADO15069 1562 aa37.16■■■■□ 3.54
CALM3-211ENST00000598871 DCAF8L2P0C7V8 631 aa37.08■■■■□ 3.53
CALM3-211ENST00000598871 DNAJC5BQ9UF47 199 aa36.88■■■■□ 3.49
CALM3-211ENST00000598871 MYO15BQ96JP2 1530 aa36.71■■■■□ 3.47
CALM3-211ENST00000598871 PABPN1Q86U42 306 aaKnown RBP eCLIP36.65■■■■□ 3.46
CALM3-211ENST00000598871 UNC13AQ9UPW8 1703 aa36.37■■■■□ 3.41
CALM3-211ENST00000598871 ZCCHC6Q5VYS8 1495 aaKnown RBP36.37■■■■□ 3.41
CALM3-211ENST00000598871 BICRAQ9NZM4 1560 aa36.28■■■■□ 3.4
CALM3-211ENST00000598871 DCAF1Q9Y4B6 1507 aa36.25■■■■□ 3.39
CALM3-211ENST00000598871 SHROOM4Q9ULL8 1493 aa35.84■■■■□ 3.33
CALM3-211ENST00000598871 SCRIBQ14160 1630 aa35.77■■■■□ 3.32
CALM3-211ENST00000598871 CC2D2AQ9P2K1 1620 aa35.43■■■■□ 3.26
CALM3-211ENST00000598871 EIF4G1Q04637 1599 aaKnown RBP35.39■■■■□ 3.26
CALM3-211ENST00000598871 CECR2Q9BXF3 1484 aa35.39■■■■□ 3.26
CALM3-211ENST00000598871 NCAPD3P42695 1498 aa34.38■■■■□ 3.09
CALM3-211ENST00000598871 ATAD2BQ9ULI0 1458 aa34.26■■■■□ 3.07
CALM3-211ENST00000598871 SMARCA4P51532 1647 aa34.15■■■■□ 3.06
CALM3-211ENST00000598871 SMARCA2P51531 1590 aa34.11■■■■□ 3.05
CALM3-211ENST00000598871 HMGXB3Q12766 1538 aa34.04■■■■□ 3.04
CALM3-211ENST00000598871 BAZ1AQ9NRL2 1556 aaPredicted RBP34.03■■■■□ 3.04
CALM3-211ENST00000598871 ERCC6Q03468 1493 aa33.9■■■■□ 3.02
CALM3-211ENST00000598871 BAZ1BQ9UIG0 1483 aaKnown RBP33.89■■■■□ 3.02
CALM3-211ENST00000598871 PEG3Q9GZU2 1588 aa33.85■■■■□ 3.01
CALM3-211ENST00000598871 CUX2O14529 1486 aa33.82■■■■□ 3.01
CALM3-211ENST00000598871 DNAJC5Q9H3Z4 198 aa33.82■■■■□ 3
CALM3-211ENST00000598871 MROH2BQ7Z745 1585 aa33.81■■■■□ 3
CALM3-211ENST00000598871 NESP48681 1621 aa33.75■■■□□ 2.99
CALM3-211ENST00000598871 LAMC3Q9Y6N6 1575 aa33.5■■■□□ 2.95
CALM3-211ENST00000598871 PDS5BQ9NTI5 1447 aa33.38■■■□□ 2.93
CALM3-211ENST00000598871 CADPSQ9ULU8 1353 aa33.34■■■□□ 2.93
CALM3-211ENST00000598871 WIZO95785 1651 aa33.33■■■□□ 2.93
CALM3-211ENST00000598871 THOC2Q8NI27 1593 aaKnown RBP33.32■■■□□ 2.92
CALM3-211ENST00000598871 KIF21AQ7Z4S6 1674 aa33.19■■■□□ 2.9
CALM3-211ENST00000598871 RSF1Q96T23 1441 aaPredicted RBP33.18■■■□□ 2.9
CALM3-211ENST00000598871 MRC2Q9UBG0 1479 aa33.04■■■□□ 2.88
CALM3-211ENST00000598871 TOP2AP11388 1531 aaKnown RBP32.96■■■□□ 2.87
CALM3-211ENST00000598871 CFTRP13569 1480 aa32.95■■■□□ 2.87
CALM3-211ENST00000598871 WDR62O43379 1518 aa32.94■■■□□ 2.86
CALM3-211ENST00000598871 FANCD2Q9BXW9 1451 aa32.92■■■□□ 2.86
CALM3-211ENST00000598871 CEP164Q9UPV0 1460 aa32.92■■■□□ 2.86
CALM3-211ENST00000598871 CCDC88BA6NC98 1476 aa32.64■■■□□ 2.82
CALM3-211ENST00000598871 URB2Q14146 1524 aaKnown RBP32.62■■■□□ 2.81
CALM3-211ENST00000598871 PRDM2Q13029 1718 aa32.39■■■□□ 2.78
CALM3-211ENST00000598871 OSCARQ8IYS5 282 aa32.37■■■□□ 2.77
CALM3-211ENST00000598871 TRIM41Q8WV44 630 aa32.32■■■□□ 2.76
CALM3-211ENST00000598871 TOPBP1Q92547 1522 aa32.29■■■□□ 2.76
CALM3-211ENST00000598871 IFT140Q96RY7 1462 aa32.29■■■□□ 2.76
CALM3-211ENST00000598871 ABCC8Q09428 1581 aa32.24■■■□□ 2.75
CALM3-211ENST00000598871 ZNF608Q9ULD9 1512 aaPredicted RBP32.22■■■□□ 2.75
CALM3-211ENST00000598871 DNMBPQ6XZF7 1577 aa32.13■■■□□ 2.73
CALM3-211ENST00000598871 AQRO60306 1485 aaKnown RBP eCLIP31.97■■■□□ 2.711e-10■■□□□ 12.6
CALM3-211ENST00000598871 POLA1P09884 1462 aaPredicted RBP31.97■■■□□ 2.71
CALM3-211ENST00000598871 EIF4G3O43432 1585 aaKnown RBP31.96■■■□□ 2.71
CALM3-211ENST00000598871 TARBP1Q13395 1621 aaKnown RBP31.95■■■□□ 2.71
CALM3-211ENST00000598871 SOGA1O94964 1423 aa31.87■■■□□ 2.69
CALM3-211ENST00000598871 RAD54L2Q9Y4B4 1467 aa31.86■■■□□ 2.69
CALM3-211ENST00000598871 TDRD9Q8NDG6 1382 aaKnown RBP31.81■■■□□ 2.68
CALM3-211ENST00000598871 RIMBP3CA6NJZ7 1639 aa31.79■■■□□ 2.68
CALM3-211ENST00000598871 RIMBP3BA6NNM3 1639 aa31.79■■■□□ 2.68
CALM3-211ENST00000598871 RIMBP3Q9UFD9 1639 aa31.79■■■□□ 2.68
CALM3-211ENST00000598871 SUPT5HO00267 1087 aaKnown RBP31.79■■■□□ 2.68
CALM3-211ENST00000598871 FBLN2P98095 1184 aa31.77■■■□□ 2.68
CALM3-211ENST00000598871 FGD5Q6ZNL6 1462 aa31.77■■■□□ 2.68
CALM3-211ENST00000598871 ARHGEF11O15085 1522 aa31.75■■■□□ 2.67
CALM3-211ENST00000598871 CUX1P39880 1505 aa31.74■■■□□ 2.67
CALM3-211ENST00000598871 CHD1O14646 1710 aa31.64■■■□□ 2.66
CALM3-211ENST00000598871 WDR97A6NE52 1622 aa31.62■■■□□ 2.65
CALM3-211ENST00000598871 CYB5RLQ6IPT4 315 aa31.61■■■□□ 2.65
CALM3-211ENST00000598871 SNAPC4Q5SXM2 1469 aa31.6■■■□□ 2.65
CALM3-211ENST00000598871 CHMP7Q8WUX9 453 aaPredicted RBP31.56■■■□□ 2.64
CALM3-211ENST00000598871 GRIN2BQ13224 1484 aa31.55■■■□□ 2.64
CALM3-211ENST00000598871 MAGI1Q96QZ7 1491 aaPredicted RBP31.53■■■□□ 2.64
CALM3-211ENST00000598871 ARAP1Q96P48 1450 aa31.46■■■□□ 2.63
CALM3-211ENST00000598871 GAPVD1Q14C86 1478 aa31.45■■■□□ 2.62
CALM3-211ENST00000598871 SYNJ2O15056 1496 aa31.44■■■□□ 2.62
CALM3-211ENST00000598871 ABCA10Q8WWZ4 1543 aa31.44■■■□□ 2.62
CALM3-211ENST00000598871 CLASP1Q7Z460 1538 aa31.39■■■□□ 2.62
CALM3-211ENST00000598871 SYNJ1O43426 1573 aa31.37■■■□□ 2.61
CALM3-211ENST00000598871 WRNQ14191 1432 aaPredicted RBP eCLIP31.35■■■□□ 2.61
CALM3-211ENST00000598871 ABCA5Q8WWZ7 1642 aa31.31■■■□□ 2.6
CALM3-211ENST00000598871 PBRM1Q86U86 1689 aa31.27■■■□□ 2.6
CALM3-211ENST00000598871 TOP2BQ02880 1626 aa31.23■■■□□ 2.59
CALM3-211ENST00000598871 TRHP20396 242 aaPredicted RBP31.2■■■□□ 2.59
CALM3-211ENST00000598871 BIVM-ERCC5R4GMW8 1640 aa31.18■■■□□ 2.58
CALM3-211ENST00000598871 GRIN2AQ12879 1464 aa31.14■■■□□ 2.57
CALM3-211ENST00000598871 FHAD1B1AJZ9 1412 aa31.07■■■□□ 2.57
CALM3-211ENST00000598871 ADAMTS12P58397 1594 aa31.07■■■□□ 2.56
CALM3-211ENST00000598871 NUP160Q12769 1436 aa31.05■■■□□ 2.56
CALM3-211ENST00000598871 ERICH3Q5RHP9 1530 aa31.02■■■□□ 2.56
CALM3-211ENST00000598871 CEP170Q5SW79 1584 aa30.97■■■□□ 2.55
CALM3-211ENST00000598871 ERCC6L2Q5T890 1561 aa30.91■■■□□ 2.54
CALM3-211ENST00000598871 SHROOM2Q13796 1616 aa30.82■■■□□ 2.52
CALM3-211ENST00000598871 JPH4Q96JJ6 628 aa30.8■■■□□ 2.52
CALM3-211ENST00000598871 PRG4Q92954 1404 aaPredicted RBP30.75■■■□□ 2.51
CALM3-211ENST00000598871 IGF1RP08069 1367 aa30.73■■■□□ 2.51
CALM3-211ENST00000598871 KIF27Q86VH2 1401 aa30.7■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms