RNA–Protein interactions for RNA: ENST00000598444.1

ARHGEF1-215, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 425 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-215ENST00000598444 NISCHQ9Y2I1 1504 aa21.96■■□□□ 1.11
ARHGEF1-215ENST00000598444 CCDC180Q9P1Z9 1646 aa19.67■□□□□ 0.74
ARHGEF1-215ENST00000598444 ABCC9O60706 1549 aa19.56■□□□□ 0.72
ARHGEF1-215ENST00000598444 RB1CC1Q8TDY2 1594 aa18.67■□□□□ 0.58
ARHGEF1-215ENST00000598444 DCAF8L2P0C7V8 631 aa18.57■□□□□ 0.56
ARHGEF1-215ENST00000598444 NACADO15069 1562 aa18.55■□□□□ 0.56
ARHGEF1-215ENST00000598444 UNC13AQ9UPW8 1703 aa18.33■□□□□ 0.52
ARHGEF1-215ENST00000598444 MYO15BQ96JP2 1530 aa18.3■□□□□ 0.52
ARHGEF1-215ENST00000598444 DNAJC5BQ9UF47 199 aa18.25■□□□□ 0.51
ARHGEF1-215ENST00000598444 PABPN1Q86U42 306 aaKnown RBP eCLIP18.24■□□□□ 0.519e-8■■□□□ 11.5
ARHGEF1-215ENST00000598444 ZCCHC6Q5VYS8 1495 aaKnown RBP18.2■□□□□ 0.5
ARHGEF1-215ENST00000598444 DCAF1Q9Y4B6 1507 aa18.12■□□□□ 0.49
ARHGEF1-215ENST00000598444 BICRAQ9NZM4 1560 aa18.11■□□□□ 0.49
ARHGEF1-215ENST00000598444 SCRIBQ14160 1630 aa17.94■□□□□ 0.46
ARHGEF1-215ENST00000598444 SHROOM4Q9ULL8 1493 aa17.82■□□□□ 0.44
ARHGEF1-215ENST00000598444 CC2D2AQ9P2K1 1620 aa17.68■□□□□ 0.42
ARHGEF1-215ENST00000598444 EIF4G1Q04637 1599 aaKnown RBP17.65■□□□□ 0.42
ARHGEF1-215ENST00000598444 CECR2Q9BXF3 1484 aa17.59■□□□□ 0.41
ARHGEF1-215ENST00000598444 SMARCA4P51532 1647 aa17.12■□□□□ 0.33
ARHGEF1-215ENST00000598444 NCAPD3P42695 1498 aa17.12■□□□□ 0.33
ARHGEF1-215ENST00000598444 ATAD2BQ9ULI0 1458 aa17.08■□□□□ 0.32
ARHGEF1-215ENST00000598444 SMARCA2P51531 1590 aa17.06■□□□□ 0.32
ARHGEF1-215ENST00000598444 BAZ1AQ9NRL2 1556 aaPredicted RBP17.03■□□□□ 0.32
ARHGEF1-215ENST00000598444 HMGXB3Q12766 1538 aa16.99■□□□□ 0.31
ARHGEF1-215ENST00000598444 BAZ1BQ9UIG0 1483 aaKnown RBP16.93■□□□□ 0.3
ARHGEF1-215ENST00000598444 MROH2BQ7Z745 1585 aa16.93■□□□□ 0.3
ARHGEF1-215ENST00000598444 PEG3Q9GZU2 1588 aa16.92■□□□□ 0.3
ARHGEF1-215ENST00000598444 ERCC6Q03468 1493 aa16.87■□□□□ 0.29
ARHGEF1-215ENST00000598444 NESP48681 1621 aa16.83■□□□□ 0.28
ARHGEF1-215ENST00000598444 CUX2O14529 1486 aa16.78■□□□□ 0.28
ARHGEF1-215ENST00000598444 WIZO95785 1651 aa16.77■□□□□ 0.28
ARHGEF1-215ENST00000598444 LAMC3Q9Y6N6 1575 aa16.73■□□□□ 0.27
ARHGEF1-215ENST00000598444 DNAJC5Q9H3Z4 198 aa16.68■□□□□ 0.26
ARHGEF1-215ENST00000598444 KIF21AQ7Z4S6 1674 aa16.67■□□□□ 0.26
ARHGEF1-215ENST00000598444 PDS5BQ9NTI5 1447 aa16.62■□□□□ 0.25
ARHGEF1-215ENST00000598444 THOC2Q8NI27 1593 aaKnown RBP16.62■□□□□ 0.25
ARHGEF1-215ENST00000598444 CADPSQ9ULU8 1353 aa16.61■□□□□ 0.25
ARHGEF1-215ENST00000598444 RSF1Q96T23 1441 aaPredicted RBP16.61■□□□□ 0.25
ARHGEF1-215ENST00000598444 TOP2AP11388 1531 aaKnown RBP16.51■□□□□ 0.23
ARHGEF1-215ENST00000598444 MRC2Q9UBG0 1479 aa16.46■□□□□ 0.23
ARHGEF1-215ENST00000598444 CFTRP13569 1480 aa16.43■□□□□ 0.22
ARHGEF1-215ENST00000598444 FANCD2Q9BXW9 1451 aa16.42■□□□□ 0.22
ARHGEF1-215ENST00000598444 CEP164Q9UPV0 1460 aa16.42■□□□□ 0.22
ARHGEF1-215ENST00000598444 WDR62O43379 1518 aa16.4■□□□□ 0.22
ARHGEF1-215ENST00000598444 PRDM2Q13029 1718 aa16.37■□□□□ 0.21
ARHGEF1-215ENST00000598444 CCDC88BA6NC98 1476 aa16.35■□□□□ 0.21
ARHGEF1-215ENST00000598444 URB2Q14146 1524 aaKnown RBP16.28■□□□□ 0.2
ARHGEF1-215ENST00000598444 TOPBP1Q92547 1522 aa16.13■□□□□ 0.17
ARHGEF1-215ENST00000598444 ABCC8Q09428 1581 aa16.11■□□□□ 0.17
ARHGEF1-215ENST00000598444 IFT140Q96RY7 1462 aa16.09■□□□□ 0.17
ARHGEF1-215ENST00000598444 OSCARQ8IYS5 282 aa16.08■□□□□ 0.16
ARHGEF1-215ENST00000598444 DNMBPQ6XZF7 1577 aa16.08■□□□□ 0.16
ARHGEF1-215ENST00000598444 ZNF608Q9ULD9 1512 aaPredicted RBP16.06■□□□□ 0.16
ARHGEF1-215ENST00000598444 SUPT5HO00267 1087 aaKnown RBP16.03■□□□□ 0.16
ARHGEF1-215ENST00000598444 TRIM41Q8WV44 630 aa16.02■□□□□ 0.16
ARHGEF1-215ENST00000598444 TARBP1Q13395 1621 aaKnown RBP15.99■□□□□ 0.15
ARHGEF1-215ENST00000598444 EIF4G3O43432 1585 aaKnown RBP15.98■□□□□ 0.15
ARHGEF1-215ENST00000598444 POLA1P09884 1462 aaPredicted RBP15.96■□□□□ 0.14
ARHGEF1-215ENST00000598444 AQRO60306 1485 aaKnown RBP eCLIP15.95■□□□□ 0.142e-11■■■■■ 48.4
ARHGEF1-215ENST00000598444 SOGA1O94964 1423 aa15.93■□□□□ 0.14
ARHGEF1-215ENST00000598444 RAD54L2Q9Y4B4 1467 aa15.92■□□□□ 0.14
ARHGEF1-215ENST00000598444 CHD1O14646 1710 aa15.9■□□□□ 0.14
ARHGEF1-215ENST00000598444 CUX1P39880 1505 aa15.89■□□□□ 0.13
ARHGEF1-215ENST00000598444 FGD5Q6ZNL6 1462 aa15.89■□□□□ 0.13
ARHGEF1-215ENST00000598444 TDRD9Q8NDG6 1382 aaKnown RBP15.87■□□□□ 0.13
ARHGEF1-215ENST00000598444 FBLN2P98095 1184 aa15.86■□□□□ 0.13
ARHGEF1-215ENST00000598444 RIMBP3CA6NJZ7 1639 aa15.86■□□□□ 0.13
ARHGEF1-215ENST00000598444 RIMBP3BA6NNM3 1639 aa15.86■□□□□ 0.13
ARHGEF1-215ENST00000598444 RIMBP3Q9UFD9 1639 aa15.86■□□□□ 0.13
ARHGEF1-215ENST00000598444 WDR97A6NE52 1622 aa15.81■□□□□ 0.12
ARHGEF1-215ENST00000598444 ARHGEF11O15085 1522 aa15.78■□□□□ 0.12
ARHGEF1-215ENST00000598444 SNAPC4Q5SXM2 1469 aa15.76■□□□□ 0.11
ARHGEF1-215ENST00000598444 PBRM1Q86U86 1689 aa15.75■□□□□ 0.11
ARHGEF1-215ENST00000598444 GRIN2BQ13224 1484 aa15.74■□□□□ 0.11
ARHGEF1-215ENST00000598444 CHMP7Q8WUX9 453 aaPredicted RBP15.74■□□□□ 0.11
ARHGEF1-215ENST00000598444 MAGI1Q96QZ7 1491 aaPredicted RBP15.72■□□□□ 0.11
ARHGEF1-215ENST00000598444 GAPVD1Q14C86 1478 aa15.71■□□□□ 0.11
ARHGEF1-215ENST00000598444 CYB5RLQ6IPT4 315 aa15.71■□□□□ 0.11
ARHGEF1-215ENST00000598444 ABCA10Q8WWZ4 1543 aa15.7■□□□□ 0.1
ARHGEF1-215ENST00000598444 BIVM-ERCC5R4GMW8 1640 aa15.69■□□□□ 0.1
ARHGEF1-215ENST00000598444 TOP2BQ02880 1626 aa15.68■□□□□ 0.1
ARHGEF1-215ENST00000598444 ABCA5Q8WWZ7 1642 aa15.68■□□□□ 0.1
ARHGEF1-215ENST00000598444 WRNQ14191 1432 aaPredicted RBP eCLIP15.68■□□□□ 0.1
ARHGEF1-215ENST00000598444 SYNJ1O43426 1573 aa15.67■□□□□ 0.1
ARHGEF1-215ENST00000598444 SYNJ2O15056 1496 aa15.67■□□□□ 0.1
ARHGEF1-215ENST00000598444 CLASP1Q7Z460 1538 aa15.65■□□□□ 0.1
ARHGEF1-215ENST00000598444 ARAP1Q96P48 1450 aa15.63■□□□□ 0.09
ARHGEF1-215ENST00000598444 GRIN2AQ12879 1464 aa15.54■□□□□ 0.08
ARHGEF1-215ENST00000598444 ADAMTS12P58397 1594 aa15.53■□□□□ 0.08
ARHGEF1-215ENST00000598444 TRHP20396 242 aaPredicted RBP15.52■□□□□ 0.08
ARHGEF1-215ENST00000598444 ERICH3Q5RHP9 1530 aa15.52■□□□□ 0.07
ARHGEF1-215ENST00000598444 FHAD1B1AJZ9 1412 aa15.51■□□□□ 0.07
ARHGEF1-215ENST00000598444 CEP170Q5SW79 1584 aa15.49■□□□□ 0.07
ARHGEF1-215ENST00000598444 NUP160Q12769 1436 aa15.46■□□□□ 0.07
ARHGEF1-215ENST00000598444 ERCC6L2Q5T890 1561 aa15.44■□□□□ 0.06
ARHGEF1-215ENST00000598444 SHROOM2Q13796 1616 aa15.41■□□□□ 0.06
ARHGEF1-215ENST00000598444 KIF27Q86VH2 1401 aa15.37■□□□□ 0.05
ARHGEF1-215ENST00000598444 JPH4Q96JJ6 628 aa15.37■□□□□ 0.05
ARHGEF1-215ENST00000598444 IGF1RP08069 1367 aa15.36■□□□□ 0.05
ARHGEF1-215ENST00000598444 PRG4Q92954 1404 aaPredicted RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms