RNA–Protein interactions for RNA: ENST00000597353.5

SNRPA-203, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 5

Gene SNRPA, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-203ENST00000597353 NISCHQ9Y2I1 1504 aa53.07■■■■■ 6.09
SNRPA-203ENST00000597353 CCDC180Q9P1Z9 1646 aa47.16■■■■■ 5.14
SNRPA-203ENST00000597353 ABCC9O60706 1549 aa46.43■■■■■ 5.02
SNRPA-203ENST00000597353 RB1CC1Q8TDY2 1594 aa44.49■■■■■ 4.71
SNRPA-203ENST00000597353 NACADO15069 1562 aa44.43■■■■■ 4.7
SNRPA-203ENST00000597353 DCAF8L2P0C7V8 631 aa44.28■■■■■ 4.68
SNRPA-203ENST00000597353 ZCCHC6Q5VYS8 1495 aaKnown RBP44.19■■■■■ 4.66
SNRPA-203ENST00000597353 MYO15BQ96JP2 1530 aa44.15■■■■■ 4.66
SNRPA-203ENST00000597353 DCAF1Q9Y4B6 1507 aa43.89■■■■■ 4.62
SNRPA-203ENST00000597353 UNC13AQ9UPW8 1703 aa43.48■■■■■ 4.55
SNRPA-203ENST00000597353 PABPN1Q86U42 306 aaKnown RBP eCLIP43.37■■■■■ 4.533e-10■■■□□ 15.3
SNRPA-203ENST00000597353 BICRAQ9NZM4 1560 aa43.29■■■■■ 4.52
SNRPA-203ENST00000597353 SCRIBQ14160 1630 aa43.07■■■■■ 4.48
SNRPA-203ENST00000597353 DNAJC5BQ9UF47 199 aa42.93■■■■■ 4.46
SNRPA-203ENST00000597353 SHROOM4Q9ULL8 1493 aa42.73■■■■■ 4.43
SNRPA-203ENST00000597353 EIF4G1Q04637 1599 aaKnown RBP42.1■■■■■ 4.33
SNRPA-203ENST00000597353 CC2D2AQ9P2K1 1620 aa41.96■■■■■ 4.31
SNRPA-203ENST00000597353 CECR2Q9BXF3 1484 aa41.73■■■■■ 4.27
SNRPA-203ENST00000597353 SMARCA4P51532 1647 aa41.18■■■■■ 4.18
SNRPA-203ENST00000597353 BAZ1AQ9NRL2 1556 aaPredicted RBP41.08■■■■■ 4.17
SNRPA-203ENST00000597353 NCAPD3P42695 1498 aa41.07■■■■■ 4.16
SNRPA-203ENST00000597353 ATAD2BQ9ULI0 1458 aa41.07■■■■■ 4.16
SNRPA-203ENST00000597353 MROH2BQ7Z745 1585 aa40.93■■■■■ 4.14
SNRPA-203ENST00000597353 SMARCA2P51531 1590 aa40.92■■■■■ 4.14
SNRPA-203ENST00000597353 PEG3Q9GZU2 1588 aa40.82■■■■■ 4.13
SNRPA-203ENST00000597353 HMGXB3Q12766 1538 aa40.81■■■■■ 4.12
SNRPA-203ENST00000597353 BAZ1BQ9UIG0 1483 aaKnown RBP40.64■■■■■ 4.1
SNRPA-203ENST00000597353 WIZO95785 1651 aa40.4■■■■■ 4.06
SNRPA-203ENST00000597353 RSF1Q96T23 1441 aaPredicted RBP40.4■■■■■ 4.06
SNRPA-203ENST00000597353 NESP48681 1621 aa40.16■■■■■ 4.02
SNRPA-203ENST00000597353 TOP2AP11388 1531 aaKnown RBP39.98■■■■□ 3.99
SNRPA-203ENST00000597353 ERCC6Q03468 1493 aa39.94■■■■□ 3.98
SNRPA-203ENST00000597353 LAMC3Q9Y6N6 1575 aa39.93■■■■□ 3.98
SNRPA-203ENST00000597353 CADPSQ9ULU8 1353 aa39.84■■■■□ 3.97
SNRPA-203ENST00000597353 PDS5BQ9NTI5 1447 aa39.67■■■■□ 3.94
SNRPA-203ENST00000597353 CUX2O14529 1486 aa39.65■■■■□ 3.94
SNRPA-203ENST00000597353 CFTRP13569 1480 aa39.59■■■■□ 3.93
SNRPA-203ENST00000597353 KIF21AQ7Z4S6 1674 aa39.57■■■■□ 3.93
SNRPA-203ENST00000597353 THOC2Q8NI27 1593 aaKnown RBP39.57■■■■□ 3.92
SNRPA-203ENST00000597353 CCDC88BA6NC98 1476 aa39.55■■■■□ 3.92
SNRPA-203ENST00000597353 FANCD2Q9BXW9 1451 aa39.37■■■■□ 3.89
SNRPA-203ENST00000597353 MRC2Q9UBG0 1479 aa39.31■■■■□ 3.88
SNRPA-203ENST00000597353 CEP164Q9UPV0 1460 aa39.3■■■■□ 3.88
SNRPA-203ENST00000597353 WDR62O43379 1518 aa39.22■■■■□ 3.87
SNRPA-203ENST00000597353 SUPT5HO00267 1087 aaKnown RBP39.1■■■■□ 3.85
SNRPA-203ENST00000597353 PRDM2Q13029 1718 aa39.09■■■■□ 3.85
SNRPA-203ENST00000597353 URB2Q14146 1524 aaKnown RBP39.04■■■■□ 3.84
SNRPA-203ENST00000597353 TOPBP1Q92547 1522 aa38.73■■■■□ 3.79
SNRPA-203ENST00000597353 DNAJC5Q9H3Z4 198 aa38.71■■■■□ 3.79
SNRPA-203ENST00000597353 DNMBPQ6XZF7 1577 aa38.63■■■■□ 3.77
SNRPA-203ENST00000597353 ABCC8Q09428 1581 aa38.62■■■■□ 3.77
SNRPA-203ENST00000597353 IFT140Q96RY7 1462 aa38.51■■■■□ 3.76
SNRPA-203ENST00000597353 ZNF608Q9ULD9 1512 aaPredicted RBP38.43■■■■□ 3.74
SNRPA-203ENST00000597353 CUX1P39880 1505 aa38.41■■■■□ 3.74
SNRPA-203ENST00000597353 POLA1P09884 1462 aaPredicted RBP38.41■■■■□ 3.74
SNRPA-203ENST00000597353 TARBP1Q13395 1621 aaKnown RBP38.33■■■■□ 3.73
SNRPA-203ENST00000597353 FGD5Q6ZNL6 1462 aa38.26■■■■□ 3.72
SNRPA-203ENST00000597353 RAD54L2Q9Y4B4 1467 aa38.25■■■■□ 3.71
SNRPA-203ENST00000597353 SOGA1O94964 1423 aa38.2■■■■□ 3.71
SNRPA-203ENST00000597353 EIF4G3O43432 1585 aaKnown RBP38.19■■■■□ 3.7
SNRPA-203ENST00000597353 AQRO60306 1485 aaKnown RBP eCLIP38.15■■■■□ 3.71e-6■■■■■ 30.7
SNRPA-203ENST00000597353 TDRD9Q8NDG6 1382 aaKnown RBP38.05■■■■□ 3.68
SNRPA-203ENST00000597353 WRNQ14191 1432 aaPredicted RBP eCLIP38.03■■■■□ 3.68
SNRPA-203ENST00000597353 SYNJ1O43426 1573 aa37.97■■■■□ 3.67
SNRPA-203ENST00000597353 TOP2BQ02880 1626 aa37.95■■■■□ 3.67
SNRPA-203ENST00000597353 OSCARQ8IYS5 282 aa37.94■■■■□ 3.66
SNRPA-203ENST00000597353 WDR97A6NE52 1622 aa37.94■■■■□ 3.66
SNRPA-203ENST00000597353 BIVM-ERCC5R4GMW8 1640 aa37.94■■■■□ 3.66
SNRPA-203ENST00000597353 ABCA10Q8WWZ4 1543 aa37.89■■■■□ 3.66
SNRPA-203ENST00000597353 SNAPC4Q5SXM2 1469 aa37.78■■■■□ 3.64
SNRPA-203ENST00000597353 GRIN2BQ13224 1484 aa37.77■■■■□ 3.64
SNRPA-203ENST00000597353 GAPVD1Q14C86 1478 aa37.76■■■■□ 3.63
SNRPA-203ENST00000597353 ABCA5Q8WWZ7 1642 aa37.75■■■■□ 3.63
SNRPA-203ENST00000597353 MAGI1Q96QZ7 1491 aaPredicted RBP37.7■■■■□ 3.63
SNRPA-203ENST00000597353 CHD1O14646 1710 aa37.68■■■■□ 3.62
SNRPA-203ENST00000597353 FBLN2P98095 1184 aa37.62■■■■□ 3.61
SNRPA-203ENST00000597353 PBRM1Q86U86 1689 aa37.61■■■■□ 3.61
SNRPA-203ENST00000597353 SYNJ2O15056 1496 aa37.56■■■■□ 3.6
SNRPA-203ENST00000597353 CHMP7Q8WUX9 453 aaPredicted RBP37.5■■■■□ 3.59
SNRPA-203ENST00000597353 ADAMTS12P58397 1594 aa37.4■■■■□ 3.58
SNRPA-203ENST00000597353 ERICH3Q5RHP9 1530 aa37.4■■■■□ 3.58
SNRPA-203ENST00000597353 ARHGEF11O15085 1522 aa37.39■■■■□ 3.58
SNRPA-203ENST00000597353 CLASP1Q7Z460 1538 aa37.39■■■■□ 3.58
SNRPA-203ENST00000597353 RIMBP3CA6NJZ7 1639 aa37.39■■■■□ 3.58
SNRPA-203ENST00000597353 RIMBP3BA6NNM3 1639 aa37.39■■■■□ 3.58
SNRPA-203ENST00000597353 RIMBP3Q9UFD9 1639 aa37.39■■■■□ 3.58
SNRPA-203ENST00000597353 FHAD1B1AJZ9 1412 aa37.32■■■■□ 3.56
SNRPA-203ENST00000597353 GRIN2AQ12879 1464 aa37.31■■■■□ 3.56
SNRPA-203ENST00000597353 TRIM41Q8WV44 630 aa37.28■■■■□ 3.56
SNRPA-203ENST00000597353 KIF27Q86VH2 1401 aa37.21■■■■□ 3.55
SNRPA-203ENST00000597353 NUP160Q12769 1436 aa37.2■■■■□ 3.55
SNRPA-203ENST00000597353 IGF1RP08069 1367 aa37.18■■■■□ 3.54
SNRPA-203ENST00000597353 CEP170Q5SW79 1584 aa37.15■■■■□ 3.54
SNRPA-203ENST00000597353 ARAP1Q96P48 1450 aa37.13■■■■□ 3.53
SNRPA-203ENST00000597353 CYB5RLQ6IPT4 315 aa37.01■■■■□ 3.52
SNRPA-203ENST00000597353 CUL7Q14999 1698 aa36.96■■■■□ 3.51
SNRPA-203ENST00000597353 RUSC2Q8N2Y8 1516 aa36.93■■■■□ 3.5
SNRPA-203ENST00000597353 CARMIL1Q5VZK9 1371 aa36.9■■■■□ 3.5
SNRPA-203ENST00000597353 SHROOM2Q13796 1616 aa36.89■■■■□ 3.5
SNRPA-203ENST00000597353 ERCC6L2Q5T890 1561 aa36.89■■■■□ 3.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms