RNA–Protein interactions for RNA: ENST00000596502.1

DDX49-205, Transcript of DEAD-box helicase 49, humanhuman

TSL 2

Gene DDX49, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-205ENST00000596502 NISCHQ9Y2I1 1504 aa36.55■■■■□ 3.44
DDX49-205ENST00000596502 ABCC9O60706 1549 aa33.15■■■□□ 2.9
DDX49-205ENST00000596502 CCDC180Q9P1Z9 1646 aa32.88■■■□□ 2.85
DDX49-205ENST00000596502 RB1CC1Q8TDY2 1594 aa31.42■■■□□ 2.62
DDX49-205ENST00000596502 DNAJC5BQ9UF47 199 aa31.29■■■□□ 2.6
DDX49-205ENST00000596502 NACADO15069 1562 aa31.13■■■□□ 2.57
DDX49-205ENST00000596502 DCAF8L2P0C7V8 631 aa31.07■■■□□ 2.56
DDX49-205ENST00000596502 PABPN1Q86U42 306 aaKnown RBP eCLIP30.86■■■□□ 2.53
DDX49-205ENST00000596502 UNC13AQ9UPW8 1703 aa30.78■■■□□ 2.52
DDX49-205ENST00000596502 MYO15BQ96JP2 1530 aa30.57■■■□□ 2.49
DDX49-205ENST00000596502 BICRAQ9NZM4 1560 aa30.52■■■□□ 2.48
DDX49-205ENST00000596502 ZCCHC6Q5VYS8 1495 aaKnown RBP30.23■■■□□ 2.43
DDX49-205ENST00000596502 DCAF1Q9Y4B6 1507 aa30.13■■■□□ 2.41
DDX49-205ENST00000596502 SCRIBQ14160 1630 aa30.01■■■□□ 2.39
DDX49-205ENST00000596502 SHROOM4Q9ULL8 1493 aa30■■■□□ 2.39
DDX49-205ENST00000596502 CC2D2AQ9P2K1 1620 aa29.92■■■□□ 2.38
DDX49-205ENST00000596502 CECR2Q9BXF3 1484 aa29.86■■■□□ 2.37
DDX49-205ENST00000596502 EIF4G1Q04637 1599 aaKnown RBP29.79■■■□□ 2.36
DDX49-205ENST00000596502 DNAJC5Q9H3Z4 198 aa28.87■■■□□ 2.21
DDX49-205ENST00000596502 NCAPD3P42695 1498 aa28.73■■■□□ 2.19
DDX49-205ENST00000596502 ATAD2BQ9ULI0 1458 aa28.64■■■□□ 2.17
DDX49-205ENST00000596502 ERCC6Q03468 1493 aa28.63■■■□□ 2.17
DDX49-205ENST00000596502 CUX2O14529 1486 aa28.59■■■□□ 2.17
DDX49-205ENST00000596502 SMARCA4P51532 1647 aa28.58■■■□□ 2.17
DDX49-205ENST00000596502 SMARCA2P51531 1590 aa28.54■■■□□ 2.16
DDX49-205ENST00000596502 HMGXB3Q12766 1538 aa28.5■■■□□ 2.15
DDX49-205ENST00000596502 NESP48681 1621 aa28.43■■■□□ 2.14
DDX49-205ENST00000596502 BAZ1AQ9NRL2 1556 aaPredicted RBP28.38■■■□□ 2.13
DDX49-205ENST00000596502 BAZ1BQ9UIG0 1483 aaKnown RBP28.37■■■□□ 2.13
DDX49-205ENST00000596502 PEG3Q9GZU2 1588 aa28.25■■■□□ 2.11
DDX49-205ENST00000596502 MROH2BQ7Z745 1585 aa28.19■■■□□ 2.1
DDX49-205ENST00000596502 THOC2Q8NI27 1593 aaKnown RBP28.14■■■□□ 2.1
DDX49-205ENST00000596502 LAMC3Q9Y6N6 1575 aa28.14■■■□□ 2.1
DDX49-205ENST00000596502 KIF21AQ7Z4S6 1674 aa28.07■■■□□ 2.08
DDX49-205ENST00000596502 PDS5BQ9NTI5 1447 aa28■■■□□ 2.07
DDX49-205ENST00000596502 WIZO95785 1651 aa27.87■■■□□ 2.05
DDX49-205ENST00000596502 CADPSQ9ULU8 1353 aa27.87■■■□□ 2.05
DDX49-205ENST00000596502 MRC2Q9UBG0 1479 aa27.76■■■□□ 2.04
DDX49-205ENST00000596502 WDR62O43379 1518 aa27.68■■■□□ 2.02
DDX49-205ENST00000596502 CEP164Q9UPV0 1460 aa27.62■■■□□ 2.01
DDX49-205ENST00000596502 TRIM41Q8WV44 630 aa27.59■■■□□ 2.01
DDX49-205ENST00000596502 FANCD2Q9BXW9 1451 aa27.57■■■□□ 2
DDX49-205ENST00000596502 RSF1Q96T23 1441 aaPredicted RBP27.51■■□□□ 1.99
DDX49-205ENST00000596502 CFTRP13569 1480 aa27.5■■□□□ 1.99
DDX49-205ENST00000596502 TOP2AP11388 1531 aaKnown RBP27.44■■□□□ 1.98
DDX49-205ENST00000596502 URB2Q14146 1524 aaKnown RBP27.36■■□□□ 1.97
DDX49-205ENST00000596502 OSCARQ8IYS5 282 aa27.31■■□□□ 1.96
DDX49-205ENST00000596502 PRDM2Q13029 1718 aa27.27■■□□□ 1.96
DDX49-205ENST00000596502 CCDC88BA6NC98 1476 aa27.16■■□□□ 1.94
DDX49-205ENST00000596502 ZNF608Q9ULD9 1512 aaPredicted RBP27.07■■□□□ 1.92
DDX49-205ENST00000596502 IFT140Q96RY7 1462 aa27.06■■□□□ 1.92
DDX49-205ENST00000596502 TOPBP1Q92547 1522 aa27.02■■□□□ 1.92
DDX49-205ENST00000596502 RIMBP3CA6NJZ7 1639 aa26.98■■□□□ 1.91
DDX49-205ENST00000596502 RIMBP3BA6NNM3 1639 aa26.98■■□□□ 1.91
DDX49-205ENST00000596502 RIMBP3Q9UFD9 1639 aa26.98■■□□□ 1.91
DDX49-205ENST00000596502 ABCC8Q09428 1581 aa26.92■■□□□ 1.9
DDX49-205ENST00000596502 EIF4G3O43432 1585 aaKnown RBP26.9■■□□□ 1.9
DDX49-205ENST00000596502 DNMBPQ6XZF7 1577 aa26.9■■□□□ 1.9
DDX49-205ENST00000596502 ARHGEF11O15085 1522 aa26.85■■□□□ 1.89
DDX49-205ENST00000596502 AQRO60306 1485 aaKnown RBP eCLIP26.81■■□□□ 1.88
DDX49-205ENST00000596502 TARBP1Q13395 1621 aaKnown RBP26.8■■□□□ 1.88
DDX49-205ENST00000596502 CHD1O14646 1710 aa26.79■■□□□ 1.88
DDX49-205ENST00000596502 FBLN2P98095 1184 aa26.73■■□□□ 1.87
DDX49-205ENST00000596502 POLA1P09884 1462 aaPredicted RBP26.73■■□□□ 1.87
DDX49-205ENST00000596502 CYB5RLQ6IPT4 315 aa26.72■■□□□ 1.87
DDX49-205ENST00000596502 RAD54L2Q9Y4B4 1467 aa26.68■■□□□ 1.86
DDX49-205ENST00000596502 TDRD9Q8NDG6 1382 aaKnown RBP26.62■■□□□ 1.85
DDX49-205ENST00000596502 SOGA1O94964 1423 aa26.62■■□□□ 1.85
DDX49-205ENST00000596502 ARAP1Q96P48 1450 aa26.58■■□□□ 1.85
DDX49-205ENST00000596502 FGD5Q6ZNL6 1462 aa26.55■■□□□ 1.84
DDX49-205ENST00000596502 TRHP20396 242 aaPredicted RBP26.52■■□□□ 1.84
DDX49-205ENST00000596502 SNAPC4Q5SXM2 1469 aa26.51■■□□□ 1.83
DDX49-205ENST00000596502 CUX1P39880 1505 aa26.49■■□□□ 1.83
DDX49-205ENST00000596502 WDR97A6NE52 1622 aa26.47■■□□□ 1.83
DDX49-205ENST00000596502 CHMP7Q8WUX9 453 aaPredicted RBP26.46■■□□□ 1.83
DDX49-205ENST00000596502 CLASP1Q7Z460 1538 aa26.41■■□□□ 1.82
DDX49-205ENST00000596502 GRIN2BQ13224 1484 aa26.4■■□□□ 1.82
DDX49-205ENST00000596502 MAGI1Q96QZ7 1491 aaPredicted RBP26.4■■□□□ 1.82
DDX49-205ENST00000596502 SYNJ1O43426 1573 aa26.39■■□□□ 1.82
DDX49-205ENST00000596502 SYNJ2O15056 1496 aa26.33■■□□□ 1.81
DDX49-205ENST00000596502 PBRM1Q86U86 1689 aa26.33■■□□□ 1.81
DDX49-205ENST00000596502 GAPVD1Q14C86 1478 aa26.3■■□□□ 1.8
DDX49-205ENST00000596502 SUPT5HO00267 1087 aaKnown RBP26.23■■□□□ 1.79
DDX49-205ENST00000596502 ABCA10Q8WWZ4 1543 aa26.2■■□□□ 1.79
DDX49-205ENST00000596502 ABCA5Q8WWZ7 1642 aa26.19■■□□□ 1.78
DDX49-205ENST00000596502 WRNQ14191 1432 aaPredicted RBP eCLIP26.07■■□□□ 1.76
DDX49-205ENST00000596502 GRIN2AQ12879 1464 aa26.06■■□□□ 1.76
DDX49-205ENST00000596502 ERCC6L2Q5T890 1561 aa26.03■■□□□ 1.76
DDX49-205ENST00000596502 ADAMTS12P58397 1594 aa26.02■■□□□ 1.76
DDX49-205ENST00000596502 TOP2BQ02880 1626 aa26■■□□□ 1.75
DDX49-205ENST00000596502 BIVM-ERCC5R4GMW8 1640 aa26■■□□□ 1.75
DDX49-205ENST00000596502 CEP170Q5SW79 1584 aa25.99■■□□□ 1.75
DDX49-205ENST00000596502 NUP160Q12769 1436 aa25.96■■□□□ 1.75
DDX49-205ENST00000596502 FHAD1B1AJZ9 1412 aa25.93■■□□□ 1.74
DDX49-205ENST00000596502 AEBP2Q6ZN18 517 aaPredicted RBP25.9■■□□□ 1.74
DDX49-205ENST00000596502 SHROOM2Q13796 1616 aa25.88■■□□□ 1.73
DDX49-205ENST00000596502 ERICH3Q5RHP9 1530 aa25.88■■□□□ 1.73
DDX49-205ENST00000596502 PRG4Q92954 1404 aaPredicted RBP25.77■■□□□ 1.72
DDX49-205ENST00000596502 JPH4Q96JJ6 628 aa25.75■■□□□ 1.71
DDX49-205ENST00000596502 KIF13AQ9H1H9 1805 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms