RNA–Protein interactions for RNA: ENST00000596605.1

CLPP-205, Transcript of caseinolytic mitochondrial matrix peptidase proteolytic subunit, humanhuman

TSL 2 BASIC

Gene CLPP, Length 646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPP-205ENST00000596605 NISCHQ9Y2I1 1504 aa31.73■■■□□ 2.67
CLPP-205ENST00000596605 ABCC9O60706 1549 aa28.7■■■□□ 2.19
CLPP-205ENST00000596605 CCDC180Q9P1Z9 1646 aa28.54■■■□□ 2.16
CLPP-205ENST00000596605 RB1CC1Q8TDY2 1594 aa27.26■■□□□ 1.95
CLPP-205ENST00000596605 NACADO15069 1562 aa27.03■■□□□ 1.92
CLPP-205ENST00000596605 DNAJC5BQ9UF47 199 aa27.03■■□□□ 1.92
CLPP-205ENST00000596605 DCAF8L2P0C7V8 631 aa26.85■■□□□ 1.89
CLPP-205ENST00000596605 PABPN1Q86U42 306 aaKnown RBP eCLIP26.69■■□□□ 1.86
CLPP-205ENST00000596605 MYO15BQ96JP2 1530 aa26.61■■□□□ 1.85
CLPP-205ENST00000596605 UNC13AQ9UPW8 1703 aa26.59■■□□□ 1.85
CLPP-205ENST00000596605 BICRAQ9NZM4 1560 aa26.45■■□□□ 1.82
CLPP-205ENST00000596605 ZCCHC6Q5VYS8 1495 aaKnown RBP26.28■■□□□ 1.8
CLPP-205ENST00000596605 DCAF1Q9Y4B6 1507 aa26.2■■□□□ 1.79
CLPP-205ENST00000596605 SHROOM4Q9ULL8 1493 aa26.12■■□□□ 1.77
CLPP-205ENST00000596605 SCRIBQ14160 1630 aa26■■□□□ 1.75
CLPP-205ENST00000596605 CC2D2AQ9P2K1 1620 aa25.92■■□□□ 1.74
CLPP-205ENST00000596605 CECR2Q9BXF3 1484 aa25.88■■□□□ 1.73
CLPP-205ENST00000596605 EIF4G1Q04637 1599 aaKnown RBP25.83■■□□□ 1.73
CLPP-205ENST00000596605 DNAJC5Q9H3Z4 198 aa24.96■■□□□ 1.59
CLPP-205ENST00000596605 NCAPD3P42695 1498 aa24.96■■□□□ 1.59
CLPP-205ENST00000596605 ATAD2BQ9ULI0 1458 aa24.86■■□□□ 1.57
CLPP-205ENST00000596605 CUX2O14529 1486 aa24.82■■□□□ 1.56
CLPP-205ENST00000596605 ERCC6Q03468 1493 aa24.82■■□□□ 1.56
CLPP-205ENST00000596605 SMARCA2P51531 1590 aa24.79■■□□□ 1.56
CLPP-205ENST00000596605 SMARCA4P51532 1647 aa24.79■■□□□ 1.56
CLPP-205ENST00000596605 HMGXB3Q12766 1538 aa24.76■■□□□ 1.55
CLPP-205ENST00000596605 BAZ1AQ9NRL2 1556 aaPredicted RBP24.65■■□□□ 1.54
CLPP-205ENST00000596605 BAZ1BQ9UIG0 1483 aaKnown RBP24.62■■□□□ 1.53
CLPP-205ENST00000596605 NESP48681 1621 aa24.6■■□□□ 1.53
CLPP-205ENST00000596605 PEG3Q9GZU2 1588 aa24.55■■□□□ 1.52
CLPP-205ENST00000596605 MROH2BQ7Z745 1585 aa24.44■■□□□ 1.5
CLPP-205ENST00000596605 LAMC3Q9Y6N6 1575 aa24.42■■□□□ 1.5
CLPP-205ENST00000596605 THOC2Q8NI27 1593 aaKnown RBP24.39■■□□□ 1.5
CLPP-205ENST00000596605 PDS5BQ9NTI5 1447 aa24.29■■□□□ 1.48
CLPP-205ENST00000596605 KIF21AQ7Z4S6 1674 aa24.27■■□□□ 1.48
CLPP-205ENST00000596605 CADPSQ9ULU8 1353 aa24.19■■□□□ 1.46
CLPP-205ENST00000596605 WIZO95785 1651 aa24.13■■□□□ 1.45
CLPP-205ENST00000596605 MRC2Q9UBG0 1479 aa24.09■■□□□ 1.45
CLPP-205ENST00000596605 WDR62O43379 1518 aa24.04■■□□□ 1.44
CLPP-205ENST00000596605 CEP164Q9UPV0 1460 aa23.97■■□□□ 1.43
CLPP-205ENST00000596605 FANCD2Q9BXW9 1451 aa23.92■■□□□ 1.42
CLPP-205ENST00000596605 CFTRP13569 1480 aa23.88■■□□□ 1.41
CLPP-205ENST00000596605 RSF1Q96T23 1441 aaPredicted RBP23.88■■□□□ 1.41
CLPP-205ENST00000596605 TOP2AP11388 1531 aaKnown RBP23.84■■□□□ 1.41
CLPP-205ENST00000596605 TRIM41Q8WV44 630 aa23.82■■□□□ 1.4
CLPP-205ENST00000596605 URB2Q14146 1524 aaKnown RBP23.72■■□□□ 1.39
CLPP-205ENST00000596605 OSCARQ8IYS5 282 aa23.64■■□□□ 1.37
CLPP-205ENST00000596605 PRDM2Q13029 1718 aa23.6■■□□□ 1.37
CLPP-205ENST00000596605 CCDC88BA6NC98 1476 aa23.56■■□□□ 1.36
CLPP-205ENST00000596605 IFT140Q96RY7 1462 aa23.49■■□□□ 1.35
CLPP-205ENST00000596605 TOPBP1Q92547 1522 aa23.45■■□□□ 1.34
CLPP-205ENST00000596605 ZNF608Q9ULD9 1512 aaPredicted RBP23.45■■□□□ 1.34
CLPP-205ENST00000596605 ABCC8Q09428 1581 aa23.4■■□□□ 1.34
CLPP-205ENST00000596605 DNMBPQ6XZF7 1577 aa23.35■■□□□ 1.33
CLPP-205ENST00000596605 RIMBP3CA6NJZ7 1639 aa23.34■■□□□ 1.33
CLPP-205ENST00000596605 RIMBP3BA6NNM3 1639 aa23.34■■□□□ 1.33
CLPP-205ENST00000596605 RIMBP3Q9UFD9 1639 aa23.34■■□□□ 1.33
CLPP-205ENST00000596605 EIF4G3O43432 1585 aaKnown RBP23.33■■□□□ 1.33
CLPP-205ENST00000596605 SUPT5HO00267 1087 aaKnown RBP23.32■■□□□ 1.32
CLPP-205ENST00000596605 ARHGEF11O15085 1522 aa23.28■■□□□ 1.32
CLPP-205ENST00000596605 TARBP1Q13395 1621 aaKnown RBP23.23■■□□□ 1.31
CLPP-205ENST00000596605 AQRO60306 1485 aaKnown RBP eCLIP23.23■■□□□ 1.316e-7■■■□□ 19.1
CLPP-205ENST00000596605 POLA1P09884 1462 aaPredicted RBP23.2■■□□□ 1.3
CLPP-205ENST00000596605 CHD1O14646 1710 aa23.16■■□□□ 1.3
CLPP-205ENST00000596605 FBLN2P98095 1184 aa23.11■■□□□ 1.29
CLPP-205ENST00000596605 RAD54L2Q9Y4B4 1467 aa23.11■■□□□ 1.29
CLPP-205ENST00000596605 CYB5RLQ6IPT4 315 aa23.1■■□□□ 1.29
CLPP-205ENST00000596605 SOGA1O94964 1423 aa23.08■■□□□ 1.29
CLPP-205ENST00000596605 TDRD9Q8NDG6 1382 aaKnown RBP23.06■■□□□ 1.28
CLPP-205ENST00000596605 FGD5Q6ZNL6 1462 aa23.04■■□□□ 1.28
CLPP-205ENST00000596605 ARAP1Q96P48 1450 aa23.03■■□□□ 1.28
CLPP-205ENST00000596605 WDR97A6NE52 1622 aa23.01■■□□□ 1.27
CLPP-205ENST00000596605 SNAPC4Q5SXM2 1469 aa23■■□□□ 1.27
CLPP-205ENST00000596605 CUX1P39880 1505 aa22.98■■□□□ 1.27
CLPP-205ENST00000596605 MAGI1Q96QZ7 1491 aaPredicted RBP22.93■■□□□ 1.26
CLPP-205ENST00000596605 CHMP7Q8WUX9 453 aaPredicted RBP22.92■■□□□ 1.26
CLPP-205ENST00000596605 GRIN2BQ13224 1484 aa22.92■■□□□ 1.26
CLPP-205ENST00000596605 TRHP20396 242 aaPredicted RBP22.91■■□□□ 1.26
CLPP-205ENST00000596605 CLASP1Q7Z460 1538 aa22.91■■□□□ 1.26
CLPP-205ENST00000596605 SYNJ1O43426 1573 aa22.9■■□□□ 1.26
CLPP-205ENST00000596605 SYNJ2O15056 1496 aa22.86■■□□□ 1.25
CLPP-205ENST00000596605 GAPVD1Q14C86 1478 aa22.81■■□□□ 1.24
CLPP-205ENST00000596605 PBRM1Q86U86 1689 aa22.79■■□□□ 1.24
CLPP-205ENST00000596605 ABCA10Q8WWZ4 1543 aa22.77■■□□□ 1.24
CLPP-205ENST00000596605 ABCA5Q8WWZ7 1642 aa22.74■■□□□ 1.23
CLPP-205ENST00000596605 WRNQ14191 1432 aaPredicted RBP eCLIP22.65■■□□□ 1.22
CLPP-205ENST00000596605 GRIN2AQ12879 1464 aa22.62■■□□□ 1.21
CLPP-205ENST00000596605 ADAMTS12P58397 1594 aa22.59■■□□□ 1.21
CLPP-205ENST00000596605 TOP2BQ02880 1626 aa22.57■■□□□ 1.2
CLPP-205ENST00000596605 BIVM-ERCC5R4GMW8 1640 aa22.57■■□□□ 1.2
CLPP-205ENST00000596605 NUP160Q12769 1436 aa22.55■■□□□ 1.2
CLPP-205ENST00000596605 CEP170Q5SW79 1584 aa22.54■■□□□ 1.2
CLPP-205ENST00000596605 ERCC6L2Q5T890 1561 aa22.53■■□□□ 1.2
CLPP-205ENST00000596605 FHAD1B1AJZ9 1412 aa22.52■■□□□ 1.2
CLPP-205ENST00000596605 ERICH3Q5RHP9 1530 aa22.47■■□□□ 1.19
CLPP-205ENST00000596605 SHROOM2Q13796 1616 aa22.45■■□□□ 1.18
CLPP-205ENST00000596605 AEBP2Q6ZN18 517 aaPredicted RBP22.36■■□□□ 1.17
CLPP-205ENST00000596605 PRG4Q92954 1404 aaPredicted RBP22.34■■□□□ 1.17
CLPP-205ENST00000596605 JPH4Q96JJ6 628 aa22.31■■□□□ 1.16
CLPP-205ENST00000596605 CHIC1Q5VXU3 224 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms