RNA–Protein interactions for RNA: ENST00000596216.1

RAB4B-EGLN2-202, Transcript of RAB4B-EGLN2 readthrough (NMD candidate), humanhuman

TSL 3

Gene RAB4B-EGLN2, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-EGLN2-202ENST00000596216 NISCHQ9Y2I1 1504 aa32.78■■■□□ 2.84
RAB4B-EGLN2-202ENST00000596216 CCDC180Q9P1Z9 1646 aa29.28■■■□□ 2.28
RAB4B-EGLN2-202ENST00000596216 ABCC9O60706 1549 aa29.15■■■□□ 2.26
RAB4B-EGLN2-202ENST00000596216 RB1CC1Q8TDY2 1594 aa27.81■■■□□ 2.04
RAB4B-EGLN2-202ENST00000596216 NACADO15069 1562 aa27.67■■■□□ 2.02
RAB4B-EGLN2-202ENST00000596216 DCAF8L2P0C7V8 631 aa27.63■■■□□ 2.01
RAB4B-EGLN2-202ENST00000596216 MYO15BQ96JP2 1530 aa27.35■■□□□ 1.97
RAB4B-EGLN2-202ENST00000596216 ZCCHC6Q5VYS8 1495 aaKnown RBP27.2■■□□□ 1.95
RAB4B-EGLN2-202ENST00000596216 DNAJC5BQ9UF47 199 aa27.2■■□□□ 1.94
RAB4B-EGLN2-202ENST00000596216 PABPN1Q86U42 306 aaKnown RBP eCLIP27.19■■□□□ 1.94
RAB4B-EGLN2-202ENST00000596216 UNC13AQ9UPW8 1703 aa27.13■■□□□ 1.93
RAB4B-EGLN2-202ENST00000596216 DCAF1Q9Y4B6 1507 aa27.07■■□□□ 1.92
RAB4B-EGLN2-202ENST00000596216 BICRAQ9NZM4 1560 aa27■■□□□ 1.91
RAB4B-EGLN2-202ENST00000596216 SCRIBQ14160 1630 aa26.72■■□□□ 1.87
RAB4B-EGLN2-202ENST00000596216 SHROOM4Q9ULL8 1493 aa26.63■■□□□ 1.85
RAB4B-EGLN2-202ENST00000596216 CC2D2AQ9P2K1 1620 aa26.32■■□□□ 1.8
RAB4B-EGLN2-202ENST00000596216 EIF4G1Q04637 1599 aaKnown RBP26.31■■□□□ 1.8
RAB4B-EGLN2-202ENST00000596216 CECR2Q9BXF3 1484 aa26.23■■□□□ 1.79
RAB4B-EGLN2-202ENST00000596216 NCAPD3P42695 1498 aa25.56■■□□□ 1.68
RAB4B-EGLN2-202ENST00000596216 ATAD2BQ9ULI0 1458 aa25.51■■□□□ 1.67
RAB4B-EGLN2-202ENST00000596216 SMARCA4P51532 1647 aa25.51■■□□□ 1.67
RAB4B-EGLN2-202ENST00000596216 SMARCA2P51531 1590 aa25.44■■□□□ 1.66
RAB4B-EGLN2-202ENST00000596216 BAZ1AQ9NRL2 1556 aaPredicted RBP25.42■■□□□ 1.66
RAB4B-EGLN2-202ENST00000596216 HMGXB3Q12766 1538 aa25.37■■□□□ 1.65
RAB4B-EGLN2-202ENST00000596216 MROH2BQ7Z745 1585 aa25.27■■□□□ 1.64
RAB4B-EGLN2-202ENST00000596216 BAZ1BQ9UIG0 1483 aaKnown RBP25.26■■□□□ 1.63
RAB4B-EGLN2-202ENST00000596216 PEG3Q9GZU2 1588 aa25.26■■□□□ 1.63
RAB4B-EGLN2-202ENST00000596216 ERCC6Q03468 1493 aa25.14■■□□□ 1.61
RAB4B-EGLN2-202ENST00000596216 NESP48681 1621 aa25.09■■□□□ 1.61
RAB4B-EGLN2-202ENST00000596216 CUX2O14529 1486 aa25.02■■□□□ 1.6
RAB4B-EGLN2-202ENST00000596216 WIZO95785 1651 aa24.95■■□□□ 1.58
RAB4B-EGLN2-202ENST00000596216 LAMC3Q9Y6N6 1575 aa24.93■■□□□ 1.58
RAB4B-EGLN2-202ENST00000596216 RSF1Q96T23 1441 aaPredicted RBP24.82■■□□□ 1.56
RAB4B-EGLN2-202ENST00000596216 DNAJC5Q9H3Z4 198 aa24.82■■□□□ 1.56
RAB4B-EGLN2-202ENST00000596216 CADPSQ9ULU8 1353 aa24.8■■□□□ 1.56
RAB4B-EGLN2-202ENST00000596216 PDS5BQ9NTI5 1447 aa24.8■■□□□ 1.56
RAB4B-EGLN2-202ENST00000596216 THOC2Q8NI27 1593 aaKnown RBP24.77■■□□□ 1.56
RAB4B-EGLN2-202ENST00000596216 KIF21AQ7Z4S6 1674 aa24.74■■□□□ 1.55
RAB4B-EGLN2-202ENST00000596216 TOP2AP11388 1531 aaKnown RBP24.66■■□□□ 1.54
RAB4B-EGLN2-202ENST00000596216 MRC2Q9UBG0 1479 aa24.57■■□□□ 1.52
RAB4B-EGLN2-202ENST00000596216 CFTRP13569 1480 aa24.55■■□□□ 1.52
RAB4B-EGLN2-202ENST00000596216 FANCD2Q9BXW9 1451 aa24.51■■□□□ 1.51
RAB4B-EGLN2-202ENST00000596216 CEP164Q9UPV0 1460 aa24.51■■□□□ 1.51
RAB4B-EGLN2-202ENST00000596216 WDR62O43379 1518 aa24.49■■□□□ 1.51
RAB4B-EGLN2-202ENST00000596216 CCDC88BA6NC98 1476 aa24.4■■□□□ 1.5
RAB4B-EGLN2-202ENST00000596216 URB2Q14146 1524 aaKnown RBP24.3■■□□□ 1.48
RAB4B-EGLN2-202ENST00000596216 PRDM2Q13029 1718 aa24.25■■□□□ 1.47
RAB4B-EGLN2-202ENST00000596216 TOPBP1Q92547 1522 aa24.06■■□□□ 1.44
RAB4B-EGLN2-202ENST00000596216 ABCC8Q09428 1581 aa24.02■■□□□ 1.44
RAB4B-EGLN2-202ENST00000596216 IFT140Q96RY7 1462 aa24.01■■□□□ 1.43
RAB4B-EGLN2-202ENST00000596216 DNMBPQ6XZF7 1577 aa23.98■■□□□ 1.43
RAB4B-EGLN2-202ENST00000596216 ZNF608Q9ULD9 1512 aaPredicted RBP23.96■■□□□ 1.43
RAB4B-EGLN2-202ENST00000596216 OSCARQ8IYS5 282 aa23.95■■□□□ 1.42
RAB4B-EGLN2-202ENST00000596216 SUPT5HO00267 1087 aaKnown RBP23.91■■□□□ 1.42
RAB4B-EGLN2-202ENST00000596216 POLA1P09884 1462 aaPredicted RBP23.83■■□□□ 1.41
RAB4B-EGLN2-202ENST00000596216 TARBP1Q13395 1621 aaKnown RBP23.82■■□□□ 1.4
RAB4B-EGLN2-202ENST00000596216 TRIM41Q8WV44 630 aa23.82■■□□□ 1.4
RAB4B-EGLN2-202ENST00000596216 EIF4G3O43432 1585 aaKnown RBP23.81■■□□□ 1.4
RAB4B-EGLN2-202ENST00000596216 AQRO60306 1485 aaKnown RBP eCLIP23.78■■□□□ 1.4
RAB4B-EGLN2-202ENST00000596216 RAD54L2Q9Y4B4 1467 aa23.75■■□□□ 1.39
RAB4B-EGLN2-202ENST00000596216 SOGA1O94964 1423 aa23.75■■□□□ 1.39
RAB4B-EGLN2-202ENST00000596216 CUX1P39880 1505 aa23.72■■□□□ 1.39
RAB4B-EGLN2-202ENST00000596216 FGD5Q6ZNL6 1462 aa23.71■■□□□ 1.39
RAB4B-EGLN2-202ENST00000596216 TDRD9Q8NDG6 1382 aaKnown RBP23.68■■□□□ 1.38
RAB4B-EGLN2-202ENST00000596216 FBLN2P98095 1184 aa23.61■■□□□ 1.37
RAB4B-EGLN2-202ENST00000596216 CHD1O14646 1710 aa23.59■■□□□ 1.37
RAB4B-EGLN2-202ENST00000596216 RIMBP3CA6NJZ7 1639 aa23.58■■□□□ 1.36
RAB4B-EGLN2-202ENST00000596216 RIMBP3BA6NNM3 1639 aa23.58■■□□□ 1.36
RAB4B-EGLN2-202ENST00000596216 RIMBP3Q9UFD9 1639 aa23.58■■□□□ 1.36
RAB4B-EGLN2-202ENST00000596216 WDR97A6NE52 1622 aa23.57■■□□□ 1.36
RAB4B-EGLN2-202ENST00000596216 ARHGEF11O15085 1522 aa23.54■■□□□ 1.36
RAB4B-EGLN2-202ENST00000596216 SNAPC4Q5SXM2 1469 aa23.53■■□□□ 1.36
RAB4B-EGLN2-202ENST00000596216 GRIN2BQ13224 1484 aa23.5■■□□□ 1.35
RAB4B-EGLN2-202ENST00000596216 MAGI1Q96QZ7 1491 aaPredicted RBP23.47■■□□□ 1.35
RAB4B-EGLN2-202ENST00000596216 CHMP7Q8WUX9 453 aaPredicted RBP23.46■■□□□ 1.35
RAB4B-EGLN2-202ENST00000596216 ABCA10Q8WWZ4 1543 aa23.46■■□□□ 1.35
RAB4B-EGLN2-202ENST00000596216 GAPVD1Q14C86 1478 aa23.44■■□□□ 1.34
RAB4B-EGLN2-202ENST00000596216 WRNQ14191 1432 aaPredicted RBP eCLIP23.41■■□□□ 1.34
RAB4B-EGLN2-202ENST00000596216 SYNJ2O15056 1496 aa23.39■■□□□ 1.34
RAB4B-EGLN2-202ENST00000596216 CYB5RLQ6IPT4 315 aa23.38■■□□□ 1.33
RAB4B-EGLN2-202ENST00000596216 PBRM1Q86U86 1689 aa23.38■■□□□ 1.33
RAB4B-EGLN2-202ENST00000596216 TOP2BQ02880 1626 aa23.37■■□□□ 1.33
RAB4B-EGLN2-202ENST00000596216 ABCA5Q8WWZ7 1642 aa23.37■■□□□ 1.33
RAB4B-EGLN2-202ENST00000596216 BIVM-ERCC5R4GMW8 1640 aa23.37■■□□□ 1.33
RAB4B-EGLN2-202ENST00000596216 SYNJ1O43426 1573 aa23.35■■□□□ 1.33
RAB4B-EGLN2-202ENST00000596216 CLASP1Q7Z460 1538 aa23.34■■□□□ 1.33
RAB4B-EGLN2-202ENST00000596216 ARAP1Q96P48 1450 aa23.32■■□□□ 1.32
RAB4B-EGLN2-202ENST00000596216 GRIN2AQ12879 1464 aa23.19■■□□□ 1.3
RAB4B-EGLN2-202ENST00000596216 ADAMTS12P58397 1594 aa23.18■■□□□ 1.3
RAB4B-EGLN2-202ENST00000596216 FHAD1B1AJZ9 1412 aa23.16■■□□□ 1.3
RAB4B-EGLN2-202ENST00000596216 ERICH3Q5RHP9 1530 aa23.16■■□□□ 1.3
RAB4B-EGLN2-202ENST00000596216 NUP160Q12769 1436 aa23.11■■□□□ 1.29
RAB4B-EGLN2-202ENST00000596216 CEP170Q5SW79 1584 aa23.1■■□□□ 1.29
RAB4B-EGLN2-202ENST00000596216 TRHP20396 242 aaPredicted RBP23.06■■□□□ 1.28
RAB4B-EGLN2-202ENST00000596216 ERCC6L2Q5T890 1561 aa23.01■■□□□ 1.27
RAB4B-EGLN2-202ENST00000596216 SHROOM2Q13796 1616 aa22.97■■□□□ 1.27
RAB4B-EGLN2-202ENST00000596216 KIF27Q86VH2 1401 aa22.95■■□□□ 1.26
RAB4B-EGLN2-202ENST00000596216 IGF1RP08069 1367 aa22.94■■□□□ 1.26
RAB4B-EGLN2-202ENST00000596216 JPH4Q96JJ6 628 aa22.91■■□□□ 1.26
RAB4B-EGLN2-202ENST00000596216 PRG4Q92954 1404 aaPredicted RBP22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms