RNA–Protein interactions for RNA: ENST00000596386.1

PSMC4-204, Transcript of proteasome 26S subunit, ATPase 4, humanhuman

TSL 2

Gene PSMC4, Length 929 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC4-204ENST00000596386 NISCHQ9Y2I1 1504 aa39.32■■■■□ 3.89
PSMC4-204ENST00000596386 CCDC180Q9P1Z9 1646 aa35.28■■■■□ 3.24
PSMC4-204ENST00000596386 ABCC9O60706 1549 aa35.13■■■■□ 3.21
PSMC4-204ENST00000596386 RB1CC1Q8TDY2 1594 aa33.51■■■□□ 2.96
PSMC4-204ENST00000596386 NACADO15069 1562 aa33.31■■■□□ 2.92
PSMC4-204ENST00000596386 DCAF8L2P0C7V8 631 aa33.05■■■□□ 2.88
PSMC4-204ENST00000596386 MYO15BQ96JP2 1530 aa32.92■■■□□ 2.86
PSMC4-204ENST00000596386 DNAJC5BQ9UF47 199 aa32.83■■■□□ 2.85
PSMC4-204ENST00000596386 UNC13AQ9UPW8 1703 aa32.75■■■□□ 2.83
PSMC4-204ENST00000596386 PABPN1Q86U42 306 aaKnown RBP eCLIP32.69■■■□□ 2.82
PSMC4-204ENST00000596386 ZCCHC6Q5VYS8 1495 aaKnown RBP32.63■■■□□ 2.81
PSMC4-204ENST00000596386 BICRAQ9NZM4 1560 aa32.53■■■□□ 2.8
PSMC4-204ENST00000596386 DCAF1Q9Y4B6 1507 aa32.52■■■□□ 2.8
PSMC4-204ENST00000596386 SHROOM4Q9ULL8 1493 aa32.16■■■□□ 2.74
PSMC4-204ENST00000596386 SCRIBQ14160 1630 aa32.11■■■□□ 2.73
PSMC4-204ENST00000596386 CC2D2AQ9P2K1 1620 aa31.76■■■□□ 2.67
PSMC4-204ENST00000596386 EIF4G1Q04637 1599 aaKnown RBP31.73■■■□□ 2.67
PSMC4-204ENST00000596386 CECR2Q9BXF3 1484 aa31.65■■■□□ 2.66
PSMC4-204ENST00000596386 NCAPD3P42695 1498 aa30.75■■■□□ 2.51
PSMC4-204ENST00000596386 SMARCA4P51532 1647 aa30.66■■■□□ 2.5
PSMC4-204ENST00000596386 ATAD2BQ9ULI0 1458 aa30.66■■■□□ 2.5
PSMC4-204ENST00000596386 SMARCA2P51531 1590 aa30.6■■■□□ 2.49
PSMC4-204ENST00000596386 HMGXB3Q12766 1538 aa30.56■■■□□ 2.48
PSMC4-204ENST00000596386 BAZ1AQ9NRL2 1556 aaPredicted RBP30.53■■■□□ 2.48
PSMC4-204ENST00000596386 PEG3Q9GZU2 1588 aa30.39■■■□□ 2.46
PSMC4-204ENST00000596386 BAZ1BQ9UIG0 1483 aaKnown RBP30.38■■■□□ 2.45
PSMC4-204ENST00000596386 ERCC6Q03468 1493 aa30.34■■■□□ 2.45
PSMC4-204ENST00000596386 MROH2BQ7Z745 1585 aa30.29■■■□□ 2.44
PSMC4-204ENST00000596386 CUX2O14529 1486 aa30.28■■■□□ 2.44
PSMC4-204ENST00000596386 NESP48681 1621 aa30.21■■■□□ 2.43
PSMC4-204ENST00000596386 DNAJC5Q9H3Z4 198 aa30.1■■■□□ 2.41
PSMC4-204ENST00000596386 LAMC3Q9Y6N6 1575 aa30.05■■■□□ 2.4
PSMC4-204ENST00000596386 THOC2Q8NI27 1593 aaKnown RBP29.93■■■□□ 2.38
PSMC4-204ENST00000596386 WIZO95785 1651 aa29.92■■■□□ 2.38
PSMC4-204ENST00000596386 PDS5BQ9NTI5 1447 aa29.86■■■□□ 2.37
PSMC4-204ENST00000596386 KIF21AQ7Z4S6 1674 aa29.85■■■□□ 2.37
PSMC4-204ENST00000596386 CADPSQ9ULU8 1353 aa29.8■■■□□ 2.36
PSMC4-204ENST00000596386 RSF1Q96T23 1441 aaPredicted RBP29.7■■■□□ 2.34
PSMC4-204ENST00000596386 MRC2Q9UBG0 1479 aa29.61■■■□□ 2.33
PSMC4-204ENST00000596386 TOP2AP11388 1531 aaKnown RBP29.58■■■□□ 2.33
PSMC4-204ENST00000596386 WDR62O43379 1518 aa29.55■■■□□ 2.32
PSMC4-204ENST00000596386 CFTRP13569 1480 aa29.5■■■□□ 2.31
PSMC4-204ENST00000596386 CEP164Q9UPV0 1460 aa29.5■■■□□ 2.31
PSMC4-204ENST00000596386 FANCD2Q9BXW9 1451 aa29.47■■■□□ 2.31
PSMC4-204ENST00000596386 URB2Q14146 1524 aaKnown RBP29.23■■■□□ 2.27
PSMC4-204ENST00000596386 PRDM2Q13029 1718 aa29.23■■■□□ 2.27
PSMC4-204ENST00000596386 CCDC88BA6NC98 1476 aa29.22■■■□□ 2.27
PSMC4-204ENST00000596386 TOPBP1Q92547 1522 aa28.93■■■□□ 2.22
PSMC4-204ENST00000596386 IFT140Q96RY7 1462 aa28.91■■■□□ 2.22
PSMC4-204ENST00000596386 ABCC8Q09428 1581 aa28.88■■■□□ 2.21
PSMC4-204ENST00000596386 OSCARQ8IYS5 282 aa28.86■■■□□ 2.21
PSMC4-204ENST00000596386 ZNF608Q9ULD9 1512 aaPredicted RBP28.84■■■□□ 2.21
PSMC4-204ENST00000596386 DNMBPQ6XZF7 1577 aa28.84■■■□□ 2.21
PSMC4-204ENST00000596386 TRIM41Q8WV44 630 aa28.79■■■□□ 2.2
PSMC4-204ENST00000596386 EIF4G3O43432 1585 aaKnown RBP28.71■■■□□ 2.19
PSMC4-204ENST00000596386 TARBP1Q13395 1621 aaKnown RBP28.68■■■□□ 2.18
PSMC4-204ENST00000596386 POLA1P09884 1462 aaPredicted RBP28.65■■■□□ 2.18
PSMC4-204ENST00000596386 AQRO60306 1485 aaKnown RBP eCLIP28.57■■■□□ 2.164e-7■■■■□ 25.7
PSMC4-204ENST00000596386 RAD54L2Q9Y4B4 1467 aa28.51■■■□□ 2.15
PSMC4-204ENST00000596386 RIMBP3CA6NJZ7 1639 aa28.51■■■□□ 2.15
PSMC4-204ENST00000596386 RIMBP3BA6NNM3 1639 aa28.51■■■□□ 2.15
PSMC4-204ENST00000596386 RIMBP3Q9UFD9 1639 aa28.51■■■□□ 2.15
PSMC4-204ENST00000596386 SOGA1O94964 1423 aa28.48■■■□□ 2.15
PSMC4-204ENST00000596386 FGD5Q6ZNL6 1462 aa28.47■■■□□ 2.15
PSMC4-204ENST00000596386 CHD1O14646 1710 aa28.46■■■□□ 2.15
PSMC4-204ENST00000596386 CUX1P39880 1505 aa28.46■■■□□ 2.15
PSMC4-204ENST00000596386 ARHGEF11O15085 1522 aa28.44■■■□□ 2.14
PSMC4-204ENST00000596386 WDR97A6NE52 1622 aa28.42■■■□□ 2.14
PSMC4-204ENST00000596386 TDRD9Q8NDG6 1382 aaKnown RBP28.41■■■□□ 2.14
PSMC4-204ENST00000596386 SUPT5HO00267 1087 aaKnown RBP28.38■■■□□ 2.13
PSMC4-204ENST00000596386 FBLN2P98095 1184 aa28.33■■■□□ 2.13
PSMC4-204ENST00000596386 SNAPC4Q5SXM2 1469 aa28.31■■■□□ 2.12
PSMC4-204ENST00000596386 MAGI1Q96QZ7 1491 aaPredicted RBP28.26■■■□□ 2.11
PSMC4-204ENST00000596386 GRIN2BQ13224 1484 aa28.25■■■□□ 2.11
PSMC4-204ENST00000596386 ABCA10Q8WWZ4 1543 aa28.17■■■□□ 2.1
PSMC4-204ENST00000596386 GAPVD1Q14C86 1478 aa28.16■■■□□ 2.1
PSMC4-204ENST00000596386 ARAP1Q96P48 1450 aa28.16■■■□□ 2.1
PSMC4-204ENST00000596386 CYB5RLQ6IPT4 315 aa28.16■■■□□ 2.1
PSMC4-204ENST00000596386 CHMP7Q8WUX9 453 aaPredicted RBP28.16■■■□□ 2.1
PSMC4-204ENST00000596386 CLASP1Q7Z460 1538 aa28.16■■■□□ 2.1
PSMC4-204ENST00000596386 SYNJ2O15056 1496 aa28.15■■■□□ 2.1
PSMC4-204ENST00000596386 PBRM1Q86U86 1689 aa28.15■■■□□ 2.1
PSMC4-204ENST00000596386 SYNJ1O43426 1573 aa28.14■■■□□ 2.1
PSMC4-204ENST00000596386 ABCA5Q8WWZ7 1642 aa28.12■■■□□ 2.09
PSMC4-204ENST00000596386 WRNQ14191 1432 aaPredicted RBP eCLIP28.06■■■□□ 2.08
PSMC4-204ENST00000596386 BIVM-ERCC5R4GMW8 1640 aa28.05■■■□□ 2.08
PSMC4-204ENST00000596386 TOP2BQ02880 1626 aa28.04■■■□□ 2.08
PSMC4-204ENST00000596386 ADAMTS12P58397 1594 aa27.9■■■□□ 2.06
PSMC4-204ENST00000596386 GRIN2AQ12879 1464 aa27.89■■■□□ 2.06
PSMC4-204ENST00000596386 FHAD1B1AJZ9 1412 aa27.82■■■□□ 2.04
PSMC4-204ENST00000596386 ERICH3Q5RHP9 1530 aa27.82■■■□□ 2.04
PSMC4-204ENST00000596386 TRHP20396 242 aaPredicted RBP27.81■■■□□ 2.04
PSMC4-204ENST00000596386 NUP160Q12769 1436 aa27.81■■■□□ 2.04
PSMC4-204ENST00000596386 CEP170Q5SW79 1584 aa27.79■■■□□ 2.04
PSMC4-204ENST00000596386 ERCC6L2Q5T890 1561 aa27.69■■■□□ 2.02
PSMC4-204ENST00000596386 SHROOM2Q13796 1616 aa27.68■■■□□ 2.02
PSMC4-204ENST00000596386 RUSC2Q8N2Y8 1516 aa27.51■■■□□ 2
PSMC4-204ENST00000596386 PRG4Q92954 1404 aaPredicted RBP27.5■■□□□ 1.99
PSMC4-204ENST00000596386 KIF27Q86VH2 1401 aa27.49■■□□□ 1.99
PSMC4-204ENST00000596386 JPH4Q96JJ6 628 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms