RNA–Protein interactions for RNA: ENST00000596380.5

USF2-208, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 3

Gene USF2, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-208ENST00000596380 NISCHQ9Y2I1 1504 aa40.33■■■■■ 4.05
USF2-208ENST00000596380 CCDC180Q9P1Z9 1646 aa35.82■■■■□ 3.32
USF2-208ENST00000596380 ABCC9O60706 1549 aa34.75■■■■□ 3.15
USF2-208ENST00000596380 NACADO15069 1562 aa33.69■■■□□ 2.98
USF2-208ENST00000596380 RB1CC1Q8TDY2 1594 aa33.64■■■□□ 2.98
USF2-208ENST00000596380 MYO15BQ96JP2 1530 aa33.63■■■□□ 2.97
USF2-208ENST00000596380 ZCCHC6Q5VYS8 1495 aaKnown RBP33.62■■■□□ 2.97
USF2-208ENST00000596380 DCAF8L2P0C7V8 631 aa33.55■■■□□ 2.96
USF2-208ENST00000596380 DCAF1Q9Y4B6 1507 aa33.5■■■□□ 2.95
USF2-208ENST00000596380 UNC13AQ9UPW8 1703 aa32.68■■■□□ 2.82
USF2-208ENST00000596380 SCRIBQ14160 1630 aa32.52■■■□□ 2.8
USF2-208ENST00000596380 BICRAQ9NZM4 1560 aa32.51■■■□□ 2.79
USF2-208ENST00000596380 PABPN1Q86U42 306 aaKnown RBP eCLIP32.5■■■□□ 2.79
USF2-208ENST00000596380 SHROOM4Q9ULL8 1493 aa32.44■■■□□ 2.78
USF2-208ENST00000596380 DNAJC5BQ9UF47 199 aa31.73■■■□□ 2.67
USF2-208ENST00000596380 EIF4G1Q04637 1599 aaKnown RBP31.68■■■□□ 2.66
USF2-208ENST00000596380 CC2D2AQ9P2K1 1620 aa31.47■■■□□ 2.63
USF2-208ENST00000596380 CECR2Q9BXF3 1484 aa31.29■■■□□ 2.6
USF2-208ENST00000596380 BAZ1AQ9NRL2 1556 aaPredicted RBP31.28■■■□□ 2.6
USF2-208ENST00000596380 SMARCA4P51532 1647 aa31.22■■■□□ 2.59
USF2-208ENST00000596380 NCAPD3P42695 1498 aa31.09■■■□□ 2.57
USF2-208ENST00000596380 SMARCA2P51531 1590 aa31.09■■■□□ 2.57
USF2-208ENST00000596380 ATAD2BQ9ULI0 1458 aa31.05■■■□□ 2.56
USF2-208ENST00000596380 PEG3Q9GZU2 1588 aa31.01■■■□□ 2.56
USF2-208ENST00000596380 MROH2BQ7Z745 1585 aa31■■■□□ 2.55
USF2-208ENST00000596380 HMGXB3Q12766 1538 aa30.92■■■□□ 2.54
USF2-208ENST00000596380 BAZ1BQ9UIG0 1483 aaKnown RBP30.81■■■□□ 2.52
USF2-208ENST00000596380 RSF1Q96T23 1441 aaPredicted RBP30.78■■■□□ 2.52
USF2-208ENST00000596380 WIZO95785 1651 aa30.63■■■□□ 2.49
USF2-208ENST00000596380 TOP2AP11388 1531 aaKnown RBP30.42■■■□□ 2.46
USF2-208ENST00000596380 LAMC3Q9Y6N6 1575 aa30.21■■■□□ 2.43
USF2-208ENST00000596380 CADPSQ9ULU8 1353 aa30.17■■■□□ 2.42
USF2-208ENST00000596380 NESP48681 1621 aa30.08■■■□□ 2.41
USF2-208ENST00000596380 PDS5BQ9NTI5 1447 aa30.05■■■□□ 2.4
USF2-208ENST00000596380 CCDC88BA6NC98 1476 aa30.05■■■□□ 2.4
USF2-208ENST00000596380 ERCC6Q03468 1493 aa30.02■■■□□ 2.4
USF2-208ENST00000596380 SUPT5HO00267 1087 aaKnown RBP30.02■■■□□ 2.4
USF2-208ENST00000596380 CFTRP13569 1480 aa30.01■■■□□ 2.4
USF2-208ENST00000596380 FANCD2Q9BXW9 1451 aa29.76■■■□□ 2.35
USF2-208ENST00000596380 CUX2O14529 1486 aa29.74■■■□□ 2.35
USF2-208ENST00000596380 KIF21AQ7Z4S6 1674 aa29.73■■■□□ 2.35
USF2-208ENST00000596380 CEP164Q9UPV0 1460 aa29.73■■■□□ 2.35
USF2-208ENST00000596380 PRDM2Q13029 1718 aa29.71■■■□□ 2.35
USF2-208ENST00000596380 MRC2Q9UBG0 1479 aa29.65■■■□□ 2.34
USF2-208ENST00000596380 THOC2Q8NI27 1593 aaKnown RBP29.64■■■□□ 2.34
USF2-208ENST00000596380 WDR62O43379 1518 aa29.54■■■□□ 2.32
USF2-208ENST00000596380 ABCC8Q09428 1581 aa29.47■■■□□ 2.31
USF2-208ENST00000596380 URB2Q14146 1524 aaKnown RBP29.4■■■□□ 2.3
USF2-208ENST00000596380 DNMBPQ6XZF7 1577 aa29.29■■■□□ 2.28
USF2-208ENST00000596380 TOPBP1Q92547 1522 aa29.29■■■□□ 2.28
USF2-208ENST00000596380 IFT140Q96RY7 1462 aa29.14■■■□□ 2.26
USF2-208ENST00000596380 CUX1P39880 1505 aa29.08■■■□□ 2.25
USF2-208ENST00000596380 POLA1P09884 1462 aaPredicted RBP29.04■■■□□ 2.24
USF2-208ENST00000596380 WRNQ14191 1432 aaPredicted RBP eCLIP29.03■■■□□ 2.24
USF2-208ENST00000596380 SOGA1O94964 1423 aa28.98■■■□□ 2.23
USF2-208ENST00000596380 FGD5Q6ZNL6 1462 aa28.97■■■□□ 2.23
USF2-208ENST00000596380 TOP2BQ02880 1626 aa28.94■■■□□ 2.22
USF2-208ENST00000596380 TARBP1Q13395 1621 aaKnown RBP28.94■■■□□ 2.22
USF2-208ENST00000596380 BIVM-ERCC5R4GMW8 1640 aa28.91■■■□□ 2.22
USF2-208ENST00000596380 WDR97A6NE52 1622 aa28.88■■■□□ 2.21
USF2-208ENST00000596380 RAD54L2Q9Y4B4 1467 aa28.85■■■□□ 2.21
USF2-208ENST00000596380 ZNF608Q9ULD9 1512 aaPredicted RBP28.84■■■□□ 2.21
USF2-208ENST00000596380 SYNJ1O43426 1573 aa28.84■■■□□ 2.21
USF2-208ENST00000596380 ABCA10Q8WWZ4 1543 aa28.78■■■□□ 2.2
USF2-208ENST00000596380 EIF4G3O43432 1585 aaKnown RBP28.75■■■□□ 2.19
USF2-208ENST00000596380 AQRO60306 1485 aaKnown RBP eCLIP28.74■■■□□ 2.191e-6■□□□□ 9.4
USF2-208ENST00000596380 TDRD9Q8NDG6 1382 aaKnown RBP28.73■■■□□ 2.19
USF2-208ENST00000596380 GRIN2BQ13224 1484 aa28.64■■■□□ 2.17
USF2-208ENST00000596380 GAPVD1Q14C86 1478 aa28.64■■■□□ 2.17
USF2-208ENST00000596380 DNAJC5Q9H3Z4 198 aa28.62■■■□□ 2.17
USF2-208ENST00000596380 ABCA5Q8WWZ7 1642 aa28.58■■■□□ 2.17
USF2-208ENST00000596380 MAGI1Q96QZ7 1491 aaPredicted RBP28.57■■■□□ 2.16
USF2-208ENST00000596380 OSCARQ8IYS5 282 aa28.56■■■□□ 2.16
USF2-208ENST00000596380 SNAPC4Q5SXM2 1469 aa28.48■■■□□ 2.15
USF2-208ENST00000596380 TRIM41Q8WV44 630 aa28.48■■■□□ 2.15
USF2-208ENST00000596380 KIF27Q86VH2 1401 aa28.47■■■□□ 2.15
USF2-208ENST00000596380 ERICH3Q5RHP9 1530 aa28.47■■■□□ 2.15
USF2-208ENST00000596380 PBRM1Q86U86 1689 aa28.45■■■□□ 2.15
USF2-208ENST00000596380 SYNJ2O15056 1496 aa28.43■■■□□ 2.14
USF2-208ENST00000596380 CHMP7Q8WUX9 453 aaPredicted RBP28.43■■■□□ 2.14
USF2-208ENST00000596380 FBLN2P98095 1184 aa28.38■■■□□ 2.13
USF2-208ENST00000596380 FHAD1B1AJZ9 1412 aa28.35■■■□□ 2.13
USF2-208ENST00000596380 CHD1O14646 1710 aa28.32■■■□□ 2.12
USF2-208ENST00000596380 IGF1RP08069 1367 aa28.3■■■□□ 2.12
USF2-208ENST00000596380 ADAMTS12P58397 1594 aa28.28■■■□□ 2.12
USF2-208ENST00000596380 GRIN2AQ12879 1464 aa28.23■■■□□ 2.11
USF2-208ENST00000596380 CUL7Q14999 1698 aa28.2■■■□□ 2.11
USF2-208ENST00000596380 CHIC1Q5VXU3 224 aa28.18■■■□□ 2.1
USF2-208ENST00000596380 CARMIL1Q5VZK9 1371 aa28.14■■■□□ 2.1
USF2-208ENST00000596380 NUP160Q12769 1436 aa28.13■■■□□ 2.09
USF2-208ENST00000596380 CLASP1Q7Z460 1538 aa28.11■■■□□ 2.09
USF2-208ENST00000596380 EEA1Q15075 1411 aa28.09■■■□□ 2.09
USF2-208ENST00000596380 RUSC2Q8N2Y8 1516 aa28.05■■■□□ 2.08
USF2-208ENST00000596380 CEP170Q5SW79 1584 aa28■■■□□ 2.07
USF2-208ENST00000596380 RAPGEF2Q9Y4G8 1499 aa27.99■■■□□ 2.07
USF2-208ENST00000596380 CSRNP3Q8WYN3 585 aa27.97■■■□□ 2.07
USF2-208ENST00000596380 ARHGEF11O15085 1522 aa27.97■■■□□ 2.07
USF2-208ENST00000596380 KIAA0586Q9BVV6 1533 aa27.93■■■□□ 2.06
USF2-208ENST00000596380 PRXQ9BXM0 1461 aa27.92■■■□□ 2.06
USF2-208ENST00000596380 RIMBP3CA6NJZ7 1639 aa27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms