RNA–Protein interactions for RNA: ENST00000596902.1

PHLDB3-205, Transcript of pleckstrin homology like domain family B member 3, humanhuman

TSL 1 (best)

Gene PHLDB3, Length 808 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHLDB3-205ENST00000596902 NISCHQ9Y2I1 1504 aa56.51■■■■■ 6.64
PHLDB3-205ENST00000596902 CCDC180Q9P1Z9 1646 aa50.54■■■■■ 5.68
PHLDB3-205ENST00000596902 ABCC9O60706 1549 aa50.15■■■■■ 5.62
PHLDB3-205ENST00000596902 RB1CC1Q8TDY2 1594 aa47.9■■■■■ 5.26
PHLDB3-205ENST00000596902 NACADO15069 1562 aa47.67■■■■■ 5.22
PHLDB3-205ENST00000596902 DCAF8L2P0C7V8 631 aa47.58■■■■■ 5.21
PHLDB3-205ENST00000596902 MYO15BQ96JP2 1530 aa47.11■■■■■ 5.13
PHLDB3-205ENST00000596902 UNC13AQ9UPW8 1703 aa46.94■■■■■ 5.11
PHLDB3-205ENST00000596902 ZCCHC6Q5VYS8 1495 aaKnown RBP46.89■■■■■ 5.1
PHLDB3-205ENST00000596902 PABPN1Q86U42 306 aaKnown RBP eCLIP46.78■■■■■ 5.08
PHLDB3-205ENST00000596902 DNAJC5BQ9UF47 199 aa46.71■■■■■ 5.07
PHLDB3-205ENST00000596902 DCAF1Q9Y4B6 1507 aa46.68■■■■■ 5.06
PHLDB3-205ENST00000596902 BICRAQ9NZM4 1560 aa46.52■■■■■ 5.04
PHLDB3-205ENST00000596902 SCRIBQ14160 1630 aa46.09■■■■■ 4.97
PHLDB3-205ENST00000596902 SHROOM4Q9ULL8 1493 aa45.84■■■■■ 4.93
PHLDB3-205ENST00000596902 CC2D2AQ9P2K1 1620 aa45.34■■■■■ 4.85
PHLDB3-205ENST00000596902 EIF4G1Q04637 1599 aaKnown RBP45.32■■■■■ 4.85
PHLDB3-205ENST00000596902 CECR2Q9BXF3 1484 aa45.1■■■■■ 4.81
PHLDB3-205ENST00000596902 SMARCA4P51532 1647 aa44.01■■■■■ 4.64
PHLDB3-205ENST00000596902 NCAPD3P42695 1498 aa44■■■■■ 4.63
PHLDB3-205ENST00000596902 ATAD2BQ9ULI0 1458 aa43.93■■■■■ 4.62
PHLDB3-205ENST00000596902 BAZ1AQ9NRL2 1556 aaPredicted RBP43.83■■■■■ 4.61
PHLDB3-205ENST00000596902 SMARCA2P51531 1590 aa43.82■■■■■ 4.61
PHLDB3-205ENST00000596902 HMGXB3Q12766 1538 aa43.69■■■■■ 4.59
PHLDB3-205ENST00000596902 MROH2BQ7Z745 1585 aa43.56■■■■■ 4.56
PHLDB3-205ENST00000596902 PEG3Q9GZU2 1588 aa43.55■■■■■ 4.56
PHLDB3-205ENST00000596902 BAZ1BQ9UIG0 1483 aaKnown RBP43.52■■■■■ 4.56
PHLDB3-205ENST00000596902 ERCC6Q03468 1493 aa43.25■■■■■ 4.51
PHLDB3-205ENST00000596902 NESP48681 1621 aa43.21■■■■■ 4.51
PHLDB3-205ENST00000596902 WIZO95785 1651 aa43.1■■■■■ 4.49
PHLDB3-205ENST00000596902 CUX2O14529 1486 aa43.01■■■■■ 4.48
PHLDB3-205ENST00000596902 LAMC3Q9Y6N6 1575 aa42.95■■■■■ 4.47
PHLDB3-205ENST00000596902 RSF1Q96T23 1441 aaPredicted RBP42.8■■■■■ 4.44
PHLDB3-205ENST00000596902 KIF21AQ7Z4S6 1674 aa42.7■■■■■ 4.43
PHLDB3-205ENST00000596902 CADPSQ9ULU8 1353 aa42.68■■■■■ 4.42
PHLDB3-205ENST00000596902 PDS5BQ9NTI5 1447 aa42.68■■■■■ 4.42
PHLDB3-205ENST00000596902 THOC2Q8NI27 1593 aaKnown RBP42.67■■■■■ 4.42
PHLDB3-205ENST00000596902 DNAJC5Q9H3Z4 198 aa42.57■■■■■ 4.41
PHLDB3-205ENST00000596902 TOP2AP11388 1531 aaKnown RBP42.52■■■■■ 4.4
PHLDB3-205ENST00000596902 CFTRP13569 1480 aa42.28■■■■■ 4.36
PHLDB3-205ENST00000596902 MRC2Q9UBG0 1479 aa42.28■■■■■ 4.36
PHLDB3-205ENST00000596902 FANCD2Q9BXW9 1451 aa42.2■■■■■ 4.35
PHLDB3-205ENST00000596902 CEP164Q9UPV0 1460 aa42.2■■■■■ 4.35
PHLDB3-205ENST00000596902 WDR62O43379 1518 aa42.16■■■■■ 4.34
PHLDB3-205ENST00000596902 CCDC88BA6NC98 1476 aa42.06■■■■■ 4.32
PHLDB3-205ENST00000596902 PRDM2Q13029 1718 aa41.99■■■■■ 4.31
PHLDB3-205ENST00000596902 URB2Q14146 1524 aaKnown RBP41.84■■■■■ 4.29
PHLDB3-205ENST00000596902 TOPBP1Q92547 1522 aa41.46■■■■■ 4.23
PHLDB3-205ENST00000596902 ABCC8Q09428 1581 aa41.38■■■■■ 4.22
PHLDB3-205ENST00000596902 IFT140Q96RY7 1462 aa41.34■■■■■ 4.21
PHLDB3-205ENST00000596902 DNMBPQ6XZF7 1577 aa41.33■■■■■ 4.21
PHLDB3-205ENST00000596902 SUPT5HO00267 1087 aaKnown RBP41.26■■■■■ 4.2
PHLDB3-205ENST00000596902 ZNF608Q9ULD9 1512 aaPredicted RBP41.26■■■■■ 4.2
PHLDB3-205ENST00000596902 OSCARQ8IYS5 282 aa41.16■■■■■ 4.18
PHLDB3-205ENST00000596902 TARBP1Q13395 1621 aaKnown RBP41.07■■■■■ 4.17
PHLDB3-205ENST00000596902 EIF4G3O43432 1585 aaKnown RBP41.04■■■■■ 4.16
PHLDB3-205ENST00000596902 POLA1P09884 1462 aaPredicted RBP41.04■■■■■ 4.16
PHLDB3-205ENST00000596902 AQRO60306 1485 aaKnown RBP eCLIP40.95■■■■■ 4.155e-7■■■■■ 29
PHLDB3-205ENST00000596902 RAD54L2Q9Y4B4 1467 aa40.92■■■■■ 4.14
PHLDB3-205ENST00000596902 CUX1P39880 1505 aa40.9■■■■■ 4.14
PHLDB3-205ENST00000596902 TRIM41Q8WV44 630 aa40.89■■■■■ 4.14
PHLDB3-205ENST00000596902 SOGA1O94964 1423 aa40.89■■■■■ 4.14
PHLDB3-205ENST00000596902 FGD5Q6ZNL6 1462 aa40.85■■■■■ 4.13
PHLDB3-205ENST00000596902 TDRD9Q8NDG6 1382 aaKnown RBP40.76■■■■■ 4.12
PHLDB3-205ENST00000596902 CHD1O14646 1710 aa40.73■■■■■ 4.11
PHLDB3-205ENST00000596902 WDR97A6NE52 1622 aa40.64■■■■■ 4.1
PHLDB3-205ENST00000596902 FBLN2P98095 1184 aa40.61■■■■■ 4.09
PHLDB3-205ENST00000596902 RIMBP3CA6NJZ7 1639 aa40.6■■■■■ 4.09
PHLDB3-205ENST00000596902 RIMBP3BA6NNM3 1639 aa40.6■■■■■ 4.09
PHLDB3-205ENST00000596902 RIMBP3Q9UFD9 1639 aa40.6■■■■■ 4.09
PHLDB3-205ENST00000596902 SNAPC4Q5SXM2 1469 aa40.51■■■■■ 4.08
PHLDB3-205ENST00000596902 ARHGEF11O15085 1522 aa40.47■■■■■ 4.07
PHLDB3-205ENST00000596902 GRIN2BQ13224 1484 aa40.46■■■■■ 4.07
PHLDB3-205ENST00000596902 MAGI1Q96QZ7 1491 aaPredicted RBP40.41■■■■■ 4.06
PHLDB3-205ENST00000596902 ABCA10Q8WWZ4 1543 aa40.41■■■■■ 4.06
PHLDB3-205ENST00000596902 PBRM1Q86U86 1689 aa40.4■■■■■ 4.06
PHLDB3-205ENST00000596902 GAPVD1Q14C86 1478 aa40.39■■■■■ 4.06
PHLDB3-205ENST00000596902 BIVM-ERCC5R4GMW8 1640 aa40.37■■■■■ 4.05
PHLDB3-205ENST00000596902 CHMP7Q8WUX9 453 aaPredicted RBP40.36■■■■■ 4.05
PHLDB3-205ENST00000596902 TOP2BQ02880 1626 aa40.35■■■■■ 4.05
PHLDB3-205ENST00000596902 WRNQ14191 1432 aaPredicted RBP eCLIP40.35■■■■■ 4.05
PHLDB3-205ENST00000596902 SYNJ1O43426 1573 aa40.32■■■■■ 4.05
PHLDB3-205ENST00000596902 ABCA5Q8WWZ7 1642 aa40.32■■■■■ 4.05
PHLDB3-205ENST00000596902 SYNJ2O15056 1496 aa40.27■■■■■ 4.04
PHLDB3-205ENST00000596902 CLASP1Q7Z460 1538 aa40.2■■■■■ 4.03
PHLDB3-205ENST00000596902 CYB5RLQ6IPT4 315 aa40.19■■■■■ 4.02
PHLDB3-205ENST00000596902 ARAP1Q96P48 1450 aa40.11■■■■■ 4.01
PHLDB3-205ENST00000596902 ADAMTS12P58397 1594 aa39.98■■■■□ 3.99
PHLDB3-205ENST00000596902 GRIN2AQ12879 1464 aa39.94■■■■□ 3.98
PHLDB3-205ENST00000596902 ERICH3Q5RHP9 1530 aa39.91■■■■□ 3.98
PHLDB3-205ENST00000596902 FHAD1B1AJZ9 1412 aa39.88■■■■□ 3.97
PHLDB3-205ENST00000596902 CEP170Q5SW79 1584 aa39.8■■■■□ 3.96
PHLDB3-205ENST00000596902 NUP160Q12769 1436 aa39.79■■■■□ 3.96
PHLDB3-205ENST00000596902 ERCC6L2Q5T890 1561 aa39.64■■■■□ 3.94
PHLDB3-205ENST00000596902 TRHP20396 242 aaPredicted RBP39.61■■■■□ 3.93
PHLDB3-205ENST00000596902 SHROOM2Q13796 1616 aa39.59■■■■□ 3.93
PHLDB3-205ENST00000596902 KIF27Q86VH2 1401 aa39.56■■■■□ 3.92
PHLDB3-205ENST00000596902 IGF1RP08069 1367 aa39.52■■■■□ 3.92
PHLDB3-205ENST00000596902 JPH4Q96JJ6 628 aa39.43■■■■□ 3.9
PHLDB3-205ENST00000596902 CUL7Q14999 1698 aa39.43■■■■□ 3.9
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms