RNA–Protein interactions for RNA: ENST00000597493.5

C19orf48-208, Transcript of chromosome 19 open reading frame 48, humanhuman

TSL 2

Gene C19orf48, Length 971 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf48-208ENST00000597493 NISCHQ9Y2I1 1504 aa30.27■■■□□ 2.44
C19orf48-208ENST00000597493 CCDC180Q9P1Z9 1646 aa26.84■■□□□ 1.89
C19orf48-208ENST00000597493 ABCC9O60706 1549 aa26.41■■□□□ 1.82
C19orf48-208ENST00000597493 NACADO15069 1562 aa25.39■■□□□ 1.65
C19orf48-208ENST00000597493 RB1CC1Q8TDY2 1594 aa25.38■■□□□ 1.65
C19orf48-208ENST00000597493 DCAF8L2P0C7V8 631 aa25.32■■□□□ 1.64
C19orf48-208ENST00000597493 MYO15BQ96JP2 1530 aa25.31■■□□□ 1.64
C19orf48-208ENST00000597493 ZCCHC6Q5VYS8 1495 aaKnown RBP25.16■■□□□ 1.62
C19orf48-208ENST00000597493 DCAF1Q9Y4B6 1507 aa25.12■■□□□ 1.61
C19orf48-208ENST00000597493 PABPN1Q86U42 306 aaKnown RBP eCLIP24.75■■□□□ 1.55
C19orf48-208ENST00000597493 BICRAQ9NZM4 1560 aa24.63■■□□□ 1.53
C19orf48-208ENST00000597493 UNC13AQ9UPW8 1703 aa24.62■■□□□ 1.53
C19orf48-208ENST00000597493 DNAJC5BQ9UF47 199 aa24.52■■□□□ 1.52
C19orf48-208ENST00000597493 SHROOM4Q9ULL8 1493 aa24.46■■□□□ 1.51
C19orf48-208ENST00000597493 SCRIBQ14160 1630 aa24.41■■□□□ 1.5
C19orf48-208ENST00000597493 EIF4G1Q04637 1599 aaKnown RBP23.97■■□□□ 1.43
C19orf48-208ENST00000597493 CC2D2AQ9P2K1 1620 aa23.88■■□□□ 1.41
C19orf48-208ENST00000597493 CECR2Q9BXF3 1484 aa23.81■■□□□ 1.4
C19orf48-208ENST00000597493 NCAPD3P42695 1498 aa23.52■■□□□ 1.36
C19orf48-208ENST00000597493 ATAD2BQ9ULI0 1458 aa23.44■■□□□ 1.34
C19orf48-208ENST00000597493 BAZ1AQ9NRL2 1556 aaPredicted RBP23.44■■□□□ 1.34
C19orf48-208ENST00000597493 SMARCA4P51532 1647 aa23.41■■□□□ 1.34
C19orf48-208ENST00000597493 SMARCA2P51531 1590 aa23.36■■□□□ 1.33
C19orf48-208ENST00000597493 PEG3Q9GZU2 1588 aa23.3■■□□□ 1.32
C19orf48-208ENST00000597493 MROH2BQ7Z745 1585 aa23.29■■□□□ 1.32
C19orf48-208ENST00000597493 HMGXB3Q12766 1538 aa23.27■■□□□ 1.32
C19orf48-208ENST00000597493 BAZ1BQ9UIG0 1483 aaKnown RBP23.17■■□□□ 1.3
C19orf48-208ENST00000597493 RSF1Q96T23 1441 aaPredicted RBP23.07■■□□□ 1.28
C19orf48-208ENST00000597493 WIZO95785 1651 aa22.93■■□□□ 1.26
C19orf48-208ENST00000597493 NESP48681 1621 aa22.82■■□□□ 1.24
C19orf48-208ENST00000597493 CADPSQ9ULU8 1353 aa22.82■■□□□ 1.24
C19orf48-208ENST00000597493 LAMC3Q9Y6N6 1575 aa22.78■■□□□ 1.24
C19orf48-208ENST00000597493 ERCC6Q03468 1493 aa22.77■■□□□ 1.24
C19orf48-208ENST00000597493 TOP2AP11388 1531 aaKnown RBP22.75■■□□□ 1.23
C19orf48-208ENST00000597493 PDS5BQ9NTI5 1447 aa22.73■■□□□ 1.23
C19orf48-208ENST00000597493 CUX2O14529 1486 aa22.66■■□□□ 1.22
C19orf48-208ENST00000597493 CFTRP13569 1480 aa22.63■■□□□ 1.21
C19orf48-208ENST00000597493 CCDC88BA6NC98 1476 aa22.55■■□□□ 1.2
C19orf48-208ENST00000597493 FANCD2Q9BXW9 1451 aa22.45■■□□□ 1.18
C19orf48-208ENST00000597493 THOC2Q8NI27 1593 aaKnown RBP22.45■■□□□ 1.18
C19orf48-208ENST00000597493 MRC2Q9UBG0 1479 aa22.41■■□□□ 1.18
C19orf48-208ENST00000597493 KIF21AQ7Z4S6 1674 aa22.41■■□□□ 1.18
C19orf48-208ENST00000597493 CEP164Q9UPV0 1460 aa22.41■■□□□ 1.18
C19orf48-208ENST00000597493 WDR62O43379 1518 aa22.33■■□□□ 1.17
C19orf48-208ENST00000597493 SUPT5HO00267 1087 aaKnown RBP22.31■■□□□ 1.16
C19orf48-208ENST00000597493 DNAJC5Q9H3Z4 198 aa22.25■■□□□ 1.15
C19orf48-208ENST00000597493 URB2Q14146 1524 aaKnown RBP22.22■■□□□ 1.15
C19orf48-208ENST00000597493 ABCC8Q09428 1581 aa22.16■■□□□ 1.14
C19orf48-208ENST00000597493 PRDM2Q13029 1718 aa22.15■■□□□ 1.14
C19orf48-208ENST00000597493 TOPBP1Q92547 1522 aa22.07■■□□□ 1.12
C19orf48-208ENST00000597493 IFT140Q96RY7 1462 aa22.01■■□□□ 1.11
C19orf48-208ENST00000597493 DNMBPQ6XZF7 1577 aa21.99■■□□□ 1.11
C19orf48-208ENST00000597493 POLA1P09884 1462 aaPredicted RBP21.88■■□□□ 1.09
C19orf48-208ENST00000597493 ZNF608Q9ULD9 1512 aaPredicted RBP21.86■■□□□ 1.09
C19orf48-208ENST00000597493 SOGA1O94964 1423 aa21.85■■□□□ 1.09
C19orf48-208ENST00000597493 CUX1P39880 1505 aa21.84■■□□□ 1.09
C19orf48-208ENST00000597493 OSCARQ8IYS5 282 aa21.81■■□□□ 1.08
C19orf48-208ENST00000597493 TARBP1Q13395 1621 aaKnown RBP21.8■■□□□ 1.08
C19orf48-208ENST00000597493 FGD5Q6ZNL6 1462 aa21.77■■□□□ 1.08
C19orf48-208ENST00000597493 RAD54L2Q9Y4B4 1467 aa21.77■■□□□ 1.08
C19orf48-208ENST00000597493 AQRO60306 1485 aaKnown RBP eCLIP21.76■■□□□ 1.07not detected■■■■□ 23.4
C19orf48-208ENST00000597493 TDRD9Q8NDG6 1382 aaKnown RBP21.72■■□□□ 1.07
C19orf48-208ENST00000597493 WRNQ14191 1432 aaPredicted RBP eCLIP21.71■■□□□ 1.07
C19orf48-208ENST00000597493 WDR97A6NE52 1622 aa21.67■■□□□ 1.06
C19orf48-208ENST00000597493 EIF4G3O43432 1585 aaKnown RBP21.65■■□□□ 1.06
C19orf48-208ENST00000597493 ABCA10Q8WWZ4 1543 aa21.63■■□□□ 1.05
C19orf48-208ENST00000597493 TOP2BQ02880 1626 aa21.61■■□□□ 1.05
C19orf48-208ENST00000597493 GRIN2BQ13224 1484 aa21.58■■□□□ 1.04
C19orf48-208ENST00000597493 BIVM-ERCC5R4GMW8 1640 aa21.55■■□□□ 1.04
C19orf48-208ENST00000597493 GAPVD1Q14C86 1478 aa21.55■■□□□ 1.04
C19orf48-208ENST00000597493 SYNJ1O43426 1573 aa21.54■■□□□ 1.04
C19orf48-208ENST00000597493 MAGI1Q96QZ7 1491 aaPredicted RBP21.53■■□□□ 1.04
C19orf48-208ENST00000597493 CHMP7Q8WUX9 453 aaPredicted RBP21.51■■□□□ 1.03
C19orf48-208ENST00000597493 FBLN2P98095 1184 aa21.5■■□□□ 1.03
C19orf48-208ENST00000597493 SNAPC4Q5SXM2 1469 aa21.49■■□□□ 1.03
C19orf48-208ENST00000597493 SYNJ2O15056 1496 aa21.45■■□□□ 1.02
C19orf48-208ENST00000597493 ABCA5Q8WWZ7 1642 aa21.44■■□□□ 1.02
C19orf48-208ENST00000597493 ERICH3Q5RHP9 1530 aa21.35■■□□□ 1.01
C19orf48-208ENST00000597493 CHD1O14646 1710 aa21.35■■□□□ 1.01
C19orf48-208ENST00000597493 FHAD1B1AJZ9 1412 aa21.34■■□□□ 1.01
C19orf48-208ENST00000597493 IGF1RP08069 1367 aa21.3■■□□□ 1
C19orf48-208ENST00000597493 PBRM1Q86U86 1689 aa21.3■■□□□ 1
C19orf48-208ENST00000597493 ARHGEF11O15085 1522 aa21.29■■□□□ 1
C19orf48-208ENST00000597493 KIF27Q86VH2 1401 aa21.29■■□□□ 1
C19orf48-208ENST00000597493 CLASP1Q7Z460 1538 aa21.28■■□□□ 1
C19orf48-208ENST00000597493 GRIN2AQ12879 1464 aa21.26■□□□□ 0.99
C19orf48-208ENST00000597493 TRIM41Q8WV44 630 aa21.26■□□□□ 0.99
C19orf48-208ENST00000597493 NUP160Q12769 1436 aa21.24■□□□□ 0.99
C19orf48-208ENST00000597493 RIMBP3CA6NJZ7 1639 aa21.24■□□□□ 0.99
C19orf48-208ENST00000597493 RIMBP3BA6NNM3 1639 aa21.24■□□□□ 0.99
C19orf48-208ENST00000597493 RIMBP3Q9UFD9 1639 aa21.24■□□□□ 0.99
C19orf48-208ENST00000597493 ADAMTS12P58397 1594 aa21.23■□□□□ 0.99
C19orf48-208ENST00000597493 CYB5RLQ6IPT4 315 aa21.2■□□□□ 0.98
C19orf48-208ENST00000597493 ARAP1Q96P48 1450 aa21.12■□□□□ 0.97
C19orf48-208ENST00000597493 CARMIL1Q5VZK9 1371 aa21.11■□□□□ 0.97
C19orf48-208ENST00000597493 JPH4Q96JJ6 628 aa21.1■□□□□ 0.97
C19orf48-208ENST00000597493 CEP170Q5SW79 1584 aa21.1■□□□□ 0.97
C19orf48-208ENST00000597493 CUL7Q14999 1698 aa21.03■□□□□ 0.96
C19orf48-208ENST00000597493 KIAA0586Q9BVV6 1533 aa21.02■□□□□ 0.96
C19orf48-208ENST00000597493 SHROOM2Q13796 1616 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms